RNA–Protein interactions for RNA: ENST00000504000.1

SNF8-203, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 2

Gene SNF8, Length 1,899 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-203ENST00000504000 GPSM3Q9Y4H4 160 aa13.84□□□□□ -0.19
SNF8-203ENST00000504000 TRABD2BA6NFA1 517 aa13.84□□□□□ -0.19
SNF8-203ENST00000504000 NAP1L6A6NFF2 107 aa13.84□□□□□ -0.19
SNF8-203ENST00000504000 TNFSF14O43557 240 aa13.84□□□□□ -0.19
SNF8-203ENST00000504000 B3GALT2O43825 422 aa13.84□□□□□ -0.19
SNF8-203ENST00000504000 IFNA7P01567 189 aa13.84□□□□□ -0.19
SNF8-203ENST00000504000 ATF1P18846 271 aa13.84□□□□□ -0.19
SNF8-203ENST00000504000 PYCR1P32322 319 aa13.84□□□□□ -0.19
SNF8-203ENST00000504000 SNTB2Q13425 540 aaKnown RBP13.84□□□□□ -0.19
SNF8-203ENST00000504000 CDK5R1Q15078 307 aa13.84□□□□□ -0.19
SNF8-203ENST00000504000 GPR139Q6DWJ6 353 aa13.84□□□□□ -0.19
SNF8-203ENST00000504000 RPL22L1Q6P5R6 122 aaKnown RBP13.84□□□□□ -0.19
SNF8-203ENST00000504000 UNQ9370/PRO34162Q6UXP9 181 aa13.84□□□□□ -0.19
SNF8-203ENST00000504000 OR11H4Q8NGC9 324 aa13.84□□□□□ -0.19
SNF8-203ENST00000504000 OR13C2Q8NGS9 318 aa13.84□□□□□ -0.19
SNF8-203ENST00000504000 THAP4Q8WY91 577 aa13.84□□□□□ -0.19
SNF8-203ENST00000504000 MRI1Q9BV20 369 aa13.84□□□□□ -0.19
SNF8-203ENST00000504000 KLHL1Q9NR64 748 aa13.84□□□□□ -0.19
SNF8-203ENST00000504000 GLTPQ9NZD2 209 aa13.84□□□□□ -0.19
SNF8-203ENST00000504000 ICAM5Q9UMF0 924 aa13.84□□□□□ -0.19
SNF8-203ENST00000504000 A0A0B4J2E0 115 aa13.83□□□□□ -0.2
SNF8-203ENST00000504000 A0A1B0GX12 115 aa13.83□□□□□ -0.2
SNF8-203ENST00000504000 TUBAL3A6NHL2 446 aa13.83□□□□□ -0.2
SNF8-203ENST00000504000 GPRIN2O60269 458 aa13.83□□□□□ -0.2
SNF8-203ENST00000504000 BRINP1O60477 761 aa13.83□□□□□ -0.2
SNF8-203ENST00000504000 ECDO95905 644 aaPredicted RBP13.83□□□□□ -0.2
SNF8-203ENST00000504000 TGM6O95932 706 aa13.83□□□□□ -0.2
SNF8-203ENST00000504000 CD3GP09693 182 aa13.83□□□□□ -0.2
SNF8-203ENST00000504000 GKN3PP0CG01 181 aa13.83□□□□□ -0.2
SNF8-203ENST00000504000 FUT1P19526 365 aa13.83□□□□□ -0.2
SNF8-203ENST00000504000 CXCL3P19876 107 aa13.83□□□□□ -0.2
SNF8-203ENST00000504000 NOS3P29474 1203 aa13.83□□□□□ -0.2
SNF8-203ENST00000504000 ACVR1BP36896 505 aa13.83□□□□□ -0.2
SNF8-203ENST00000504000 GBX2P52951 348 aaPredicted RBP13.83□□□□□ -0.2
SNF8-203ENST00000504000 CLDN2P57739 230 aa13.83□□□□□ -0.2
SNF8-203ENST00000504000 DGCR2P98153 550 aa13.83□□□□□ -0.2
SNF8-203ENST00000504000 SGCGQ13326 291 aa13.83□□□□□ -0.2
SNF8-203ENST00000504000 ZSWIM7Q19AV6 140 aa13.83□□□□□ -0.2
SNF8-203ENST00000504000 CDONQ4KMG0 1287 aa13.83□□□□□ -0.2
SNF8-203ENST00000504000 TRMT12Q53H54 448 aaKnown RBP13.83□□□□□ -0.2
SNF8-203ENST00000504000 UBE2NLQ5JXB2 153 aa13.83□□□□□ -0.2
SNF8-203ENST00000504000 FBXO42Q6P3S6 717 aa13.83□□□□□ -0.2
SNF8-203ENST00000504000 OR5J2Q8NH18 312 aa13.83□□□□□ -0.2
SNF8-203ENST00000504000 LCN9Q8WX39 176 aa13.83□□□□□ -0.2
SNF8-203ENST00000504000 HOXB13Q92826 284 aaPredicted RBP13.83□□□□□ -0.2
SNF8-203ENST00000504000 FAM131CQ96AQ9 280 aa13.83□□□□□ -0.2
SNF8-203ENST00000504000 MRPL48Q96GC5 212 aaKnown RBP13.83□□□□□ -0.2
SNF8-203ENST00000504000 OR2A5Q96R48 311 aa13.83□□□□□ -0.2
SNF8-203ENST00000504000 TRPV4Q9HBA0 871 aa13.83□□□□□ -0.2
SNF8-203ENST00000504000 KCNN3Q9UGI6 736 aa13.83□□□□□ -0.2
SNF8-203ENST00000504000 TMA7Q9Y2S6 64 aaKnown RBP13.83□□□□□ -0.2
SNF8-203ENST00000504000 PLEKHM1Q9Y4G2 1056 aa13.83□□□□□ -0.2
SNF8-203ENST00000504000 BTN3A3O00478 584 aa13.82□□□□□ -0.2
SNF8-203ENST00000504000 PEX14O75381 377 aa13.82□□□□□ -0.2
SNF8-203ENST00000504000 TPPPO94811 219 aa13.82□□□□□ -0.2
SNF8-203ENST00000504000 HOXC4P09017 264 aaPredicted RBP13.82□□□□□ -0.2
SNF8-203ENST00000504000 POU3F3P20264 500 aaPredicted RBP13.82□□□□□ -0.2
SNF8-203ENST00000504000 GDI2P50395 445 aaKnown RBP13.82□□□□□ -0.2
SNF8-203ENST00000504000 SLC16A1P53985 500 aa13.82□□□□□ -0.2
SNF8-203ENST00000504000 SIRPAP78324 504 aa13.82□□□□□ -0.2
SNF8-203ENST00000504000 ILF3Q12906 894 aaKnown RBP eCLIP13.82□□□□□ -0.2
SNF8-203ENST00000504000 RUNX2Q13950 521 aa13.82□□□□□ -0.2
SNF8-203ENST00000504000 CAMK1Q14012 370 aa13.82□□□□□ -0.2
SNF8-203ENST00000504000 KIR2DS3Q14952 304 aa13.82□□□□□ -0.2
SNF8-203ENST00000504000 GRK1Q15835 563 aa13.82□□□□□ -0.2
SNF8-203ENST00000504000 ST3GAL2Q16842 350 aa13.82□□□□□ -0.2
SNF8-203ENST00000504000 LGALSLQ3ZCW2 172 aaPredicted RBP13.82□□□□□ -0.2
SNF8-203ENST00000504000 TOR2AQ5JU69 321 aa13.82□□□□□ -0.2
SNF8-203ENST00000504000 ELFN2Q5R3F8 820 aa13.82□□□□□ -0.2
SNF8-203ENST00000504000 TIGD4Q8IY51 512 aa13.82□□□□□ -0.2
SNF8-203ENST00000504000 LSMEM1Q8N8F7 131 aa13.82□□□□□ -0.2
SNF8-203ENST00000504000 COX18Q8N8Q8 333 aa13.82□□□□□ -0.2
SNF8-203ENST00000504000 RPS4Y2Q8TD47 263 aa13.82□□□□□ -0.2
SNF8-203ENST00000504000 LCORQ96JN0 433 aaPredicted RBP13.82□□□□□ -0.2
SNF8-203ENST00000504000 MYADMQ96S97 322 aa13.82□□□□□ -0.2
SNF8-203ENST00000504000 C1QTNF7Q9BXJ2 289 aa13.82□□□□□ -0.2
SNF8-203ENST00000504000 CLEC4MQ9H2X3 399 aaPredicted RBP13.82□□□□□ -0.2
SNF8-203ENST00000504000 NRIP3Q9NQ35 241 aa13.82□□□□□ -0.2
SNF8-203ENST00000504000 NANSQ9NR45 359 aa13.82□□□□□ -0.2
SNF8-203ENST00000504000 DLL4Q9NR61 685 aa13.82□□□□□ -0.2
SNF8-203ENST00000504000 RWDD3Q9Y3V2 267 aa13.82□□□□□ -0.2
SNF8-203ENST00000504000 PCDHGA9Q9Y5G4 932 aaKnown RBP13.82□□□□□ -0.2
SNF8-203ENST00000504000 OR5K3A6NET4 321 aa13.82□□□□□ -0.2
SNF8-203ENST00000504000 ZSCAN5BA6NJL1 495 aa13.82□□□□□ -0.2
SNF8-203ENST00000504000 ZNF879B4DU55 563 aa13.82□□□□□ -0.2
SNF8-203ENST00000504000 SULT1B1O43704 296 aa13.82□□□□□ -0.2
SNF8-203ENST00000504000 KAT7O95251 611 aa13.82□□□□□ -0.2
SNF8-203ENST00000504000 PDGFAP04085 211 aa13.82□□□□□ -0.2
SNF8-203ENST00000504000 MRPL3P09001 348 aaKnown RBP13.82□□□□□ -0.2
SNF8-203ENST00000504000 RPS11P62280 158 aaKnown RBP eCLIP13.82□□□□□ -0.2
SNF8-203ENST00000504000 SNTA1Q13424 505 aa13.82□□□□□ -0.2
SNF8-203ENST00000504000 FHL1Q13642 323 aa13.82□□□□□ -0.2
SNF8-203ENST00000504000 RPTNQ6XPR3 784 aa13.82□□□□□ -0.2
SNF8-203ENST00000504000 ZNF527Q8NB42 609 aa13.82□□□□□ -0.2
SNF8-203ENST00000504000 FAM71CQ8NEG0 241 aa13.82□□□□□ -0.2
SNF8-203ENST00000504000 GIMAP1Q8WWP7 306 aa13.82□□□□□ -0.2
SNF8-203ENST00000504000 RSC1A1Q92681 617 aa13.82□□□□□ -0.2
SNF8-203ENST00000504000 NXPE2Q96DL1 559 aa13.82□□□□□ -0.2
SNF8-203ENST00000504000 PELI1Q96FA3 418 aa13.82□□□□□ -0.2
SNF8-203ENST00000504000 APOOQ9BUR5 198 aa13.82□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms