RNA–Protein interactions for RNA: ENST00000497488.1

BRCA1-224, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 779 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-224ENST00000497488 ZNF114Q8NC26 417 aa5.27□□□□□ -1.57
BRCA1-224ENST00000497488 OR1B1Q8NGR6 318 aa5.27□□□□□ -1.57
BRCA1-224ENST00000497488 FBXO25Q8TCJ0 367 aa5.27□□□□□ -1.57
BRCA1-224ENST00000497488 TMEM246Q9BRR3 403 aa5.27□□□□□ -1.57
BRCA1-224ENST00000497488 KRTAP9-9Q9BYP9 154 aa5.27□□□□□ -1.57
BRCA1-224ENST00000497488 KRTAP9-4Q9BYQ2 154 aa5.27□□□□□ -1.57
BRCA1-224ENST00000497488 RAB1BQ9H0U4 201 aa5.27□□□□□ -1.57
BRCA1-224ENST00000497488 CSNK1G1Q9HCP0 422 aa5.27□□□□□ -1.57
BRCA1-224ENST00000497488 ADAP2Q9NPF8 381 aa5.27□□□□□ -1.57
BRCA1-224ENST00000497488 ZNF302Q9NR11 478 aa5.27□□□□□ -1.57
BRCA1-224ENST00000497488 DYRK4Q9NR20 520 aa5.27□□□□□ -1.57
BRCA1-224ENST00000497488 TUBA8Q9NY65 449 aaPredicted RBP5.27□□□□□ -1.57
BRCA1-224ENST00000497488 GGA2Q9UJY4 613 aa5.27□□□□□ -1.57
BRCA1-224ENST00000497488 EXOSC1Q9Y3B2 195 aaKnown RBP5.27□□□□□ -1.57
BRCA1-224ENST00000497488 KIF24Q5T7B8 1368 aa5.27□□□□□ -1.57
BRCA1-224ENST00000497488 BCL9O00512 1426 aa5.26□□□□□ -1.57
BRCA1-224ENST00000497488 SBF2Q86WG5 1849 aa5.26□□□□□ -1.57
BRCA1-224ENST00000497488 A0A0A6YYD4 124 aa5.26□□□□□ -1.57
BRCA1-224ENST00000497488 IGLV9-49A0A0B4J1Y8 123 aa5.26□□□□□ -1.57
BRCA1-224ENST00000497488 GOLGA8QA0A0J9YX86 632 aa5.26□□□□□ -1.57
BRCA1-224ENST00000497488 KBTBD11-OT1A0A1B0GTJ5 212 aa5.26□□□□□ -1.57
BRCA1-224ENST00000497488 ASPDHA6ND91 283 aa5.26□□□□□ -1.57
BRCA1-224ENST00000497488 OR5H15A6NDH6 313 aa5.26□□□□□ -1.57
BRCA1-224ENST00000497488 SMCO2A6NFE2 343 aa5.26□□□□□ -1.57
BRCA1-224ENST00000497488 CCT8L1PA6NM43 557 aa5.26□□□□□ -1.57
BRCA1-224ENST00000497488 TCP10L2B9ZVM9 353 aa5.26□□□□□ -1.57
BRCA1-224ENST00000497488 E5RJQ4 531 aa5.26□□□□□ -1.57
BRCA1-224ENST00000497488 E9PQ18 207 aa5.26□□□□□ -1.57
BRCA1-224ENST00000497488 CYB561D2O14569 222 aa5.26□□□□□ -1.57
BRCA1-224ENST00000497488 TM9SF1O15321 606 aa5.26□□□□□ -1.57
BRCA1-224ENST00000497488 KCNJ13O60928 360 aa5.26□□□□□ -1.57
BRCA1-224ENST00000497488 C1QL1O75973 258 aa5.26□□□□□ -1.57
BRCA1-224ENST00000497488 PMS2P2O95744 297 aa5.26□□□□□ -1.57
BRCA1-224ENST00000497488 UBCP0CG48 685 aaKnown RBP5.26□□□□□ -1.57
BRCA1-224ENST00000497488 EIF2S2P20042 333 aaKnown RBP5.26□□□□□ -1.57
BRCA1-224ENST00000497488 OXTRP30559 389 aa5.26□□□□□ -1.57
BRCA1-224ENST00000497488 RRM2P31350 389 aa5.26□□□□□ -1.57
BRCA1-224ENST00000497488 NAA10P41227 235 aaPredicted RBP5.26□□□□□ -1.57
BRCA1-224ENST00000497488 RFX2P48378 723 aa5.26□□□□□ -1.57
BRCA1-224ENST00000497488 HMGCS2P54868 508 aa5.26□□□□□ -1.57
BRCA1-224ENST00000497488 MYL6P60660 151 aa5.26□□□□□ -1.57
BRCA1-224ENST00000497488 RAB10P61026 200 aa5.26□□□□□ -1.57
BRCA1-224ENST00000497488 GUCY2DQ02846 1103 aa5.26□□□□□ -1.57
BRCA1-224ENST00000497488 RGS1Q08116 209 aa5.26□□□□□ -1.57
BRCA1-224ENST00000497488 SLC5A12Q1EHB4 618 aa5.26□□□□□ -1.57
BRCA1-224ENST00000497488 ZNF260Q3ZCT1 412 aa5.26□□□□□ -1.57
BRCA1-224ENST00000497488 SPATS1Q496A3 300 aa5.26□□□□□ -1.57
BRCA1-224ENST00000497488 TMEM52BQ4KMG9 183 aa5.26□□□□□ -1.57
BRCA1-224ENST00000497488 CYBRD1Q53TN4 286 aa5.26□□□□□ -1.57
BRCA1-224ENST00000497488 C8orf82Q6P1X6 216 aaPredicted RBP5.26□□□□□ -1.57
BRCA1-224ENST00000497488 SHC4Q6S5L8 630 aa5.26□□□□□ -1.57
BRCA1-224ENST00000497488 LEKR1Q6ZMV7 388 aa5.26□□□□□ -1.57
BRCA1-224ENST00000497488 MRPL21Q7Z2W9 205 aaKnown RBP5.26□□□□□ -1.57
BRCA1-224ENST00000497488 HSD11B1LQ7Z5J1 315 aa5.26□□□□□ -1.57
BRCA1-224ENST00000497488 CATSPERDQ86XM0 798 aa5.26□□□□□ -1.57
BRCA1-224ENST00000497488 MARCH9Q86YJ5 346 aa5.26□□□□□ -1.57
BRCA1-224ENST00000497488 HPS6Q86YV9 775 aa5.26□□□□□ -1.57
BRCA1-224ENST00000497488 RBM45Q8IUH3 476 aaKnown RBP5.26□□□□□ -1.57
BRCA1-224ENST00000497488 CNGA4Q8IV77 575 aa5.26□□□□□ -1.57
BRCA1-224ENST00000497488 SLC35F2Q8IXU6 374 aa5.26□□□□□ -1.57
BRCA1-224ENST00000497488 ZNF383Q8NA42 475 aa5.26□□□□□ -1.57
BRCA1-224ENST00000497488 OMA1Q96E52 524 aa5.26□□□□□ -1.57
BRCA1-224ENST00000497488 FOXN4Q96NZ1 517 aa5.26□□□□□ -1.57
BRCA1-224ENST00000497488 ZNF317Q96PQ6 595 aaPredicted RBP5.26□□□□□ -1.57
BRCA1-224ENST00000497488 SLC29A1Q99808 456 aa5.26□□□□□ -1.57
BRCA1-224ENST00000497488 MCRIP2Q9BUT9 160 aaKnown RBP5.26□□□□□ -1.57
BRCA1-224ENST00000497488 SLITRK2Q9H156 845 aa5.26□□□□□ -1.57
BRCA1-224ENST00000497488 UGT1A10Q9HAW8 530 aa5.26□□□□□ -1.57
BRCA1-224ENST00000497488 LY9Q9HBG7 655 aa5.26□□□□□ -1.57
BRCA1-224ENST00000497488 POPDC2Q9HBU9 364 aa5.26□□□□□ -1.57
BRCA1-224ENST00000497488 ZNF275Q9NSD4 429 aaPredicted RBP5.26□□□□□ -1.57
BRCA1-224ENST00000497488 CLN8Q9UBY8 286 aa5.26□□□□□ -1.57
BRCA1-224ENST00000497488 MTRF1LQ9UGC7 380 aaKnown RBP5.26□□□□□ -1.57
BRCA1-224ENST00000497488 SLC22A14Q9Y267 594 aa5.26□□□□□ -1.57
BRCA1-224ENST00000497488 VDAC3Q9Y277 283 aa5.26□□□□□ -1.57
BRCA1-224ENST00000497488 DHRS7Q9Y394 339 aa5.26□□□□□ -1.57
BRCA1-224ENST00000497488 NHSQ6T4R5 1651 aa5.26□□□□□ -1.57
BRCA1-224ENST00000497488 RREB1Q92766 1687 aa5.26□□□□□ -1.57
BRCA1-224ENST00000497488 NUP188Q5SRE5 1749 aa5.26□□□□□ -1.57
BRCA1-224ENST00000497488 MAP2P11137 1827 aaKnown RBP5.25□□□□□ -1.57
BRCA1-224ENST00000497488 KCNE1BA0A087WTH5 132 aa5.25□□□□□ -1.57
BRCA1-224ENST00000497488 DBX1A6NMT0 343 aa5.25□□□□□ -1.57
BRCA1-224ENST00000497488 ZNF99A8MXY4 864 aaPredicted RBP5.25□□□□□ -1.57
BRCA1-224ENST00000497488 FBP2O00757 339 aa5.25□□□□□ -1.57
BRCA1-224ENST00000497488 ZNF195O14628 629 aa5.25□□□□□ -1.57
BRCA1-224ENST00000497488 SH3BGRLO75368 114 aa5.25□□□□□ -1.57
BRCA1-224ENST00000497488 CRTAPO75718 401 aaPredicted RBP5.25□□□□□ -1.57
BRCA1-224ENST00000497488 OAS1P00973 400 aaKnown RBP5.25□□□□□ -1.57
BRCA1-224ENST00000497488 P04436 131 aa5.25□□□□□ -1.57
BRCA1-224ENST00000497488 HBQ1P09105 142 aa5.25□□□□□ -1.57
BRCA1-224ENST00000497488 CDH1P12830 882 aa5.25□□□□□ -1.57
BRCA1-224ENST00000497488 GNA11P29992 359 aa5.25□□□□□ -1.57
BRCA1-224ENST00000497488 PRDX3P30048 256 aaKnown RBP5.25□□□□□ -1.57
BRCA1-224ENST00000497488 HOXD3P31249 432 aaPredicted RBP5.25□□□□□ -1.57
BRCA1-224ENST00000497488 MMP12P39900 470 aa5.25□□□□□ -1.57
BRCA1-224ENST00000497488 OR3A2P47893 321 aa5.25□□□□□ -1.57
BRCA1-224ENST00000497488 HLCSP50747 726 aa5.25□□□□□ -1.57
BRCA1-224ENST00000497488 FUT6P51993 359 aa5.25□□□□□ -1.57
BRCA1-224ENST00000497488 PSMC5P62195 406 aa5.25□□□□□ -1.57
BRCA1-224ENST00000497488 KCNJ2P63252 427 aa5.25□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms