RNA–Protein interactions for RNA: ENST00000505005.5

NR1I3-220, Transcript of nuclear receptor subfamily 1 group I member 3, humanhuman

TSL 1 (best) BASIC

Gene NR1I3, Length 985 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1I3-220ENST00000505005 CNOT4O95628 575 aaKnown RBP8.87□□□□□ -0.99
NR1I3-220ENST00000505005 NTN1O95631 604 aa8.87□□□□□ -0.99
NR1I3-220ENST00000505005 PMS2P2O95744 297 aa8.87□□□□□ -0.99
NR1I3-220ENST00000505005 CHRM4P08173 479 aa8.87□□□□□ -0.99
NR1I3-220ENST00000505005 CD8BP10966 210 aa8.87□□□□□ -0.99
NR1I3-220ENST00000505005 HOXB9P17482 250 aaPredicted RBP8.87□□□□□ -0.99
NR1I3-220ENST00000505005 PSMA4P25789 261 aaKnown RBP8.87□□□□□ -0.99
NR1I3-220ENST00000505005 SSTR2P30874 369 aa8.87□□□□□ -0.99
NR1I3-220ENST00000505005 IDH2P48735 452 aaKnown RBP8.87□□□□□ -0.99
NR1I3-220ENST00000505005 SLC35A1P78382 337 aa8.87□□□□□ -0.99
NR1I3-220ENST00000505005 EPS8Q12929 822 aa8.87□□□□□ -0.99
NR1I3-220ENST00000505005 PDK3Q15120 406 aa8.87□□□□□ -0.99
NR1I3-220ENST00000505005 SYT14P1Q58G82 188 aa8.87□□□□□ -0.99
NR1I3-220ENST00000505005 TMEM201Q5SNT2 666 aa8.87□□□□□ -0.99
NR1I3-220ENST00000505005 SWT1Q5T5J6 900 aaKnown RBP8.87□□□□□ -0.99
NR1I3-220ENST00000505005 NANOGP8Q6NSW7 305 aa8.87□□□□□ -0.99
NR1I3-220ENST00000505005 CBLN3Q6UW01 205 aa8.87□□□□□ -0.99
NR1I3-220ENST00000505005 TMPPEQ6ZT21 453 aa8.87□□□□□ -0.99
NR1I3-220ENST00000505005 FAM214BQ7L5A3 538 aa8.87□□□□□ -0.99
NR1I3-220ENST00000505005 ARMC8Q8IUR7 673 aa8.87□□□□□ -0.99
NR1I3-220ENST00000505005 LSMEM1Q8N8F7 131 aa8.87□□□□□ -0.99
NR1I3-220ENST00000505005 OR6K3Q8NGY3 331 aa8.87□□□□□ -0.99
NR1I3-220ENST00000505005 RNASE6Q93091 150 aaKnown RBP8.87□□□□□ -0.99
NR1I3-220ENST00000505005 EPYCQ99645 322 aa8.87□□□□□ -0.99
NR1I3-220ENST00000505005 ZNF559Q9BR84 538 aa8.87□□□□□ -0.99
NR1I3-220ENST00000505005 TAPBPLQ9BX59 468 aa8.87□□□□□ -0.99
NR1I3-220ENST00000505005 HDHD5Q9BXW7 423 aa8.87□□□□□ -0.99
NR1I3-220ENST00000505005 NANOGQ9H9S0 305 aa8.87□□□□□ -0.99
NR1I3-220ENST00000505005 PARPBPQ9NWS1 579 aa8.87□□□□□ -0.99
NR1I3-220ENST00000505005 DNAJB12Q9NXW2 375 aaKnown RBP8.87□□□□□ -0.99
NR1I3-220ENST00000505005 SLC25A37Q9NYZ2 338 aa8.87□□□□□ -0.99
NR1I3-220ENST00000505005 CLCF1Q9UBD9 225 aa8.87□□□□□ -0.99
NR1I3-220ENST00000505005 Q9UFV3 132 aa8.87□□□□□ -0.99
NR1I3-220ENST00000505005 KCNN3Q9UGI6 736 aa8.87□□□□□ -0.99
NR1I3-220ENST00000505005 TESQ9UGI8 421 aaKnown RBP8.87□□□□□ -0.99
NR1I3-220ENST00000505005 PACSIN3Q9UKS6 424 aa8.87□□□□□ -0.99
NR1I3-220ENST00000505005 SLC9A8Q9Y2E8 581 aa8.87□□□□□ -0.99
NR1I3-220ENST00000505005 NCKAP5O14513 1909 aa8.87□□□□□ -0.99
NR1I3-220ENST00000505005 PCNX1Q96RV3 2341 aa8.87□□□□□ -0.99
NR1I3-220ENST00000505005 LRRK2Q5S007 2527 aa8.87□□□□□ -0.99
NR1I3-220ENST00000505005 NPIPA5A0A0B4J1W7 369 aa8.86□□□□□ -0.99
NR1I3-220ENST00000505005 LOC100653049A0A140TA62 436 aa8.86□□□□□ -0.99
NR1I3-220ENST00000505005 OR6C65A6NJZ3 312 aa8.86□□□□□ -0.99
NR1I3-220ENST00000505005 A8MVM7 634 aa8.86□□□□□ -0.99
NR1I3-220ENST00000505005 NPIPA7E9PJI5 369 aa8.86□□□□□ -0.99
NR1I3-220ENST00000505005 AP3D1O14617 1153 aa8.86□□□□□ -0.99
NR1I3-220ENST00000505005 KRT34O76011 436 aa8.86□□□□□ -0.99
NR1I3-220ENST00000505005 GPIP06744 558 aa8.86□□□□□ -0.99
NR1I3-220ENST00000505005 NPIPA8P0DM63 369 aa8.86□□□□□ -0.99
NR1I3-220ENST00000505005 COX4I1P13073 169 aa8.86□□□□□ -0.99
NR1I3-220ENST00000505005 PPP3CBP16298 524 aa8.86□□□□□ -0.99
NR1I3-220ENST00000505005 ENPP1P22413 925 aa8.86□□□□□ -0.99
NR1I3-220ENST00000505005 RYKP34925 604 aa8.86□□□□□ -0.99
NR1I3-220ENST00000505005 PCGF2P35227 344 aa8.86□□□□□ -0.99
NR1I3-220ENST00000505005 CPA2P48052 419 aa8.86□□□□□ -0.99
NR1I3-220ENST00000505005 STARP49675 285 aa8.86□□□□□ -0.99
NR1I3-220ENST00000505005 CASP9P55211 416 aa8.86□□□□□ -0.99
NR1I3-220ENST00000505005 DMTNQ08495 405 aa8.86□□□□□ -0.99
NR1I3-220ENST00000505005 FUT5Q11128 374 aa8.86□□□□□ -0.99
NR1I3-220ENST00000505005 FOXF1Q12946 379 aa8.86□□□□□ -0.99
NR1I3-220ENST00000505005 CAPRIN1Q14444 709 aaKnown RBP8.86□□□□□ -0.99
NR1I3-220ENST00000505005 PON3Q15166 354 aa8.86□□□□□ -0.99
NR1I3-220ENST00000505005 MAPK14Q16539 360 aa8.86□□□□□ -0.99
NR1I3-220ENST00000505005 VMACQ2NL98 169 aa8.86□□□□□ -0.99
NR1I3-220ENST00000505005 TMEM176BQ3YBM2 270 aaPredicted RBP8.86□□□□□ -0.99
NR1I3-220ENST00000505005 ULK3Q6PHR2 472 aa8.86□□□□□ -0.99
NR1I3-220ENST00000505005 C3P1Q6ZMU1 363 aa8.86□□□□□ -0.99
NR1I3-220ENST00000505005 BEND4Q6ZU67 534 aa8.86□□□□□ -0.99
NR1I3-220ENST00000505005 CCDC121Q6ZUS5 278 aa8.86□□□□□ -0.99
NR1I3-220ENST00000505005 PLEKHM3Q6ZWE6 761 aa8.86□□□□□ -0.99
NR1I3-220ENST00000505005 CCDC80Q76M96 950 aa8.86□□□□□ -0.99
NR1I3-220ENST00000505005 GDF7Q7Z4P5 450 aa8.86□□□□□ -0.99
NR1I3-220ENST00000505005 MTDHQ86UE4 582 aaKnown RBP8.86□□□□□ -0.99
NR1I3-220ENST00000505005 OR10D3Q8NH80 312 aa8.86□□□□□ -0.99
NR1I3-220ENST00000505005 NFKBIDQ8NI38 313 aa8.86□□□□□ -0.99
NR1I3-220ENST00000505005 PIGXQ8TBF5 258 aa8.86□□□□□ -0.99
NR1I3-220ENST00000505005 STK35Q8TDR2 534 aa8.86□□□□□ -0.99
NR1I3-220ENST00000505005 SMPDL3BQ92485 455 aa8.86□□□□□ -0.99
NR1I3-220ENST00000505005 PROX1Q92786 737 aa8.86□□□□□ -0.99
NR1I3-220ENST00000505005 SLC47A1Q96FL8 570 aa8.86□□□□□ -0.99
NR1I3-220ENST00000505005 AURKBQ96GD4 344 aaPredicted RBP8.86□□□□□ -0.99
NR1I3-220ENST00000505005 CPPED1Q9BRF8 314 aaPredicted RBP8.86□□□□□ -0.99
NR1I3-220ENST00000505005 RTN4RQ9BZR6 473 aa8.86□□□□□ -0.99
NR1I3-220ENST00000505005 ADAM19Q9H013 955 aa8.86□□□□□ -0.99
NR1I3-220ENST00000505005 ENKD1Q9H0I2 346 aa8.86□□□□□ -0.99
NR1I3-220ENST00000505005 MYLK2Q9H1R3 596 aa8.86□□□□□ -0.99
NR1I3-220ENST00000505005 OR10A4Q9H209 315 aa8.86□□□□□ -0.99
NR1I3-220ENST00000505005 TMEM181Q9P2C4 612 aa8.86□□□□□ -0.99
NR1I3-220ENST00000505005 KCNE5Q9UJ90 142 aa8.86□□□□□ -0.99
NR1I3-220ENST00000505005 PROCRQ9UNN8 238 aa8.86□□□□□ -0.99
NR1I3-220ENST00000505005 FLNCQ14315 2725 aa8.85□□□□□ -0.99
NR1I3-220ENST00000505005 CASKO14936 926 aa8.85□□□□□ -0.99
NR1I3-220ENST00000505005 WISP2O76076 250 aa8.85□□□□□ -0.99
NR1I3-220ENST00000505005 YES1P07947 543 aa8.85□□□□□ -0.99
NR1I3-220ENST00000505005 TFPIP10646 304 aa8.85□□□□□ -0.99
NR1I3-220ENST00000505005 HOXB6P17509 224 aaKnown RBP8.85□□□□□ -0.99
NR1I3-220ENST00000505005 BMP5P22003 454 aa8.85□□□□□ -0.99
NR1I3-220ENST00000505005 GTF2E2P29084 291 aaKnown RBP8.85□□□□□ -0.99
NR1I3-220ENST00000505005 KRT72Q14CN4 511 aa8.85□□□□□ -0.99
NR1I3-220ENST00000505005 GTDC1Q4AE62 458 aa8.85□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms