RNA–Protein interactions for RNA: ENST00000498466.1

CCDC58-207, Transcript of coiled-coil domain containing 58, humanhuman

TSL 2

Gene CCDC58, Length 683 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC58-207ENST00000498466 MERTKQ12866 999 aa12.2□□□□□ -0.46
CCDC58-207ENST00000498466 PDE7AQ13946 482 aa12.2□□□□□ -0.46
CCDC58-207ENST00000498466 PDK3Q15120 406 aa12.2□□□□□ -0.46
CCDC58-207ENST00000498466 SWI5Q1ZZU3 235 aa12.2□□□□□ -0.46
CCDC58-207ENST00000498466 SYT14P1Q58G82 188 aa12.2□□□□□ -0.46
CCDC58-207ENST00000498466 C9orf135Q5VTT2 229 aa12.2□□□□□ -0.46
CCDC58-207ENST00000498466 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP12.2□□□□□ -0.46
CCDC58-207ENST00000498466 WDR31Q8NA23 367 aa12.2□□□□□ -0.46
CCDC58-207ENST00000498466 ZNF540Q8NDQ6 660 aa12.2□□□□□ -0.46
CCDC58-207ENST00000498466 OR52E4Q8NGH9 312 aa12.2□□□□□ -0.46
CCDC58-207ENST00000498466 CCDC126Q96EE4 140 aa12.2□□□□□ -0.46
CCDC58-207ENST00000498466 ZHX1-C8orf76Q96EF9 292 aa12.2□□□□□ -0.46
CCDC58-207ENST00000498466 VRK1Q99986 396 aaPredicted RBP12.2□□□□□ -0.46
CCDC58-207ENST00000498466 SOX7Q9BT81 388 aa12.2□□□□□ -0.46
CCDC58-207ENST00000498466 THUMPD3Q9BV44 507 aaKnown RBP12.2□□□□□ -0.46
CCDC58-207ENST00000498466 ACTRT3Q9BYD9 372 aa12.2□□□□□ -0.46
CCDC58-207ENST00000498466 BPESC1Q9GZL8 116 aa12.2□□□□□ -0.46
CCDC58-207ENST00000498466 TNFRSF12AQ9NP84 129 aa12.2□□□□□ -0.46
CCDC58-207ENST00000498466 MYOZ1Q9NP98 299 aaPredicted RBP12.2□□□□□ -0.46
CCDC58-207ENST00000498466 MALT1Q9UDY8 824 aa12.2□□□□□ -0.46
CCDC58-207ENST00000498466 BAIAP2L1Q9UHR4 511 aa12.2□□□□□ -0.46
CCDC58-207ENST00000498466 FAF1Q9UNN5 650 aaPredicted RBP12.2□□□□□ -0.46
CCDC58-207ENST00000498466 AMDHD2Q9Y303 409 aa12.2□□□□□ -0.46
CCDC58-207ENST00000498466 PTGDR2Q9Y5Y4 395 aa12.2□□□□□ -0.46
CCDC58-207ENST00000498466 ZNF716A6NP11 495 aa12.19□□□□□ -0.46
CCDC58-207ENST00000498466 ESPNB1AK53 854 aa12.19□□□□□ -0.46
CCDC58-207ENST00000498466 NPIPB9F8W1W9 429 aa12.19□□□□□ -0.46
CCDC58-207ENST00000498466 GPR171O14626 319 aa12.19□□□□□ -0.46
CCDC58-207ENST00000498466 TFPIP10646 304 aa12.19□□□□□ -0.46
CCDC58-207ENST00000498466 MYL2P10916 166 aa12.19□□□□□ -0.46
CCDC58-207ENST00000498466 NTF4P34130 210 aa12.19□□□□□ -0.46
CCDC58-207ENST00000498466 SESN3P58005 492 aa12.19□□□□□ -0.46
CCDC58-207ENST00000498466 RPL38P63173 70 aaKnown RBP12.19□□□□□ -0.46
CCDC58-207ENST00000498466 TP53BP2Q13625 1128 aa12.19□□□□□ -0.46
CCDC58-207ENST00000498466 MST1LQ2TV78 715 aa12.19□□□□□ -0.46
CCDC58-207ENST00000498466 CFAP157Q5JU67 520 aa12.19□□□□□ -0.46
CCDC58-207ENST00000498466 CLEC6AQ6EIG7 209 aa12.19□□□□□ -0.46
CCDC58-207ENST00000498466 FRMD7Q6ZUT3 714 aa12.19□□□□□ -0.46
CCDC58-207ENST00000498466 SLC46A3Q7Z3Q1 461 aa12.19□□□□□ -0.46
CCDC58-207ENST00000498466 ANKS4BQ8N8V4 417 aa12.19□□□□□ -0.46
CCDC58-207ENST00000498466 PIGXQ8TBF5 258 aa12.19□□□□□ -0.46
CCDC58-207ENST00000498466 SLC25A43Q8WUT9 341 aaPredicted RBP12.19□□□□□ -0.46
CCDC58-207ENST00000498466 TMEM234Q8WY98 164 aa12.19□□□□□ -0.46
CCDC58-207ENST00000498466 ST8SIA1Q92185 356 aa12.19□□□□□ -0.46
CCDC58-207ENST00000498466 DNAJA3Q96EY1 480 aa12.19□□□□□ -0.46
CCDC58-207ENST00000498466 FMO2Q99518 471 aa12.19□□□□□ -0.46
CCDC58-207ENST00000498466 ADAM19Q9H013 955 aa12.19□□□□□ -0.46
CCDC58-207ENST00000498466 UPB1Q9UBR1 384 aa12.19□□□□□ -0.46
CCDC58-207ENST00000498466 PYCARDQ9ULZ3 195 aa12.19□□□□□ -0.46
CCDC58-207ENST00000498466 MOKQ9UQ07 419 aa12.19□□□□□ -0.46
CCDC58-207ENST00000498466 KCNE3Q9Y6H6 103 aa12.19□□□□□ -0.46
CCDC58-207ENST00000498466 PLCE1Q9P212 2302 aa12.19□□□□□ -0.46
CCDC58-207ENST00000498466 MEGF8Q7Z7M0 2845 aa12.18□□□□□ -0.46
CCDC58-207ENST00000498466 LRP5LA4QPB2 252 aa12.18□□□□□ -0.46
CCDC58-207ENST00000498466 SERINC4A6NH21 518 aa12.18□□□□□ -0.46
CCDC58-207ENST00000498466 KRT16P08779 473 aa12.18□□□□□ -0.46
CCDC58-207ENST00000498466 DDX5P17844 614 aaKnown RBP12.18□□□□□ -0.46
CCDC58-207ENST00000498466 CCT3P49368 545 aaKnown RBP12.18□□□□□ -0.46
CCDC58-207ENST00000498466 NAA20P61599 178 aa12.18□□□□□ -0.46
CCDC58-207ENST00000498466 SLC25A3Q00325 362 aa12.18□□□□□ -0.46
CCDC58-207ENST00000498466 SPDYE7PQ495Y7 208 aa12.18□□□□□ -0.46
CCDC58-207ENST00000498466 RFTN2Q52LD8 501 aaPredicted RBP12.18□□□□□ -0.46
CCDC58-207ENST00000498466 PDZK1Q5T2W1 519 aa12.18□□□□□ -0.46
CCDC58-207ENST00000498466 CASP12Q6UXS9 341 aa12.18□□□□□ -0.46
CCDC58-207ENST00000498466 ZNF572Q7Z3I7 529 aaPredicted RBP12.18□□□□□ -0.46
CCDC58-207ENST00000498466 R3HCC1LQ7Z5L2 792 aaKnown RBP12.18□□□□□ -0.46
CCDC58-207ENST00000498466 C17orf78Q8N4C9 275 aa12.18□□□□□ -0.46
CCDC58-207ENST00000498466 IFT81Q8WYA0 676 aa12.18□□□□□ -0.46
CCDC58-207ENST00000498466 MTERF3Q96E29 417 aa12.18□□□□□ -0.46
CCDC58-207ENST00000498466 FCRL1Q96LA6 429 aa12.18□□□□□ -0.46
CCDC58-207ENST00000498466 LAT2Q9GZY6 243 aa12.18□□□□□ -0.46
CCDC58-207ENST00000498466 SLC17A5Q9NRA2 495 aa12.18□□□□□ -0.46
CCDC58-207ENST00000498466 TMEFF2Q9UIK5 374 aaPredicted RBP12.18□□□□□ -0.46
CCDC58-207ENST00000498466 SPIN1Q9Y657 262 aaPredicted RBP12.18□□□□□ -0.46
CCDC58-207ENST00000498466 G3V2L1 256 aa12.17□□□□□ -0.46
CCDC58-207ENST00000498466 PDLIM1O00151 329 aa12.17□□□□□ -0.46
CCDC58-207ENST00000498466 PGCP20142 388 aa12.17□□□□□ -0.46
CCDC58-207ENST00000498466 GCAP28676 217 aa12.17□□□□□ -0.46
CCDC58-207ENST00000498466 MAGEA8P43361 318 aa12.17□□□□□ -0.46
CCDC58-207ENST00000498466 ASMTP46597 345 aa12.17□□□□□ -0.46
CCDC58-207ENST00000498466 PRPS1P60891 318 aa12.17□□□□□ -0.46
CCDC58-207ENST00000498466 TGFBR3Q03167 851 aa12.17□□□□□ -0.46
CCDC58-207ENST00000498466 SKP2Q13309 424 aa12.17□□□□□ -0.46
CCDC58-207ENST00000498466 KLHL24Q6TFL4 600 aa12.17□□□□□ -0.46
CCDC58-207ENST00000498466 ZYG11AQ6WRX3 759 aa12.17□□□□□ -0.46
CCDC58-207ENST00000498466 SPATA19Q7Z5L4 167 aa12.17□□□□□ -0.46
CCDC58-207ENST00000498466 CCDC103Q8IW40 242 aa12.17□□□□□ -0.46
CCDC58-207ENST00000498466 C1orf162Q8NEQ5 155 aaPredicted RBP12.17□□□□□ -0.46
CCDC58-207ENST00000498466 OR56A1Q8NGH5 318 aa12.17□□□□□ -0.46
CCDC58-207ENST00000498466 OR2T11Q8NH01 316 aa12.17□□□□□ -0.46
CCDC58-207ENST00000498466 BHLHE41Q9C0J9 482 aaPredicted RBP12.17□□□□□ -0.46
CCDC58-207ENST00000498466 ACER3Q9NUN7 267 aa12.17□□□□□ -0.46
CCDC58-207ENST00000498466 GPATCH2Q9NW75 528 aa12.17□□□□□ -0.46
CCDC58-207ENST00000498466 DCTN4Q9UJW0 460 aa12.17□□□□□ -0.46
CCDC58-207ENST00000498466 FIS1Q9Y3D6 152 aa12.17□□□□□ -0.46
CCDC58-207ENST00000498466 PMS2P2O95744 297 aa12.16□□□□□ -0.46
CCDC58-207ENST00000498466 WNT11O96014 354 aa12.16□□□□□ -0.46
CCDC58-207ENST00000498466 CSTAP01040 98 aa12.16□□□□□ -0.46
CCDC58-207ENST00000498466 UBTFL6P0CB48 400 aaPredicted RBP12.16□□□□□ -0.46
CCDC58-207ENST00000498466 NEFHP12036 1026 aa12.16□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms