RNA–Protein interactions for RNA: ENST00000497637.5

ACTN4-208, Transcript of actinin alpha 4, humanhuman

TSL 2

Gene ACTN4, Length 877 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN4-208ENST00000497637 IDSB3KWA1 339 aa18.08■□□□□ 0.48
ACTN4-208ENST00000497637 MEN1O00255 615 aa18.08■□□□□ 0.48
ACTN4-208ENST00000497637 MPZL2O60487 215 aa18.08■□□□□ 0.48
ACTN4-208ENST00000497637 CEACAM4O75871 244 aa18.08■□□□□ 0.48
ACTN4-208ENST00000497637 GABRB1P18505 474 aa18.08■□□□□ 0.48
ACTN4-208ENST00000497637 EEF1B2P24534 225 aaKnown RBP18.08■□□□□ 0.48
ACTN4-208ENST00000497637 ADH7P40394 386 aa18.08■□□□□ 0.48
ACTN4-208ENST00000497637 ACAA2P42765 397 aaKnown RBP18.08■□□□□ 0.48
ACTN4-208ENST00000497637 OMPP47874 163 aa18.08■□□□□ 0.48
ACTN4-208ENST00000497637 GPR143P51810 404 aa18.08■□□□□ 0.48
ACTN4-208ENST00000497637 CDC42P60953 191 aa18.08■□□□□ 0.48
ACTN4-208ENST00000497637 TSPAN31Q12999 210 aa18.08■□□□□ 0.48
ACTN4-208ENST00000497637 EBPQ15125 230 aaKnown RBP18.08■□□□□ 0.48
ACTN4-208ENST00000497637 NNATQ16517 81 aa18.08■□□□□ 0.48
ACTN4-208ENST00000497637 KLHL26Q53HC5 615 aa18.08■□□□□ 0.48
ACTN4-208ENST00000497637 HLA-DQA1Q5Y7H0 255 aa18.08■□□□□ 0.48
ACTN4-208ENST00000497637 LANCL3Q6ZV70 420 aa18.08■□□□□ 0.48
ACTN4-208ENST00000497637 RRM2BQ7LG56 351 aa18.08■□□□□ 0.48
ACTN4-208ENST00000497637 ZNF440Q8IYI8 595 aa18.08■□□□□ 0.48
ACTN4-208ENST00000497637 RNF113BQ8IZP6 322 aaKnown RBP18.08■□□□□ 0.48
ACTN4-208ENST00000497637 APH1BQ8WW43 257 aa18.08■□□□□ 0.48
ACTN4-208ENST00000497637 RNF31Q96EP0 1072 aa18.08■□□□□ 0.48
ACTN4-208ENST00000497637 GPA33Q99795 319 aa18.08■□□□□ 0.48
ACTN4-208ENST00000497637 PRSS27Q9BQR3 290 aa18.08■□□□□ 0.48
ACTN4-208ENST00000497637 TRIM2Q9C040 744 aa18.08■□□□□ 0.48
ACTN4-208ENST00000497637 PLCXD1Q9NUJ7 323 aa18.08■□□□□ 0.48
ACTN4-208ENST00000497637 SLC7A7Q9UM01 511 aa18.08■□□□□ 0.48
ACTN4-208ENST00000497637 PPIEQ9UNP9 301 aaKnown RBP18.08■□□□□ 0.48
ACTN4-208ENST00000497637 SEC16AO15027 2179 aa18.08■□□□□ 0.48
ACTN4-208ENST00000497637 TNRC6AQ8NDV7 1962 aaKnown RBP18.08■□□□□ 0.48
ACTN4-208ENST00000497637 NIPBLQ6KC79 2804 aaeCLIP18.07■□□□□ 0.48
ACTN4-208ENST00000497637 KLF4O43474 513 aa18.07■□□□□ 0.48
ACTN4-208ENST00000497637 POU1F1P28069 291 aa18.07■□□□□ 0.48
ACTN4-208ENST00000497637 PSPHP78330 225 aa18.07■□□□□ 0.48
ACTN4-208ENST00000497637 LSM11P83369 360 aaKnown RBP eCLIP18.07■□□□□ 0.48
ACTN4-208ENST00000497637 C12orf73Q69YU5 71 aa18.07■□□□□ 0.48
ACTN4-208ENST00000497637 KCTD8Q6ZWB6 473 aa18.07■□□□□ 0.48
ACTN4-208ENST00000497637 SLC29A4Q7RTT9 530 aa18.07■□□□□ 0.48
ACTN4-208ENST00000497637 C9orf40Q8IXQ3 194 aa18.07■□□□□ 0.48
ACTN4-208ENST00000497637 ZNF614Q8N883 585 aa18.07■□□□□ 0.48
ACTN4-208ENST00000497637 ZNF441Q8N8Z8 693 aa18.07■□□□□ 0.48
ACTN4-208ENST00000497637 C17orf47Q8NEP4 570 aa18.07■□□□□ 0.48
ACTN4-208ENST00000497637 NFAM1Q8NET5 270 aaPredicted RBP18.07■□□□□ 0.48
ACTN4-208ENST00000497637 OR4C3Q8NH37 302 aa18.07■□□□□ 0.48
ACTN4-208ENST00000497637 CT55Q8WUE5 264 aa18.07■□□□□ 0.48
ACTN4-208ENST00000497637 IPCEF1Q8WWN9 437 aaPredicted RBP18.07■□□□□ 0.48
ACTN4-208ENST00000497637 DGCR14Q96DF8 476 aaKnown RBP18.07■□□□□ 0.48
ACTN4-208ENST00000497637 HSPBAP1Q96EW2 488 aa18.07■□□□□ 0.48
ACTN4-208ENST00000497637 WWTR1Q9GZV5 400 aa18.07■□□□□ 0.48
ACTN4-208ENST00000497637 UBQLN4Q9NRR5 601 aa18.07■□□□□ 0.48
ACTN4-208ENST00000497637 RASSF1Q9NS23 344 aa18.07■□□□□ 0.48
ACTN4-208ENST00000497637 ASF1BQ9NVP2 202 aa18.07■□□□□ 0.48
ACTN4-208ENST00000497637 IMPAD1Q9NX62 359 aa18.07■□□□□ 0.48
ACTN4-208ENST00000497637 AASSQ9UDR5 926 aa18.07■□□□□ 0.48
ACTN4-208ENST00000497637 SLC35A3Q9Y2D2 325 aa18.07■□□□□ 0.48
ACTN4-208ENST00000497637 ARGFXA6NJG6 315 aa18.06■□□□□ 0.48
ACTN4-208ENST00000497637 CNOT3O75175 753 aaKnown RBP18.06■□□□□ 0.48
ACTN4-208ENST00000497637 FPR3P25089 353 aa18.06■□□□□ 0.48
ACTN4-208ENST00000497637 PTGER4P35408 488 aa18.06■□□□□ 0.48
ACTN4-208ENST00000497637 IDH2P48735 452 aaKnown RBP18.06■□□□□ 0.48
ACTN4-208ENST00000497637 RNF144AP50876 292 aaPredicted RBP18.06■□□□□ 0.48
ACTN4-208ENST00000497637 ZBED5Q49AG3 693 aa18.06■□□□□ 0.48
ACTN4-208ENST00000497637 FNDC7Q5VTL7 733 aa18.06■□□□□ 0.48
ACTN4-208ENST00000497637 FAAH2Q6GMR7 532 aa18.06■□□□□ 0.48
ACTN4-208ENST00000497637 LCN10Q6JVE6 187 aa18.06■□□□□ 0.48
ACTN4-208ENST00000497637 MRPL14Q6P1L8 145 aaKnown RBP18.06■□□□□ 0.48
ACTN4-208ENST00000497637 TMEM205Q6UW68 189 aa18.06■□□□□ 0.48
ACTN4-208ENST00000497637 SHISA6Q6ZSJ9 500 aa18.06■□□□□ 0.48
ACTN4-208ENST00000497637 RASSF6Q6ZTQ3 369 aa18.06■□□□□ 0.48
ACTN4-208ENST00000497637 SPARTQ8N0X7 666 aa18.06■□□□□ 0.48
ACTN4-208ENST00000497637 RBMXL3Q8N7X1 1067 aaKnown RBP18.06■□□□□ 0.48
ACTN4-208ENST00000497637 METTL21AQ8WXB1 218 aa18.06■□□□□ 0.48
ACTN4-208ENST00000497637 LURAP1Q96LR2 239 aa18.06■□□□□ 0.48
ACTN4-208ENST00000497637 HS6ST2Q96MM7 605 aa18.06■□□□□ 0.48
ACTN4-208ENST00000497637 LMF1Q96S06 567 aa18.06■□□□□ 0.48
ACTN4-208ENST00000497637 SPSB2Q99619 263 aa18.06■□□□□ 0.48
ACTN4-208ENST00000497637 RBM38Q9H0Z9 239 aaKnown RBP18.06■□□□□ 0.48
ACTN4-208ENST00000497637 CCNB1IP1Q9NPC3 277 aa18.06■□□□□ 0.48
ACTN4-208ENST00000497637 KRCC1Q9NPI7 259 aaPredicted RBP18.06■□□□□ 0.48
ACTN4-208ENST00000497637 AKAP9Q99996 3911 aa18.06■□□□□ 0.48
ACTN4-208ENST00000497637 A0A0B4J2E0 115 aa18.05■□□□□ 0.48
ACTN4-208ENST00000497637 A0A1B0GX12 115 aa18.05■□□□□ 0.48
ACTN4-208ENST00000497637 SAGE2PA6NJ88 616 aa18.05■□□□□ 0.48
ACTN4-208ENST00000497637 XPNPEP2O43895 674 aa18.05■□□□□ 0.48
ACTN4-208ENST00000497637 FAM20BO75063 409 aa18.05■□□□□ 0.48
ACTN4-208ENST00000497637 OR6B1O95007 311 aa18.05■□□□□ 0.48
ACTN4-208ENST00000497637 UTS2O95399 124 aa18.05■□□□□ 0.48
ACTN4-208ENST00000497637 CSTAP01040 98 aa18.05■□□□□ 0.48
ACTN4-208ENST00000497637 IGFBP1P08833 259 aaPredicted RBP18.05■□□□□ 0.48
ACTN4-208ENST00000497637 HTR1AP08908 422 aa18.05■□□□□ 0.48
ACTN4-208ENST00000497637 TBXA2RP21731 343 aa18.05■□□□□ 0.48
ACTN4-208ENST00000497637 TTKP33981 857 aa18.05■□□□□ 0.48
ACTN4-208ENST00000497637 KRT20P35900 424 aa18.05■□□□□ 0.48
ACTN4-208ENST00000497637 SNRPGP62308 76 aaKnown RBP18.05■□□□□ 0.48
ACTN4-208ENST00000497637 RPS15P62841 145 aaKnown RBP18.05■□□□□ 0.48
ACTN4-208ENST00000497637 SLC35A2P78381 396 aa18.05■□□□□ 0.48
ACTN4-208ENST00000497637 CHAF1BQ13112 559 aa18.05■□□□□ 0.48
ACTN4-208ENST00000497637 TMEM236Q5W0B7 351 aa18.05■□□□□ 0.48
ACTN4-208ENST00000497637 SPNS3Q6ZMD2 512 aa18.05■□□□□ 0.48
ACTN4-208ENST00000497637 P3H2Q8IVL5 708 aa18.05■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms