RNA–Protein interactions for RNA: ENST00000504807.5

DDX41-204, Transcript of DEAD-box helicase 41, humanhuman

TSL 2

Gene DDX41, Length 794 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-204ENST00000504807 NEURL3Q96EH8 262 aa11.65□□□□□ -0.54
DDX41-204ENST00000504807 PLPPR2Q96GM1 343 aa11.65□□□□□ -0.54
DDX41-204ENST00000504807 MRGPRX4Q96LA9 322 aa11.65□□□□□ -0.54
DDX41-204ENST00000504807 PIP5K1AQ99755 562 aa11.65□□□□□ -0.54
DDX41-204ENST00000504807 LAT2Q9GZY6 243 aa11.65□□□□□ -0.54
DDX41-204ENST00000504807 SAP130Q9H0E3 1048 aa11.65□□□□□ -0.54
DDX41-204ENST00000504807 PAQR5Q9NXK6 330 aaPredicted RBP11.65□□□□□ -0.54
DDX41-204ENST00000504807 GPR45Q9Y5Y3 372 aa11.65□□□□□ -0.54
DDX41-204ENST00000504807 TMEM120BA0PK00 339 aa11.64□□□□□ -0.55
DDX41-204ENST00000504807 E9PBE3 544 aa11.64□□□□□ -0.55
DDX41-204ENST00000504807 ADAP00813 363 aa11.64□□□□□ -0.55
DDX41-204ENST00000504807 GSNP06396 782 aa11.64□□□□□ -0.55
DDX41-204ENST00000504807 UQCRC2P22695 453 aa11.64□□□□□ -0.55
DDX41-204ENST00000504807 MVDP53602 400 aa11.64□□□□□ -0.55
DDX41-204ENST00000504807 CAPRIN1Q14444 709 aaKnown RBP11.64□□□□□ -0.55
DDX41-204ENST00000504807 TAB1Q15750 504 aa11.64□□□□□ -0.55
DDX41-204ENST00000504807 GTDC1Q4AE62 458 aa11.64□□□□□ -0.55
DDX41-204ENST00000504807 SLC9B1Q4ZJI4 515 aa11.64□□□□□ -0.55
DDX41-204ENST00000504807 ALKBH2Q6NS38 261 aa11.64□□□□□ -0.55
DDX41-204ENST00000504807 ZNF704Q6ZNC4 412 aaPredicted RBP11.64□□□□□ -0.55
DDX41-204ENST00000504807 PLEKHM3Q6ZWE6 761 aa11.64□□□□□ -0.55
DDX41-204ENST00000504807 RNF130Q86XS8 419 aa11.64□□□□□ -0.55
DDX41-204ENST00000504807 TOR1AIP2Q8NFQ8 470 aa11.64□□□□□ -0.55
DDX41-204ENST00000504807 PNPT1Q8TCS8 783 aaKnown RBP11.64□□□□□ -0.55
DDX41-204ENST00000504807 CNOT9Q92600 299 aaKnown RBP11.64□□□□□ -0.55
DDX41-204ENST00000504807 ARL5BQ96KC2 179 aa11.64□□□□□ -0.55
DDX41-204ENST00000504807 CCDC115Q96NT0 180 aa11.64□□□□□ -0.55
DDX41-204ENST00000504807 OR5B2Q96R09 309 aa11.64□□□□□ -0.55
DDX41-204ENST00000504807 PAIP2Q9BPZ3 127 aaKnown RBP11.64□□□□□ -0.55
DDX41-204ENST00000504807 SLC35A5Q9BS91 424 aa11.64□□□□□ -0.55
DDX41-204ENST00000504807 C19orf24Q9BVV8 132 aa11.64□□□□□ -0.55
DDX41-204ENST00000504807 CCDC106Q9BWC9 280 aa11.64□□□□□ -0.55
DDX41-204ENST00000504807 OR11A1Q9GZK7 315 aa11.64□□□□□ -0.55
DDX41-204ENST00000504807 SLC38A1Q9H2H9 487 aa11.64□□□□□ -0.55
DDX41-204ENST00000504807 CTPS2Q9NRF8 586 aa11.64□□□□□ -0.55
DDX41-204ENST00000504807 FREM1Q5H8C1 2179 aa11.64□□□□□ -0.55
DDX41-204ENST00000504807 H3BNH8 94 aa11.63□□□□□ -0.55
DDX41-204ENST00000504807 PRKD3O94806 890 aa11.63□□□□□ -0.55
DDX41-204ENST00000504807 CSTAP01040 98 aa11.63□□□□□ -0.55
DDX41-204ENST00000504807 FESP07332 822 aa11.63□□□□□ -0.55
DDX41-204ENST00000504807 KITP10721 976 aa11.63□□□□□ -0.55
DDX41-204ENST00000504807 FOXG1P55316 489 aaPredicted RBP11.63□□□□□ -0.55
DDX41-204ENST00000504807 CBFBQ13951 182 aa11.63□□□□□ -0.55
DDX41-204ENST00000504807 PDSS1Q5T2R2 415 aa11.63□□□□□ -0.55
DDX41-204ENST00000504807 BEND4Q6ZU67 534 aa11.63□□□□□ -0.55
DDX41-204ENST00000504807 C16orf62Q7Z3J2 963 aa11.63□□□□□ -0.55
DDX41-204ENST00000504807 HIPK1Q86Z02 1210 aa11.63□□□□□ -0.55
DDX41-204ENST00000504807 HOMEZQ8IX15 550 aa11.63□□□□□ -0.55
DDX41-204ENST00000504807 CCL19Q99731 98 aa11.63□□□□□ -0.55
DDX41-204ENST00000504807 RSPO3Q9BXY4 272 aaPredicted RBP11.63□□□□□ -0.55
DDX41-204ENST00000504807 BCO1Q9HAY6 547 aa11.63□□□□□ -0.55
DDX41-204ENST00000504807 GLRX2Q9NS18 164 aa11.63□□□□□ -0.55
DDX41-204ENST00000504807 ACER3Q9NUN7 267 aa11.63□□□□□ -0.55
DDX41-204ENST00000504807 BTNL2Q9UIR0 455 aa11.63□□□□□ -0.55
DDX41-204ENST00000504807 WDR45Q9Y484 360 aa11.63□□□□□ -0.55
DDX41-204ENST00000504807 ZNF716A6NP11 495 aa11.62□□□□□ -0.55
DDX41-204ENST00000504807 CYTIPO60759 359 aa11.62□□□□□ -0.55
DDX41-204ENST00000504807 AK1P00568 194 aa11.62□□□□□ -0.55
DDX41-204ENST00000504807 YES1P07947 543 aa11.62□□□□□ -0.55
DDX41-204ENST00000504807 S100A3P33764 101 aa11.62□□□□□ -0.55
DDX41-204ENST00000504807 RYKP34925 604 aa11.62□□□□□ -0.55
DDX41-204ENST00000504807 PTH2RP49190 550 aa11.62□□□□□ -0.55
DDX41-204ENST00000504807 DIO1P49895 249 aa11.62□□□□□ -0.55
DDX41-204ENST00000504807 RAC3P60763 192 aa11.62□□□□□ -0.55
DDX41-204ENST00000504807 MERTKQ12866 999 aa11.62□□□□□ -0.55
DDX41-204ENST00000504807 RNPS1Q15287 305 aaKnown RBP11.62□□□□□ -0.55
DDX41-204ENST00000504807 BEX5Q5H9J7 111 aa11.62□□□□□ -0.55
DDX41-204ENST00000504807 SFRP5Q5T4F7 317 aa11.62□□□□□ -0.55
DDX41-204ENST00000504807 ABLIM2Q6H8Q1 611 aa11.62□□□□□ -0.55
DDX41-204ENST00000504807 C3orf33Q6P1S2 294 aa11.62□□□□□ -0.55
DDX41-204ENST00000504807 BHLHB9Q6PI77 547 aa11.62□□□□□ -0.55
DDX41-204ENST00000504807 DNAJC14Q6Y2X3 702 aaPredicted RBP11.62□□□□□ -0.55
DDX41-204ENST00000504807 ADGRG3Q86Y34 549 aa11.62□□□□□ -0.55
DDX41-204ENST00000504807 ST8SIA1Q92185 356 aa11.62□□□□□ -0.55
DDX41-204ENST00000504807 TLCD1Q96CP7 247 aa11.62□□□□□ -0.55
DDX41-204ENST00000504807 MAELQ96JY0 434 aaKnown RBP11.62□□□□□ -0.55
DDX41-204ENST00000504807 OR52B2Q96RD2 323 aa11.62□□□□□ -0.55
DDX41-204ENST00000504807 HHATLQ9HCP6 504 aa11.62□□□□□ -0.55
DDX41-204ENST00000504807 YAE1D1Q9NRH1 226 aa11.62□□□□□ -0.55
DDX41-204ENST00000504807 NPAP1Q9NZP6 1156 aa11.62□□□□□ -0.55
DDX41-204ENST00000504807 STOML1Q9UBI4 398 aa11.62□□□□□ -0.55
DDX41-204ENST00000504807 GPR52Q9Y2T5 361 aa11.62□□□□□ -0.55
DDX41-204ENST00000504807 CHST2Q9Y4C5 530 aa11.62□□□□□ -0.55
DDX41-204ENST00000504807 ZC3H12DA2A288 527 aaKnown RBP11.61□□□□□ -0.55
DDX41-204ENST00000504807 DPRXA6NFQ7 191 aa11.61□□□□□ -0.55
DDX41-204ENST00000504807 CCDC154A6NI56 674 aa11.61□□□□□ -0.55
DDX41-204ENST00000504807 DUXAA6NLW8 204 aa11.61□□□□□ -0.55
DDX41-204ENST00000504807 SPRY1O43609 319 aaPredicted RBP11.61□□□□□ -0.55
DDX41-204ENST00000504807 LYZL6O75951 148 aa11.61□□□□□ -0.55
DDX41-204ENST00000504807 IGHV3-9P01782 118 aa11.61□□□□□ -0.55
DDX41-204ENST00000504807 PGRP06401 933 aa11.61□□□□□ -0.55
DDX41-204ENST00000504807 GUSBP08236 651 aa11.61□□□□□ -0.55
DDX41-204ENST00000504807 SOD3P08294 240 aa11.61□□□□□ -0.55
DDX41-204ENST00000504807 PPP3CBP16298 524 aa11.61□□□□□ -0.55
DDX41-204ENST00000504807 CCNA2P20248 432 aa11.61□□□□□ -0.55
DDX41-204ENST00000504807 RPS4Y1P22090 263 aaKnown RBP11.61□□□□□ -0.55
DDX41-204ENST00000504807 IGHV1-2P23083 117 aa11.61□□□□□ -0.55
DDX41-204ENST00000504807 SLC7A1P30825 629 aa11.61□□□□□ -0.55
DDX41-204ENST00000504807 OR3A2P47893 321 aa11.61□□□□□ -0.55
DDX41-204ENST00000504807 KHKP50053 298 aa11.61□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms