RNA–Protein interactions for RNA: ENST00000497597.5

TRAPPC12-223, Transcript of trafficking protein particle complex 12, humanhuman

TSL 2

Gene TRAPPC12, Length 3,401 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC12-223ENST00000497597 PRAF2O60831 178 aa9.87□□□□□ -0.83
TRAPPC12-223ENST00000497597 CD160O95971 181 aa9.87□□□□□ -0.83
TRAPPC12-223ENST00000497597 HMGN2P05204 90 aaKnown RBP9.87□□□□□ -0.83
TRAPPC12-223ENST00000497597 RNF224P0DH78 156 aa9.87□□□□□ -0.83
TRAPPC12-223ENST00000497597 NPIPA8P0DM63 369 aa9.87□□□□□ -0.83
TRAPPC12-223ENST00000497597 PTGFRP43088 359 aa9.87□□□□□ -0.83
TRAPPC12-223ENST00000497597 PSMD4P55036 377 aaKnown RBP9.87□□□□□ -0.83
TRAPPC12-223ENST00000497597 CDK5Q00535 292 aa9.87□□□□□ -0.83
TRAPPC12-223ENST00000497597 TGM3Q08188 693 aa9.87□□□□□ -0.83
TRAPPC12-223ENST00000497597 NKPD1Q17RQ9 610 aa9.87□□□□□ -0.83
TRAPPC12-223ENST00000497597 TPRG1Q6ZUI0 275 aa9.87□□□□□ -0.83
TRAPPC12-223ENST00000497597 HSD17B13Q7Z5P4 300 aaPredicted RBP9.87□□□□□ -0.83
TRAPPC12-223ENST00000497597 TAF8Q7Z7C8 310 aa9.87□□□□□ -0.83
TRAPPC12-223ENST00000497597 LDLRAD3Q86YD5 345 aa9.87□□□□□ -0.83
TRAPPC12-223ENST00000497597 SLC19A3Q9BZV2 496 aa9.87□□□□□ -0.83
TRAPPC12-223ENST00000497597 PIPOXQ9P0Z9 390 aa9.87□□□□□ -0.83
TRAPPC12-223ENST00000497597 ASH2LQ9UBL3 628 aa9.87□□□□□ -0.83
TRAPPC12-223ENST00000497597 SLC22A7Q9Y694 548 aa9.87□□□□□ -0.83
TRAPPC12-223ENST00000497597 M0QZQ0 153 aa9.86□□□□□ -0.83
TRAPPC12-223ENST00000497597 ARL6IP5O75915 188 aa9.86□□□□□ -0.83
TRAPPC12-223ENST00000497597 HIST1H2ABP04908 130 aa9.86□□□□□ -0.83
TRAPPC12-223ENST00000497597 C1GALT1C1LP0DN25 315 aa9.86□□□□□ -0.83
TRAPPC12-223ENST00000497597 EEF1A2Q05639 463 aaKnown RBP9.86□□□□□ -0.83
TRAPPC12-223ENST00000497597 KCNAB1Q14722 419 aa9.86□□□□□ -0.83
TRAPPC12-223ENST00000497597 FAM71E1Q6IPT2 247 aa9.86□□□□□ -0.83
TRAPPC12-223ENST00000497597 SLCO4C1Q6ZQN7 724 aa9.86□□□□□ -0.83
TRAPPC12-223ENST00000497597 HIST3H2AQ7L7L0 130 aa9.86□□□□□ -0.83
TRAPPC12-223ENST00000497597 NAA40Q86UY6 237 aa9.86□□□□□ -0.83
TRAPPC12-223ENST00000497597 OR6V1Q8N148 313 aa9.86□□□□□ -0.83
TRAPPC12-223ENST00000497597 GTPBP8Q8N3Z3 284 aaPredicted RBP9.86□□□□□ -0.83
TRAPPC12-223ENST00000497597 TBC1D19Q8N5T2 526 aa9.86□□□□□ -0.83
TRAPPC12-223ENST00000497597 HIST1H2ACQ93077 130 aa9.86□□□□□ -0.83
TRAPPC12-223ENST00000497597 NXPE3Q969Y0 559 aa9.86□□□□□ -0.83
TRAPPC12-223ENST00000497597 C14orf79Q96F83 325 aa9.86□□□□□ -0.83
TRAPPC12-223ENST00000497597 PRRC1Q96M27 445 aa9.86□□□□□ -0.83
TRAPPC12-223ENST00000497597 MS4A4EQ96PG1 132 aa9.86□□□□□ -0.83
TRAPPC12-223ENST00000497597 C20orf24Q9BUV8 137 aa9.86□□□□□ -0.83
TRAPPC12-223ENST00000497597 OR52D1Q9H346 318 aa9.86□□□□□ -0.83
TRAPPC12-223ENST00000497597 NOX4Q9NPH5 578 aa9.86□□□□□ -0.83
TRAPPC12-223ENST00000497597 CAMK2AQ9UQM7 478 aa9.86□□□□□ -0.83
TRAPPC12-223ENST00000497597 CA5BQ9Y2D0 317 aa9.86□□□□□ -0.83
TRAPPC12-223ENST00000497597 RIIAD1A6NNX1 92 aa9.86□□□□□ -0.83
TRAPPC12-223ENST00000497597 A8MVJ9 347 aa9.86□□□□□ -0.83
TRAPPC12-223ENST00000497597 H0YIV9 168 aa9.86□□□□□ -0.83
TRAPPC12-223ENST00000497597 RBBP9O75884 186 aa9.86□□□□□ -0.83
TRAPPC12-223ENST00000497597 BDKRB2P30411 391 aa9.86□□□□□ -0.83
TRAPPC12-223ENST00000497597 RPL4P36578 427 aaKnown RBP9.86□□□□□ -0.83
TRAPPC12-223ENST00000497597 DLSTP36957 453 aa9.86□□□□□ -0.83
TRAPPC12-223ENST00000497597 H2BFSP57053 126 aa9.86□□□□□ -0.83
TRAPPC12-223ENST00000497597 GUCA2AQ02747 115 aa9.86□□□□□ -0.83
TRAPPC12-223ENST00000497597 TGIF1Q15583 401 aa9.86□□□□□ -0.83
TRAPPC12-223ENST00000497597 FNDC3BQ53EP0 1204 aaKnown RBP9.86□□□□□ -0.83
TRAPPC12-223ENST00000497597 OR4K13Q8NH42 304 aa9.86□□□□□ -0.83
TRAPPC12-223ENST00000497597 STK35Q8TDR2 534 aa9.86□□□□□ -0.83
TRAPPC12-223ENST00000497597 SMIM4Q8WVI0 70 aa9.86□□□□□ -0.83
TRAPPC12-223ENST00000497597 OR5P2Q8WZ92 322 aa9.86□□□□□ -0.83
TRAPPC12-223ENST00000497597 S100PBPQ96BU1 408 aa9.86□□□□□ -0.83
TRAPPC12-223ENST00000497597 VRK1Q99986 396 aaPredicted RBP9.86□□□□□ -0.83
TRAPPC12-223ENST00000497597 UBQLN3Q9H347 655 aa9.86□□□□□ -0.83
TRAPPC12-223ENST00000497597 KCND3Q9UK17 655 aa9.86□□□□□ -0.83
TRAPPC12-223ENST00000497597 CBLCQ9ULV8 474 aa9.86□□□□□ -0.83
TRAPPC12-223ENST00000497597 SLC7A7Q9UM01 511 aa9.86□□□□□ -0.83
TRAPPC12-223ENST00000497597 KCNE3Q9Y6H6 103 aa9.86□□□□□ -0.83
TRAPPC12-223ENST00000497597 MKI67P46013 3256 aaKnown RBP9.86□□□□□ -0.83
TRAPPC12-223ENST00000497597 TSC2P49815 1807 aa9.86□□□□□ -0.83
TRAPPC12-223ENST00000497597 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP9.86□□□□□ -0.83
TRAPPC12-223ENST00000497597 A0A1W2PRQ8 180 aa9.86□□□□□ -0.83
TRAPPC12-223ENST00000497597 C5orf51A6NDU8 294 aa9.86□□□□□ -0.83
TRAPPC12-223ENST00000497597 C1orf196B1AJZ1 125 aa9.86□□□□□ -0.83
TRAPPC12-223ENST00000497597 ZNF879B4DU55 563 aa9.86□□□□□ -0.83
TRAPPC12-223ENST00000497597 M0R036 132 aa9.86□□□□□ -0.83
TRAPPC12-223ENST00000497597 SYT5O00445 386 aa9.86□□□□□ -0.83
TRAPPC12-223ENST00000497597 OAZ2O95190 189 aa9.86□□□□□ -0.83
TRAPPC12-223ENST00000497597 ANXA2P07355 339 aaKnown RBP9.86□□□□□ -0.83
TRAPPC12-223ENST00000497597 EPXP11678 715 aa9.86□□□□□ -0.83
TRAPPC12-223ENST00000497597 OR2B8PP59922 312 aa9.86□□□□□ -0.83
TRAPPC12-223ENST00000497597 SKP1P63208 163 aa9.86□□□□□ -0.83
TRAPPC12-223ENST00000497597 TSPAN31Q12999 210 aa9.86□□□□□ -0.83
TRAPPC12-223ENST00000497597 OTPQ5XKR4 325 aa9.86□□□□□ -0.83
TRAPPC12-223ENST00000497597 FIGNL1Q6PIW4 674 aa9.86□□□□□ -0.83
TRAPPC12-223ENST00000497597 GLDNQ6ZMI3 551 aaPredicted RBP9.86□□□□□ -0.83
TRAPPC12-223ENST00000497597 RNF44Q7L0R7 432 aa9.86□□□□□ -0.83
TRAPPC12-223ENST00000497597 OR51S1Q8NGJ8 323 aa9.86□□□□□ -0.83
TRAPPC12-223ENST00000497597 OR52N1Q8NH53 320 aa9.86□□□□□ -0.83
TRAPPC12-223ENST00000497597 OR4C6Q8NH72 309 aa9.86□□□□□ -0.83
TRAPPC12-223ENST00000497597 PHOSPHO1Q8TCT1 267 aa9.86□□□□□ -0.83
TRAPPC12-223ENST00000497597 FATE1Q969F0 183 aa9.86□□□□□ -0.83
TRAPPC12-223ENST00000497597 RSPO3Q9BXY4 272 aaPredicted RBP9.86□□□□□ -0.83
TRAPPC12-223ENST00000497597 XRN2Q9H0D6 950 aaKnown RBP eCLIP9.86□□□□□ -0.838e-6■■□□□ 13.2
TRAPPC12-223ENST00000497597 SUV39H2Q9H5I1 410 aa9.86□□□□□ -0.83
TRAPPC12-223ENST00000497597 TCF7L1Q9HCS4 588 aa9.86□□□□□ -0.83
TRAPPC12-223ENST00000497597 CHMP1AQ9HD42 196 aaPredicted RBP9.86□□□□□ -0.83
TRAPPC12-223ENST00000497597 DZANK1Q9NVP4 752 aa9.86□□□□□ -0.83
TRAPPC12-223ENST00000497597 ING1Q9UK53 422 aaPredicted RBP9.86□□□□□ -0.83
TRAPPC12-223ENST00000497597 IKZF2Q9UKS7 526 aa9.86□□□□□ -0.83
TRAPPC12-223ENST00000497597 FBXO4Q9UKT5 387 aa9.86□□□□□ -0.83
TRAPPC12-223ENST00000497597 CLEC4EQ9ULY5 219 aa9.86□□□□□ -0.83
TRAPPC12-223ENST00000497597 PLEKHM1Q9Y4G2 1056 aa9.86□□□□□ -0.83
TRAPPC12-223ENST00000497597 UNC80Q8N2C7 3258 aa9.86□□□□□ -0.83
TRAPPC12-223ENST00000497597 RANBP2P49792 3224 aaKnown RBP9.85□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms