RNA–Protein interactions for RNA: ENST00000498534.5

CNOT4-211, Transcript of CCR4-NOT transcription complex subunit 4, humanhuman

TSL 2

Gene CNOT4, Length 481 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4-211ENST00000498534 ALPK2Q86TB3 2170 aa10.63□□□□□ -0.71
CNOT4-211ENST00000498534 CIB4A0PJX0 185 aa10.63□□□□□ -0.71
CNOT4-211ENST00000498534 OR5H1A6NKK0 313 aa10.63□□□□□ -0.71
CNOT4-211ENST00000498534 CCT8L1PA6NM43 557 aa10.63□□□□□ -0.71
CNOT4-211ENST00000498534 RNF212BA8MTL3 300 aa10.63□□□□□ -0.71
CNOT4-211ENST00000498534 A8MV72 311 aaPredicted RBP10.63□□□□□ -0.71
CNOT4-211ENST00000498534 ESPNB1AK53 854 aa10.63□□□□□ -0.71
CNOT4-211ENST00000498534 SHISA9B4DS77 424 aa10.63□□□□□ -0.71
CNOT4-211ENST00000498534 ETV2O00321 342 aaPredicted RBP10.63□□□□□ -0.71
CNOT4-211ENST00000498534 GPR171O14626 319 aa10.63□□□□□ -0.71
CNOT4-211ENST00000498534 ABCD4O14678 606 aa10.63□□□□□ -0.71
CNOT4-211ENST00000498534 SMAD9O15198 467 aaKnown RBP10.63□□□□□ -0.71
CNOT4-211ENST00000498534 NDUFS7O75251 213 aa10.63□□□□□ -0.71
CNOT4-211ENST00000498534 PGM3O95394 542 aa10.63□□□□□ -0.71
CNOT4-211ENST00000498534 CD8AP01732 235 aa10.63□□□□□ -0.71
CNOT4-211ENST00000498534 IGHV1-2P23083 117 aa10.63□□□□□ -0.71
CNOT4-211ENST00000498534 FKBP2P26885 142 aaKnown RBP10.63□□□□□ -0.71
CNOT4-211ENST00000498534 SERPINB5P36952 375 aa10.63□□□□□ -0.71
CNOT4-211ENST00000498534 APOBEC1P41238 236 aaKnown RBP10.63□□□□□ -0.71
CNOT4-211ENST00000498534 CDH11P55287 796 aa10.63□□□□□ -0.71
CNOT4-211ENST00000498534 SESN3P58005 492 aa10.63□□□□□ -0.71
CNOT4-211ENST00000498534 DSCR9P59020 149 aa10.63□□□□□ -0.71
CNOT4-211ENST00000498534 HBA1P69905 142 aa10.63□□□□□ -0.71
CNOT4-211ENST00000498534 MAD2L1Q13257 205 aaPredicted RBP10.63□□□□□ -0.71
CNOT4-211ENST00000498534 ZNF141Q15928 474 aa10.63□□□□□ -0.71
CNOT4-211ENST00000498534 ARHGAP11BQ3KRB8 267 aa10.63□□□□□ -0.71
CNOT4-211ENST00000498534 XKR7Q5GH72 579 aa10.63□□□□□ -0.71
CNOT4-211ENST00000498534 ATAD3BQ5T9A4 648 aa10.63□□□□□ -0.71
CNOT4-211ENST00000498534 FBXW9Q5XUX1 488 aa10.63□□□□□ -0.71
CNOT4-211ENST00000498534 C16orf62Q7Z3J2 963 aa10.63□□□□□ -0.71
CNOT4-211ENST00000498534 MTDHQ86UE4 582 aaKnown RBP10.63□□□□□ -0.71
CNOT4-211ENST00000498534 DTX2Q86UW9 622 aa10.63□□□□□ -0.71
CNOT4-211ENST00000498534 RIMKLAQ8IXN7 391 aa10.63□□□□□ -0.71
CNOT4-211ENST00000498534 ZNF433Q8N7K0 673 aaPredicted RBP10.63□□□□□ -0.71
CNOT4-211ENST00000498534 OR5D16Q8NGK9 328 aa10.63□□□□□ -0.71
CNOT4-211ENST00000498534 SLC25A43Q8WUT9 341 aaPredicted RBP10.63□□□□□ -0.71
CNOT4-211ENST00000498534 ZNF75CPQ92670 426 aaPredicted RBP10.63□□□□□ -0.71
CNOT4-211ENST00000498534 TUBGCP3Q96CW5 907 aa10.63□□□□□ -0.71
CNOT4-211ENST00000498534 APOPT1Q96IL0 206 aa10.63□□□□□ -0.71
CNOT4-211ENST00000498534 ZNF300Q96RE9 604 aaPredicted RBP10.63□□□□□ -0.71
CNOT4-211ENST00000498534 QRSL1Q9H0R6 528 aaKnown RBP10.63□□□□□ -0.71
CNOT4-211ENST00000498534 ACER3Q9NUN7 267 aa10.63□□□□□ -0.71
CNOT4-211ENST00000498534 MKS1Q9NXB0 559 aa10.63□□□□□ -0.71
CNOT4-211ENST00000498534 GDF2Q9UK05 429 aaPredicted RBP10.63□□□□□ -0.71
CNOT4-211ENST00000498534 POU2F3Q9UKI9 436 aa10.63□□□□□ -0.71
CNOT4-211ENST00000498534 B3GALT5Q9Y2C3 310 aa10.63□□□□□ -0.71
CNOT4-211ENST00000498534 ANKRD28O15084 1053 aa10.62□□□□□ -0.71
CNOT4-211ENST00000498534 FCMRO60667 390 aa10.62□□□□□ -0.71
CNOT4-211ENST00000498534 DNAJA2O60884 412 aa10.62□□□□□ -0.71
CNOT4-211ENST00000498534 H6PDO95479 791 aa10.62□□□□□ -0.71
CNOT4-211ENST00000498534 AGR2O95994 175 aa10.62□□□□□ -0.71
CNOT4-211ENST00000498534 THBS1P07996 1170 aa10.62□□□□□ -0.71
CNOT4-211ENST00000498534 UBTFL6P0CB48 400 aaPredicted RBP10.62□□□□□ -0.71
CNOT4-211ENST00000498534 BMP4P12644 408 aa10.62□□□□□ -0.71
CNOT4-211ENST00000498534 COX5AP20674 150 aa10.62□□□□□ -0.71
CNOT4-211ENST00000498534 PTAFRP25105 342 aa10.62□□□□□ -0.71
CNOT4-211ENST00000498534 NUDT6P53370 316 aa10.62□□□□□ -0.71
CNOT4-211ENST00000498534 CLDN8P56748 225 aa10.62□□□□□ -0.71
CNOT4-211ENST00000498534 RPS26P62854 115 aaKnown RBP10.62□□□□□ -0.71
CNOT4-211ENST00000498534 CHRNEQ04844 493 aa10.62□□□□□ -0.71
CNOT4-211ENST00000498534 SKP2Q13309 424 aa10.62□□□□□ -0.71
CNOT4-211ENST00000498534 PDK3Q15120 406 aa10.62□□□□□ -0.71
CNOT4-211ENST00000498534 RAB35Q15286 201 aa10.62□□□□□ -0.71
CNOT4-211ENST00000498534 CHRFAM7AQ494W8 412 aa10.62□□□□□ -0.71
CNOT4-211ENST00000498534 SYT14P1Q58G82 188 aa10.62□□□□□ -0.71
CNOT4-211ENST00000498534 SLC22A25Q6T423 547 aa10.62□□□□□ -0.71
CNOT4-211ENST00000498534 CLEC2AQ6UVW9 174 aa10.62□□□□□ -0.71
CNOT4-211ENST00000498534 SEZ6L2Q6UXD5 910 aa10.62□□□□□ -0.71
CNOT4-211ENST00000498534 DNM1P46Q6ZS02 220 aa10.62□□□□□ -0.71
CNOT4-211ENST00000498534 ZC3HAV1Q7Z2W4 902 aaKnown RBP10.62□□□□□ -0.71
CNOT4-211ENST00000498534 FBXL14Q8N1E6 418 aa10.62□□□□□ -0.71
CNOT4-211ENST00000498534 ZNF563Q8TA94 476 aa10.62□□□□□ -0.71
CNOT4-211ENST00000498534 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP10.62□□□□□ -0.715e-8■■■■■ 65.3
CNOT4-211ENST00000498534 APH1AQ96BI3 265 aa10.62□□□□□ -0.71
CNOT4-211ENST00000498534 ZNF524Q96C55 264 aa10.62□□□□□ -0.71
CNOT4-211ENST00000498534 C3orf30Q96M34 536 aa10.62□□□□□ -0.71
CNOT4-211ENST00000498534 MECRQ9BV79 373 aa10.62□□□□□ -0.71
CNOT4-211ENST00000498534 ASB6Q9NWX5 421 aa10.62□□□□□ -0.71
CNOT4-211ENST00000498534 ZDHHC2Q9UIJ5 367 aa10.62□□□□□ -0.71
CNOT4-211ENST00000498534 MKLN1Q9UL63 735 aa10.62□□□□□ -0.71
CNOT4-211ENST00000498534 NOSIPQ9Y314 301 aaKnown RBP10.62□□□□□ -0.71
CNOT4-211ENST00000498534 IGKV3D-15A0A087WSY6 115 aa10.61□□□□□ -0.71
CNOT4-211ENST00000498534 FAM234BA2RU67 622 aa10.61□□□□□ -0.71
CNOT4-211ENST00000498534 MRPL33O75394 65 aaKnown RBP10.61□□□□□ -0.71
CNOT4-211ENST00000498534 SKAP2O75563 359 aaPredicted RBP10.61□□□□□ -0.71
CNOT4-211ENST00000498534 UGT2B17O75795 530 aa10.61□□□□□ -0.71
CNOT4-211ENST00000498534 IGHV3-9P01782 118 aa10.61□□□□□ -0.71
CNOT4-211ENST00000498534 DHRS4L1P0CG22 281 aa10.61□□□□□ -0.71
CNOT4-211ENST00000498534 G6PDP11413 515 aa10.61□□□□□ -0.71
CNOT4-211ENST00000498534 PTNP21246 168 aa10.61□□□□□ -0.71
CNOT4-211ENST00000498534 TTKP33981 857 aa10.61□□□□□ -0.71
CNOT4-211ENST00000498534 CLK1P49759 484 aaKnown RBP10.61□□□□□ -0.71
CNOT4-211ENST00000498534 ZNF83P51522 516 aa10.61□□□□□ -0.71
CNOT4-211ENST00000498534 EMX2Q04743 252 aa10.61□□□□□ -0.71
CNOT4-211ENST00000498534 OR7E24Q6IFN5 339 aa10.61□□□□□ -0.71
CNOT4-211ENST00000498534 ZCCHC23Q6ZST2 131 aa10.61□□□□□ -0.71
CNOT4-211ENST00000498534 RIBC1Q8N443 379 aaPredicted RBP10.61□□□□□ -0.71
CNOT4-211ENST00000498534 VPS37AQ8NEZ2 397 aa10.61□□□□□ -0.71
CNOT4-211ENST00000498534 OR52N5Q8NH56 324 aa10.61□□□□□ -0.71
CNOT4-211ENST00000498534 XAGE5Q8WWM1 108 aa10.61□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 61.4 ms