RNA–Protein interactions for RNA: ENST00000502717.5

HMGXB3-201, Transcript of HMG-box containing 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene HMGXB3, Length 4,974 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB3-201ENST00000502717 PDE7AQ13946 482 aa16.09■□□□□ 0.17
HMGXB3-201ENST00000502717 ARHGAP19Q14CB8 494 aa16.09■□□□□ 0.17
HMGXB3-201ENST00000502717 HSD11B1LQ7Z5J1 315 aa16.09■□□□□ 0.17
HMGXB3-201ENST00000502717 PHYHIPQ92561 330 aa16.09■□□□□ 0.17
HMGXB3-201ENST00000502717 TANKQ92844 425 aa16.09■□□□□ 0.17
HMGXB3-201ENST00000502717 SMG9Q9H0W8 520 aaKnown RBP16.09■□□□□ 0.17
HMGXB3-201ENST00000502717 ANKRD19PQ9H560 264 aa16.09■□□□□ 0.17
HMGXB3-201ENST00000502717 HSPA12AO43301 675 aa16.09■□□□□ 0.17
HMGXB3-201ENST00000502717 CLEC3AO75596 197 aa16.09■□□□□ 0.17
HMGXB3-201ENST00000502717 TSPAN12O95859 305 aa16.09■□□□□ 0.17
HMGXB3-201ENST00000502717 ITGA5P08648 1049 aa16.09■□□□□ 0.17
HMGXB3-201ENST00000502717 PRPS1P60891 318 aa16.09■□□□□ 0.17
HMGXB3-201ENST00000502717 YIF1BQ5BJH7 314 aa16.09■□□□□ 0.17
HMGXB3-201ENST00000502717 ERN2Q76MJ5 926 aaKnown RBP16.09■□□□□ 0.17
HMGXB3-201ENST00000502717 RABEPKQ7Z6M1 372 aa16.09■□□□□ 0.17
HMGXB3-201ENST00000502717 SLC35F3Q8IY50 421 aa16.09■□□□□ 0.17
HMGXB3-201ENST00000502717 ZNF440Q8IYI8 595 aa16.09■□□□□ 0.17
HMGXB3-201ENST00000502717 ZNF619Q8N2I2 560 aa16.09■□□□□ 0.17
HMGXB3-201ENST00000502717 UCN3Q969E3 161 aa16.09■□□□□ 0.17
HMGXB3-201ENST00000502717 LRRC46Q96FV0 321 aa16.09■□□□□ 0.17
HMGXB3-201ENST00000502717 LDHAL6BQ9BYZ2 381 aaPredicted RBP16.09■□□□□ 0.17
HMGXB3-201ENST00000502717 ZNF281Q9Y2X9 895 aa16.09■□□□□ 0.17
HMGXB3-201ENST00000502717 NUP205Q92621 2012 aa16.09■□□□□ 0.17
HMGXB3-201ENST00000502717 MAP1BP46821 2468 aaKnown RBP16.09■□□□□ 0.17
HMGXB3-201ENST00000502717 SCO2O43819 266 aa16.08■□□□□ 0.17
HMGXB3-201ENST00000502717 GP1BBP13224 206 aa16.08■□□□□ 0.17
HMGXB3-201ENST00000502717 FPR3P25089 353 aa16.08■□□□□ 0.17
HMGXB3-201ENST00000502717 PRLHRP49683 370 aa16.08■□□□□ 0.17
HMGXB3-201ENST00000502717 ZNF800Q2TB10 664 aaPredicted RBP eCLIP16.08■□□□□ 0.17
HMGXB3-201ENST00000502717 AVPI1Q5T686 147 aa16.08■□□□□ 0.17
HMGXB3-201ENST00000502717 FAM71E1Q6IPT2 247 aa16.08■□□□□ 0.17
HMGXB3-201ENST00000502717 ZNF529Q6P280 563 aa16.08■□□□□ 0.17
HMGXB3-201ENST00000502717 SDR9C7Q8NEX9 313 aa16.08■□□□□ 0.17
HMGXB3-201ENST00000502717 OR5AR1Q8NGP9 310 aa16.08■□□□□ 0.17
HMGXB3-201ENST00000502717 OR9A2Q8NGT5 310 aa16.08■□□□□ 0.17
HMGXB3-201ENST00000502717 PHOSPHO2Q8TCD6 241 aa16.08■□□□□ 0.17
HMGXB3-201ENST00000502717 DUSP19Q8WTR2 217 aa16.08■□□□□ 0.17
HMGXB3-201ENST00000502717 PDXPQ96GD0 296 aa16.08■□□□□ 0.17
HMGXB3-201ENST00000502717 OR7D2Q96RA2 312 aa16.08■□□□□ 0.17
HMGXB3-201ENST00000502717 WASH3PC4AMC7 463 aa16.08■□□□□ 0.16
HMGXB3-201ENST00000502717 ZNF35P13682 527 aa16.08■□□□□ 0.16
HMGXB3-201ENST00000502717 RPS15AP62244 130 aaKnown RBP16.08■□□□□ 0.16
HMGXB3-201ENST00000502717 IFITM3Q01628 133 aa16.08■□□□□ 0.16
HMGXB3-201ENST00000502717 LTBQ06643 244 aa16.08■□□□□ 0.16
HMGXB3-201ENST00000502717 NKPD1Q17RQ9 610 aa16.08■□□□□ 0.16
HMGXB3-201ENST00000502717 MBOAT2Q6ZWT7 520 aa16.08■□□□□ 0.16
HMGXB3-201ENST00000502717 GAREM2Q75VX8 874 aa16.08■□□□□ 0.16
HMGXB3-201ENST00000502717 RASGRP3Q8IV61 690 aa16.08■□□□□ 0.16
HMGXB3-201ENST00000502717 URM1Q9BTM9 101 aaKnown RBP16.08■□□□□ 0.16
HMGXB3-201ENST00000502717 SLC23A1Q9UHI7 598 aa16.08■□□□□ 0.16
HMGXB3-201ENST00000502717 ADAM29Q9UKF5 820 aa16.08■□□□□ 0.16
HMGXB3-201ENST00000502717 MAFFQ9ULX9 164 aa16.08■□□□□ 0.16
HMGXB3-201ENST00000502717 THSD7AQ9UPZ6 1657 aa16.08■□□□□ 0.16
HMGXB3-201ENST00000502717 I6L893 689 aaPredicted RBP16.08■□□□□ 0.16
HMGXB3-201ENST00000502717 OC90Q02509 493 aaPredicted RBP16.08■□□□□ 0.16
HMGXB3-201ENST00000502717 LSMEM1Q8N8F7 131 aa16.08■□□□□ 0.16
HMGXB3-201ENST00000502717 RAB7BQ96AH8 199 aa16.08■□□□□ 0.16
HMGXB3-201ENST00000502717 RTP3Q9BQQ7 232 aa16.08■□□□□ 0.16
HMGXB3-201ENST00000502717 APMAPQ9HDC9 416 aa16.08■□□□□ 0.16
HMGXB3-201ENST00000502717 GYPBP06028 91 aa16.08■□□□□ 0.16
HMGXB3-201ENST00000502717 CAMLGP49069 296 aa16.08■□□□□ 0.16
HMGXB3-201ENST00000502717 SIRPAP78324 504 aa16.08■□□□□ 0.16
HMGXB3-201ENST00000502717 RPL19P84098 196 aaKnown RBP16.08■□□□□ 0.16
HMGXB3-201ENST00000502717 FABP5Q01469 135 aa16.08■□□□□ 0.16
HMGXB3-201ENST00000502717 CHRFAM7AQ494W8 412 aa16.08■□□□□ 0.16
HMGXB3-201ENST00000502717 CDRT4Q8N9R6 151 aa16.08■□□□□ 0.16
HMGXB3-201ENST00000502717 DNAAF1Q8NEP3 725 aa16.08■□□□□ 0.16
HMGXB3-201ENST00000502717 KLHDC9Q8NEP7 349 aa16.08■□□□□ 0.16
HMGXB3-201ENST00000502717 OR2L8Q8NGY9 312 aa16.08■□□□□ 0.16
HMGXB3-201ENST00000502717 FOXJ1Q92949 421 aa16.08■□□□□ 0.16
HMGXB3-201ENST00000502717 FOXRED1Q96CU9 486 aaPredicted RBP16.08■□□□□ 0.16
HMGXB3-201ENST00000502717 KLHL15Q96M94 604 aa16.08■□□□□ 0.16
HMGXB3-201ENST00000502717 PRMT8Q9NR22 394 aaPredicted RBP16.08■□□□□ 0.16
HMGXB3-201ENST00000502717 ZNF225Q9UK10 706 aa16.08■□□□□ 0.16
HMGXB3-201ENST00000502717 SEC61A1P61619 476 aaKnown RBP16.07■□□□□ 0.16
HMGXB3-201ENST00000502717 GALK2Q01415 458 aa16.07■□□□□ 0.16
HMGXB3-201ENST00000502717 PRSS42Q7Z5A4 293 aa16.07■□□□□ 0.16
HMGXB3-201ENST00000502717 MSRB3Q8IXL7 192 aa16.07■□□□□ 0.16
HMGXB3-201ENST00000502717 SEC22CQ9BRL7 303 aa16.07■□□□□ 0.16
HMGXB3-201ENST00000502717 LGI1O95970 557 aa16.07■□□□□ 0.16
HMGXB3-201ENST00000502717 IL13RA1P78552 427 aa16.07■□□□□ 0.16
HMGXB3-201ENST00000502717 ZNF585AQ6P3V2 769 aa16.07■□□□□ 0.16
HMGXB3-201ENST00000502717 FAM122BQ7Z309 247 aa16.07■□□□□ 0.16
HMGXB3-201ENST00000502717 ZNF860A6NHJ4 632 aa16.07■□□□□ 0.16
HMGXB3-201ENST00000502717 SOCS6O14544 535 aa16.07■□□□□ 0.16
HMGXB3-201ENST00000502717 CSTBP04080 98 aaKnown RBP16.07■□□□□ 0.16
HMGXB3-201ENST00000502717 ADRB1P08588 477 aa16.07■□□□□ 0.16
HMGXB3-201ENST00000502717 C6P13671 934 aa16.07■□□□□ 0.16
HMGXB3-201ENST00000502717 AMY2BP19961 511 aa16.07■□□□□ 0.16
HMGXB3-201ENST00000502717 TRIM23P36406 574 aa16.07■□□□□ 0.16
HMGXB3-201ENST00000502717 OR6T1Q8NGN1 323 aa16.07■□□□□ 0.16
HMGXB3-201ENST00000502717 OR13C3Q8NGS6 347 aa16.07■□□□□ 0.16
HMGXB3-201ENST00000502717 SIRT5Q9NXA8 310 aa16.07■□□□□ 0.16
HMGXB3-201ENST00000502717 USP36Q9P275 1121 aaKnown RBP16.07■□□□□ 0.16
HMGXB3-201ENST00000502717 ZNF443Q9Y2A4 671 aaPredicted RBP16.07■□□□□ 0.16
HMGXB3-201ENST00000502717 D6RAR5 112 aa16.07■□□□□ 0.16
HMGXB3-201ENST00000502717 RHOP08100 348 aa16.07■□□□□ 0.16
HMGXB3-201ENST00000502717 PRPH2P23942 346 aa16.07■□□□□ 0.16
HMGXB3-201ENST00000502717 OPRD1P41143 372 aa16.07■□□□□ 0.16
HMGXB3-201ENST00000502717 PEA15Q15121 130 aa16.07■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms