RNA–Protein interactions for RNA: ENST00000497327.1

GGPS1-208, Transcript of geranylgeranyl diphosphate synthase 1, humanhuman

TSL 3

Gene GGPS1, Length 868 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGPS1-208ENST00000497327 SLC13A2Q13183 592 aa4.91□□□□□ -1.62
GGPS1-208ENST00000497327 EXOSC7Q15024 291 aaKnown RBP4.91□□□□□ -1.62
GGPS1-208ENST00000497327 TRIP10Q15642 601 aa4.91□□□□□ -1.62
GGPS1-208ENST00000497327 DUSP5Q16690 384 aa4.91□□□□□ -1.62
GGPS1-208ENST00000497327 ISXQ2M1V0 245 aa4.91□□□□□ -1.62
GGPS1-208ENST00000497327 LRRC23Q53EV4 343 aaPredicted RBP4.91□□□□□ -1.62
GGPS1-208ENST00000497327 VWA2Q5GFL6 755 aa4.91□□□□□ -1.62
GGPS1-208ENST00000497327 LCN10Q6JVE6 187 aa4.91□□□□□ -1.62
GGPS1-208ENST00000497327 ANGPTL8Q6UXH0 198 aa4.91□□□□□ -1.62
GGPS1-208ENST00000497327 RBM44Q6ZP01 1051 aaKnown RBP4.91□□□□□ -1.62
GGPS1-208ENST00000497327 OLIG3Q7RTU3 272 aa4.91□□□□□ -1.62
GGPS1-208ENST00000497327 PIWIL3Q7Z3Z3 882 aaKnown RBP4.91□□□□□ -1.62
GGPS1-208ENST00000497327 VTCN1Q7Z7D3 282 aa4.91□□□□□ -1.62
GGPS1-208ENST00000497327 PATL1Q86TB9 770 aaKnown RBP4.91□□□□□ -1.62
GGPS1-208ENST00000497327 EPHX4Q8IUS5 362 aa4.91□□□□□ -1.62
GGPS1-208ENST00000497327 IZUMO1Q8IYV9 350 aa4.91□□□□□ -1.62
GGPS1-208ENST00000497327 ZNF615Q8N8J6 731 aa4.91□□□□□ -1.62
GGPS1-208ENST00000497327 CDRT4Q8N9R6 151 aa4.91□□□□□ -1.62
GGPS1-208ENST00000497327 C7orf57Q8NEG2 295 aa4.91□□□□□ -1.62
GGPS1-208ENST00000497327 GPR32P1Q8NGA4 272 aa4.91□□□□□ -1.62
GGPS1-208ENST00000497327 OR52R1Q8NGF1 315 aa4.91□□□□□ -1.62
GGPS1-208ENST00000497327 OR10Q1Q8NGQ4 319 aa4.91□□□□□ -1.62
GGPS1-208ENST00000497327 PRSS3P2Q8NHM4 247 aa4.91□□□□□ -1.62
GGPS1-208ENST00000497327 C16orf52Q8NHV5 167 aa4.91□□□□□ -1.62
GGPS1-208ENST00000497327 BBS10Q8TAM1 723 aa4.91□□□□□ -1.62
GGPS1-208ENST00000497327 PPP1R35Q8TAP8 253 aa4.91□□□□□ -1.62
GGPS1-208ENST00000497327 RIT1Q92963 219 aa4.91□□□□□ -1.62
GGPS1-208ENST00000497327 TSLPQ969D9 159 aa4.91□□□□□ -1.62
GGPS1-208ENST00000497327 NCLNQ969V3 563 aa4.91□□□□□ -1.62
GGPS1-208ENST00000497327 SLC47A1Q96FL8 570 aa4.91□□□□□ -1.62
GGPS1-208ENST00000497327 OTUB1Q96FW1 271 aaPredicted RBP4.91□□□□□ -1.62
GGPS1-208ENST00000497327 CENPNQ96H22 339 aaPredicted RBP4.91□□□□□ -1.62
GGPS1-208ENST00000497327 RBM18Q96H35 190 aaKnown RBP4.91□□□□□ -1.62
GGPS1-208ENST00000497327 MAGED4Q96JG8 741 aa4.91□□□□□ -1.62
GGPS1-208ENST00000497327 VSTM2LQ96N03 204 aa4.91□□□□□ -1.62
GGPS1-208ENST00000497327 ZNF578Q96N58 590 aaPredicted RBP4.91□□□□□ -1.62
GGPS1-208ENST00000497327 TRNT1Q96Q11 434 aaKnown RBP4.91□□□□□ -1.62
GGPS1-208ENST00000497327 STACQ99469 402 aa4.91□□□□□ -1.62
GGPS1-208ENST00000497327 SEPHS2Q99611 448 aa4.91□□□□□ -1.62
GGPS1-208ENST00000497327 SLC29A1Q99808 456 aa4.91□□□□□ -1.62
GGPS1-208ENST00000497327 TREX2Q9BQ50 279 aaPredicted RBP4.91□□□□□ -1.62
GGPS1-208ENST00000497327 PELOQ9BRX2 385 aaKnown RBP4.91□□□□□ -1.62
GGPS1-208ENST00000497327 LMF2Q9BU23 707 aaKnown RBP4.91□□□□□ -1.62
GGPS1-208ENST00000497327 DOHHQ9BU89 302 aa4.91□□□□□ -1.62
GGPS1-208ENST00000497327 VN1R1Q9GZP7 353 aa4.91□□□□□ -1.62
GGPS1-208ENST00000497327 SLC38A1Q9H2H9 487 aa4.91□□□□□ -1.62
GGPS1-208ENST00000497327 PIGUQ9H490 435 aa4.91□□□□□ -1.62
GGPS1-208ENST00000497327 SYNDIG1Q9H7V2 258 aa4.91□□□□□ -1.62
GGPS1-208ENST00000497327 AKIRIN1Q9H9L7 192 aaPredicted RBP4.91□□□□□ -1.62
GGPS1-208ENST00000497327 IL1RAPQ9NPH3 570 aa4.91□□□□□ -1.62
GGPS1-208ENST00000497327 P2RX2Q9UBL9 471 aa4.91□□□□□ -1.62
GGPS1-208ENST00000497327 CTSFQ9UBX1 484 aa4.91□□□□□ -1.62
GGPS1-208ENST00000497327 RPS6KA6Q9UK32 745 aa4.91□□□□□ -1.62
GGPS1-208ENST00000497327 LIPT1Q9Y234 373 aa4.91□□□□□ -1.62
GGPS1-208ENST00000497327 ANGPT4Q9Y264 503 aa4.91□□□□□ -1.62
GGPS1-208ENST00000497327 COL27A1Q8IZC6 1860 aaPredicted RBP4.91□□□□□ -1.62
GGPS1-208ENST00000497327 CUL9Q8IWT3 2517 aa4.91□□□□□ -1.62
GGPS1-208ENST00000497327 A0A0G2JPF8 293 aa4.9□□□□□ -1.63
GGPS1-208ENST00000497327 TTC36A6NLP5 189 aa4.9□□□□□ -1.63
GGPS1-208ENST00000497327 A8MVJ9 347 aa4.9□□□□□ -1.63
GGPS1-208ENST00000497327 C17orf105B2RV13 164 aa4.9□□□□□ -1.63
GGPS1-208ENST00000497327 HNRNPCL2B2RXH8 293 aa4.9□□□□□ -1.63
GGPS1-208ENST00000497327 HNRNPCL3B7ZW38 293 aa4.9□□□□□ -1.63
GGPS1-208ENST00000497327 H0YJX3 145 aa4.9□□□□□ -1.63
GGPS1-208ENST00000497327 TMX2-CTNND1H3BSU7 103 aa4.9□□□□□ -1.63
GGPS1-208ENST00000497327 AP4M1O00189 453 aa4.9□□□□□ -1.63
GGPS1-208ENST00000497327 DLGAP1O14490 977 aa4.9□□□□□ -1.63
GGPS1-208ENST00000497327 ADAM10O14672 748 aa4.9□□□□□ -1.63
GGPS1-208ENST00000497327 POLR1CO15160 346 aaPredicted RBP4.9□□□□□ -1.63
GGPS1-208ENST00000497327 SLC28A2O43868 658 aa4.9□□□□□ -1.63
GGPS1-208ENST00000497327 OR10H2O60403 315 aa4.9□□□□□ -1.63
GGPS1-208ENST00000497327 TPST1O60507 370 aa4.9□□□□□ -1.63
GGPS1-208ENST00000497327 FCMRO60667 390 aa4.9□□□□□ -1.63
GGPS1-208ENST00000497327 COQ9O75208 318 aa4.9□□□□□ -1.63
GGPS1-208ENST00000497327 PDE9AO76083 593 aa4.9□□□□□ -1.63
GGPS1-208ENST00000497327 SOX30O94993 753 aa4.9□□□□□ -1.63
GGPS1-208ENST00000497327 ZNF682O95780 498 aa4.9□□□□□ -1.63
GGPS1-208ENST00000497327 DDAH2O95865 285 aa4.9□□□□□ -1.63
GGPS1-208ENST00000497327 AGR2O95994 175 aa4.9□□□□□ -1.63
GGPS1-208ENST00000497327 MT-CO3P00414 261 aa4.9□□□□□ -1.63
GGPS1-208ENST00000497327 LDLRP01130 860 aa4.9□□□□□ -1.63
GGPS1-208ENST00000497327 IFNA14P01570 189 aa4.9□□□□□ -1.63
GGPS1-208ENST00000497327 OPN1SWP03999 348 aa4.9□□□□□ -1.63
GGPS1-208ENST00000497327 BCHEP06276 602 aa4.9□□□□□ -1.63
GGPS1-208ENST00000497327 CYC1P08574 325 aa4.9□□□□□ -1.63
GGPS1-208ENST00000497327 ALOX5P09917 674 aa4.9□□□□□ -1.63
GGPS1-208ENST00000497327 HNRNPCL4P0DMR1 293 aa4.9□□□□□ -1.63
GGPS1-208ENST00000497327 NR2F1P10589 423 aa4.9□□□□□ -1.63
GGPS1-208ENST00000497327 ETV5P41161 510 aa4.9□□□□□ -1.63
GGPS1-208ENST00000497327 CRISP3P54108 245 aa4.9□□□□□ -1.63
GGPS1-208ENST00000497327 CLDN6P56747 220 aa4.9□□□□□ -1.63
GGPS1-208ENST00000497327 FOXL2P58012 376 aa4.9□□□□□ -1.63
GGPS1-208ENST00000497327 DCDP81605 110 aaKnown RBP4.9□□□□□ -1.63
GGPS1-208ENST00000497327 STX4Q12846 297 aa4.9□□□□□ -1.63
GGPS1-208ENST00000497327 DUSP7Q16829 419 aa4.9□□□□□ -1.63
GGPS1-208ENST00000497327 ARHGAP11BQ3KRB8 267 aa4.9□□□□□ -1.63
GGPS1-208ENST00000497327 KLHL22Q53GT1 634 aa4.9□□□□□ -1.63
GGPS1-208ENST00000497327 SFT2D3Q587I9 215 aa4.9□□□□□ -1.63
GGPS1-208ENST00000497327 CMPK2Q5EBM0 449 aa4.9□□□□□ -1.63
GGPS1-208ENST00000497327 WLSQ5T9L3 541 aa4.9□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms