RNA–Protein interactions for RNA: ENST00000502773.5

PDGFC-203, Transcript of platelet derived growth factor C, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDGFC, Length 4,165 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFC-203ENST00000502773 RUNX2Q13950 521 aa6.87□□□□□ -1.31
PDGFC-203ENST00000502773 ANGPT1Q15389 498 aa6.87□□□□□ -1.31
PDGFC-203ENST00000502773 TMEM236Q5W0B7 351 aa6.87□□□□□ -1.31
PDGFC-203ENST00000502773 FCRL6Q6DN72 434 aa6.87□□□□□ -1.31
PDGFC-203ENST00000502773 DPY19L2P2Q6ZN68 376 aa6.87□□□□□ -1.31
PDGFC-203ENST00000502773 C10orf53Q8N6V4 93 aa6.87□□□□□ -1.31
PDGFC-203ENST00000502773 SLC37A2Q8TED4 501 aa6.87□□□□□ -1.31
PDGFC-203ENST00000502773 DEDD2Q8WXF8 326 aa6.87□□□□□ -1.31
PDGFC-203ENST00000502773 C10orf90Q96M02 699 aa6.87□□□□□ -1.31
PDGFC-203ENST00000502773 SECISBP2Q96T21 854 aaKnown RBP6.87□□□□□ -1.31
PDGFC-203ENST00000502773 ZNF416Q9BWM5 594 aa6.87□□□□□ -1.31
PDGFC-203ENST00000502773 SLA2Q9H6Q3 261 aa6.87□□□□□ -1.31
PDGFC-203ENST00000502773 NARFLQ9H6Q4 476 aa6.87□□□□□ -1.31
PDGFC-203ENST00000502773 TIGARQ9NQ88 270 aa6.87□□□□□ -1.31
PDGFC-203ENST00000502773 IFT46Q9NQC8 304 aa6.87□□□□□ -1.31
PDGFC-203ENST00000502773 CMC2Q9NRP2 79 aa6.87□□□□□ -1.31
PDGFC-203ENST00000502773 SNTG1Q9NSN8 517 aa6.87□□□□□ -1.31
PDGFC-203ENST00000502773 CLEC1BQ9P126 229 aa6.87□□□□□ -1.31
PDGFC-203ENST00000502773 PLEKHM1Q9Y4G2 1056 aa6.87□□□□□ -1.31
PDGFC-203ENST00000502773 SNX11Q9Y5W9 270 aa6.87□□□□□ -1.31
PDGFC-203ENST00000502773 MYOFQ9NZM1 2061 aa6.87□□□□□ -1.31
PDGFC-203ENST00000502773 TEX51A0A1B0GUA7 166 aa6.87□□□□□ -1.31
PDGFC-203ENST00000502773 METTL12A8MUP2 240 aa6.87□□□□□ -1.31
PDGFC-203ENST00000502773 FFAR1O14842 300 aa6.87□□□□□ -1.31
PDGFC-203ENST00000502773 TOX3O15405 576 aaPredicted RBP6.87□□□□□ -1.31
PDGFC-203ENST00000502773 TPST2O60704 377 aa6.87□□□□□ -1.31
PDGFC-203ENST00000502773 CSO75390 466 aaKnown RBP6.87□□□□□ -1.31
PDGFC-203ENST00000502773 REM1O75628 298 aa6.87□□□□□ -1.31
PDGFC-203ENST00000502773 HEXBP07686 556 aa6.87□□□□□ -1.31
PDGFC-203ENST00000502773 OR2T7P0C7T2 308 aa6.87□□□□□ -1.31
PDGFC-203ENST00000502773 NR2C1P13056 603 aa6.87□□□□□ -1.31
PDGFC-203ENST00000502773 APEHP13798 732 aaKnown RBP6.87□□□□□ -1.31
PDGFC-203ENST00000502773 NME1P15531 152 aaKnown RBP6.87□□□□□ -1.31
PDGFC-203ENST00000502773 DRD5P21918 477 aa6.87□□□□□ -1.31
PDGFC-203ENST00000502773 PBX2P40425 430 aa6.87□□□□□ -1.31
PDGFC-203ENST00000502773 SLC1A3P43003 542 aa6.87□□□□□ -1.31
PDGFC-203ENST00000502773 CAPZBP47756 277 aa6.87□□□□□ -1.31
PDGFC-203ENST00000502773 OMPP47874 163 aa6.87□□□□□ -1.31
PDGFC-203ENST00000502773 PDX1P52945 283 aa6.87□□□□□ -1.31
PDGFC-203ENST00000502773 CRYBA2P53672 197 aa6.87□□□□□ -1.31
PDGFC-203ENST00000502773 MAZP56270 477 aaKnown RBP6.87□□□□□ -1.31
PDGFC-203ENST00000502773 ACY1Q03154 408 aa6.87□□□□□ -1.31
PDGFC-203ENST00000502773 ZNF141Q15928 474 aa6.87□□□□□ -1.31
PDGFC-203ENST00000502773 PYDC2Q56P42 97 aa6.87□□□□□ -1.31
PDGFC-203ENST00000502773 ALG10BQ5I7T1 473 aa6.87□□□□□ -1.31
PDGFC-203ENST00000502773 MRPL2Q5T653 305 aaKnown RBP6.87□□□□□ -1.31
PDGFC-203ENST00000502773 FAM180BQ6P0A1 224 aa6.87□□□□□ -1.31
PDGFC-203ENST00000502773 C19orf48Q6RUI8 117 aa6.87□□□□□ -1.31
PDGFC-203ENST00000502773 SLC16A11Q8NCK7 471 aa6.87□□□□□ -1.31
PDGFC-203ENST00000502773 OR2T27Q8NH04 317 aa6.87□□□□□ -1.31
PDGFC-203ENST00000502773 C7orf50Q9BRJ6 194 aaKnown RBP6.87□□□□□ -1.31
PDGFC-203ENST00000502773 ARHGAP9Q9BRR9 750 aa6.87□□□□□ -1.31
PDGFC-203ENST00000502773 FUZQ9BT04 418 aa6.87□□□□□ -1.31
PDGFC-203ENST00000502773 LMAN1LQ9HAT1 526 aa6.87□□□□□ -1.31
PDGFC-203ENST00000502773 FOLH1BQ9HBA9 442 aa6.87□□□□□ -1.31
PDGFC-203ENST00000502773 NIT2Q9NQR4 276 aa6.87□□□□□ -1.31
PDGFC-203ENST00000502773 EXOSC3Q9NQT5 275 aaKnown RBP6.87□□□□□ -1.31
PDGFC-203ENST00000502773 CBLCQ9ULV8 474 aa6.87□□□□□ -1.31
PDGFC-203ENST00000502773 SURF4O15260 269 aa6.86□□□□□ -1.31
PDGFC-203ENST00000502773 LINC01565O15544 149 aa6.86□□□□□ -1.31
PDGFC-203ENST00000502773 EIF4E2O60573 245 aaKnown RBP6.86□□□□□ -1.31
PDGFC-203ENST00000502773 CSF2P04141 144 aa6.86□□□□□ -1.31
PDGFC-203ENST00000502773 CD1AP06126 327 aa6.86□□□□□ -1.31
PDGFC-203ENST00000502773 PGCP20142 388 aa6.86□□□□□ -1.31
PDGFC-203ENST00000502773 RPS4Y1P22090 263 aaKnown RBP6.86□□□□□ -1.31
PDGFC-203ENST00000502773 NUP62P37198 522 aaPredicted RBP6.86□□□□□ -1.31
PDGFC-203ENST00000502773 MAP2K6P52564 334 aa6.86□□□□□ -1.31
PDGFC-203ENST00000502773 RPL6Q02878 288 aaKnown RBP6.86□□□□□ -1.31
PDGFC-203ENST00000502773 DUSP5Q16690 384 aa6.86□□□□□ -1.31
PDGFC-203ENST00000502773 CPEB4Q17RY0 729 aaKnown RBP eCLIP6.86□□□□□ -1.31
PDGFC-203ENST00000502773 DNM1P34Q6PK57 102 aa6.86□□□□□ -1.31
PDGFC-203ENST00000502773 SYS1Q8N2H4 156 aa6.86□□□□□ -1.31
PDGFC-203ENST00000502773 OR52R1Q8NGF1 315 aa6.86□□□□□ -1.31
PDGFC-203ENST00000502773 SNX33Q8WV41 574 aa6.86□□□□□ -1.31
PDGFC-203ENST00000502773 SLC25A46Q96AG3 418 aa6.86□□□□□ -1.31
PDGFC-203ENST00000502773 MSLNLQ96KJ4 702 aa6.86□□□□□ -1.31
PDGFC-203ENST00000502773 CSF3RQ99062 836 aa6.86□□□□□ -1.31
PDGFC-203ENST00000502773 OR51E2Q9H255 320 aa6.86□□□□□ -1.31
PDGFC-203ENST00000502773 C19orf25Q9UFG5 118 aaPredicted RBP6.86□□□□□ -1.31
PDGFC-203ENST00000502773 FAM240BA0A1B0GVZ2 78 aa6.86□□□□□ -1.31
PDGFC-203ENST00000502773 SLC35F4A4IF30 521 aa6.86□□□□□ -1.31
PDGFC-203ENST00000502773 BMP4P12644 408 aa6.86□□□□□ -1.31
PDGFC-203ENST00000502773 CTRB1P17538 263 aa6.86□□□□□ -1.31
PDGFC-203ENST00000502773 COL9A1P20849 921 aa6.86□□□□□ -1.31
PDGFC-203ENST00000502773 FKBP2P26885 142 aaKnown RBP6.86□□□□□ -1.31
PDGFC-203ENST00000502773 PEBP1P30086 187 aaKnown RBP6.86□□□□□ -1.31
PDGFC-203ENST00000502773 ADH7P40394 386 aa6.86□□□□□ -1.31
PDGFC-203ENST00000502773 EEF1A1P68104 462 aaKnown RBP6.86□□□□□ -1.31
PDGFC-203ENST00000502773 BCL2A1Q16548 175 aa6.86□□□□□ -1.31
PDGFC-203ENST00000502773 PRICKLE4Q2TBC4 344 aa6.86□□□□□ -1.31
PDGFC-203ENST00000502773 ESCO2Q56NI9 601 aa6.86□□□□□ -1.31
PDGFC-203ENST00000502773 CTRB2Q6GPI1 263 aa6.86□□□□□ -1.31
PDGFC-203ENST00000502773 MMP21Q8N119 569 aa6.86□□□□□ -1.31
PDGFC-203ENST00000502773 SEMA4GQ9NTN9 838 aa6.86□□□□□ -1.31
PDGFC-203ENST00000502773 HPF1Q9NWY4 346 aa6.86□□□□□ -1.31
PDGFC-203ENST00000502773 GLTPQ9NZD2 209 aa6.86□□□□□ -1.31
PDGFC-203ENST00000502773 NPFFR2Q9Y5X5 522 aa6.86□□□□□ -1.31
PDGFC-203ENST00000502773 ANKRD61A6NGH8 418 aa6.86□□□□□ -1.31
PDGFC-203ENST00000502773 KHDRBS3O75525 346 aaKnown RBP6.86□□□□□ -1.31
PDGFC-203ENST00000502773 TBX6O95947 436 aaPredicted RBP6.86□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms