RNA–Protein interactions for RNA: ENST00000496347.1

HDAC4-213, Transcript of histone deacetylase 4, humanhuman

TSL 3

Gene HDAC4, Length 995 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-213ENST00000496347 OR5B2Q96R09 309 aa14.01□□□□□ -0.17
HDAC4-213ENST00000496347 OR52B2Q96RD2 323 aa14.01□□□□□ -0.17
HDAC4-213ENST00000496347 CCDC106Q9BWC9 280 aa14.01□□□□□ -0.17
HDAC4-213ENST00000496347 QRSL1Q9H0R6 528 aaKnown RBP14.01□□□□□ -0.17
HDAC4-213ENST00000496347 THUMPD1Q9NXG2 353 aaKnown RBP14.01□□□□□ -0.17
HDAC4-213ENST00000496347 CHRNA9Q9UGM1 479 aa14.01□□□□□ -0.17
HDAC4-213ENST00000496347 DSPPQ9NZW4 1301 aa14□□□□□ -0.17
HDAC4-213ENST00000496347 A0A1W2PNR3 127 aa14□□□□□ -0.17
HDAC4-213ENST00000496347 FAM234BA2RU67 622 aa14□□□□□ -0.17
HDAC4-213ENST00000496347 FAAHO00519 579 aa14□□□□□ -0.17
HDAC4-213ENST00000496347 POLR3GO15318 223 aaPredicted RBP14□□□□□ -0.17
HDAC4-213ENST00000496347 DNPH1O43598 174 aa14□□□□□ -0.17
HDAC4-213ENST00000496347 BCAS1O75363 584 aaPredicted RBP14□□□□□ -0.17
HDAC4-213ENST00000496347 GSNP06396 782 aa14□□□□□ -0.17
HDAC4-213ENST00000496347 NR2F1P10589 423 aa14□□□□□ -0.17
HDAC4-213ENST00000496347 UQCRBP14927 111 aa14□□□□□ -0.17
HDAC4-213ENST00000496347 ENPP1P22413 925 aa14□□□□□ -0.17
HDAC4-213ENST00000496347 HTR3AP46098 478 aa14□□□□□ -0.17
HDAC4-213ENST00000496347 POLR2JP52435 117 aaKnown RBP14□□□□□ -0.17
HDAC4-213ENST00000496347 STX1BP61266 288 aa14□□□□□ -0.17
HDAC4-213ENST00000496347 SYPL1Q16563 259 aa14□□□□□ -0.17
HDAC4-213ENST00000496347 COX20Q5RI15 118 aa14□□□□□ -0.17
HDAC4-213ENST00000496347 ABLIM2Q6H8Q1 611 aa14□□□□□ -0.17
HDAC4-213ENST00000496347 EPGNQ6UW88 154 aa14□□□□□ -0.17
HDAC4-213ENST00000496347 ZNF563Q8TA94 476 aa14□□□□□ -0.17
HDAC4-213ENST00000496347 PNPT1Q8TCS8 783 aaKnown RBP14□□□□□ -0.17
HDAC4-213ENST00000496347 WDR60Q8WVS4 1066 aa14□□□□□ -0.17
HDAC4-213ENST00000496347 ACTR6Q9GZN1 396 aa14□□□□□ -0.17
HDAC4-213ENST00000496347 C12orf49Q9H741 205 aa14□□□□□ -0.17
HDAC4-213ENST00000496347 TCF7L2Q9NQB0 619 aa14□□□□□ -0.17
HDAC4-213ENST00000496347 BEX4Q9NWD9 120 aaPredicted RBP14□□□□□ -0.17
HDAC4-213ENST00000496347 CALML5Q9NZT1 146 aa14□□□□□ -0.17
HDAC4-213ENST00000496347 GPR52Q9Y2T5 361 aa14□□□□□ -0.17
HDAC4-213ENST00000496347 DSCAMO60469 2012 aa14□□□□□ -0.17
HDAC4-213ENST00000496347 SMAD9O15198 467 aaKnown RBP13.99□□□□□ -0.17
HDAC4-213ENST00000496347 CYTIPO60759 359 aa13.99□□□□□ -0.17
HDAC4-213ENST00000496347 ANP32DO95626 131 aa13.99□□□□□ -0.17
HDAC4-213ENST00000496347 C1QCP02747 245 aa13.99□□□□□ -0.17
HDAC4-213ENST00000496347 DBIP07108 87 aaKnown RBP13.99□□□□□ -0.17
HDAC4-213ENST00000496347 FESP07332 822 aa13.99□□□□□ -0.17
HDAC4-213ENST00000496347 YES1P07947 543 aa13.99□□□□□ -0.17
HDAC4-213ENST00000496347 CLK1P49759 484 aaKnown RBP13.99□□□□□ -0.17
HDAC4-213ENST00000496347 DIO1P49895 249 aa13.99□□□□□ -0.17
HDAC4-213ENST00000496347 MVDP53602 400 aa13.99□□□□□ -0.17
HDAC4-213ENST00000496347 CRISP3P54108 245 aa13.99□□□□□ -0.17
HDAC4-213ENST00000496347 NR1H2P55055 460 aa13.99□□□□□ -0.17
HDAC4-213ENST00000496347 RIPPLY3P57055 190 aa13.99□□□□□ -0.17
HDAC4-213ENST00000496347 PPP2R2AP63151 447 aa13.99□□□□□ -0.17
HDAC4-213ENST00000496347 BEX5Q5H9J7 111 aa13.99□□□□□ -0.17
HDAC4-213ENST00000496347 C6orf10Q5SRN2 563 aa13.99□□□□□ -0.17
HDAC4-213ENST00000496347 C20orf204Q6ZNR8 217 aa13.99□□□□□ -0.17
HDAC4-213ENST00000496347 TGIF2LYQ8IUE0 185 aa13.99□□□□□ -0.17
HDAC4-213ENST00000496347 TUSC5Q8IXB3 177 aa13.99□□□□□ -0.17
HDAC4-213ENST00000496347 PEX5LQ8IYB4 626 aa13.99□□□□□ -0.17
HDAC4-213ENST00000496347 GABRG1Q8N1C3 465 aa13.99□□□□□ -0.17
HDAC4-213ENST00000496347 STEAP2Q8NFT2 490 aa13.99□□□□□ -0.17
HDAC4-213ENST00000496347 OR9I1Q8NGQ6 314 aa13.99□□□□□ -0.17
HDAC4-213ENST00000496347 ZG16BQ96DA0 208 aa13.99□□□□□ -0.17
HDAC4-213ENST00000496347 ZHX1-C8orf76Q96EF9 292 aa13.99□□□□□ -0.17
HDAC4-213ENST00000496347 PIK3IP1Q96FE7 263 aa13.99□□□□□ -0.17
HDAC4-213ENST00000496347 ZC3HAV1LQ96H79 300 aaKnown RBP13.99□□□□□ -0.17
HDAC4-213ENST00000496347 PSD2Q9BQI7 771 aa13.99□□□□□ -0.17
HDAC4-213ENST00000496347 HDHD5Q9BXW7 423 aa13.99□□□□□ -0.17
HDAC4-213ENST00000496347 MTHFD2LQ9H903 347 aaPredicted RBP13.99□□□□□ -0.17
HDAC4-213ENST00000496347 TPT1P8Q9HAU6 139 aa13.99□□□□□ -0.17
HDAC4-213ENST00000496347 SLC6A13Q9NSD5 602 aa13.99□□□□□ -0.17
HDAC4-213ENST00000496347 EMC3Q9P0I2 261 aa13.99□□□□□ -0.17
HDAC4-213ENST00000496347 HDGFL3Q9Y3E1 203 aa13.99□□□□□ -0.17
HDAC4-213ENST00000496347 CLDN24A6NM45 220 aa13.98□□□□□ -0.17
HDAC4-213ENST00000496347 ZNF724A8MTY0 619 aa13.98□□□□□ -0.17
HDAC4-213ENST00000496347 HMGB1P1B2RPK0 211 aaPredicted RBP13.98□□□□□ -0.17
HDAC4-213ENST00000496347 GCM2O75603 506 aaPredicted RBP13.98□□□□□ -0.17
HDAC4-213ENST00000496347 CNOT4O95628 575 aaKnown RBP13.98□□□□□ -0.17
HDAC4-213ENST00000496347 PMS2P2O95744 297 aa13.98□□□□□ -0.17
HDAC4-213ENST00000496347 IL7RP16871 459 aa13.98□□□□□ -0.17
HDAC4-213ENST00000496347 CD53P19397 219 aa13.98□□□□□ -0.17
HDAC4-213ENST00000496347 RYKP34925 604 aa13.98□□□□□ -0.17
HDAC4-213ENST00000496347 MAP2K6P52564 334 aa13.98□□□□□ -0.17
HDAC4-213ENST00000496347 IRX1P78414 480 aaPredicted RBP13.98□□□□□ -0.17
HDAC4-213ENST00000496347 P2RY6Q15077 328 aa13.98□□□□□ -0.17
HDAC4-213ENST00000496347 ZSWIM7Q19AV6 140 aa13.98□□□□□ -0.17
HDAC4-213ENST00000496347 LIN52Q52LA3 116 aa13.98□□□□□ -0.17
HDAC4-213ENST00000496347 TTMPQ5BVD1 217 aa13.98□□□□□ -0.17
HDAC4-213ENST00000496347 MRPL2Q5T653 305 aaKnown RBP13.98□□□□□ -0.17
HDAC4-213ENST00000496347 TMPPEQ6ZT21 453 aa13.98□□□□□ -0.17
HDAC4-213ENST00000496347 HMGN2P46Q86SG4 172 aa13.98□□□□□ -0.17
HDAC4-213ENST00000496347 ZNF440Q8IYI8 595 aa13.98□□□□□ -0.17
HDAC4-213ENST00000496347 GOLGA6L1Q8N7Z2 621 aa13.98□□□□□ -0.17
HDAC4-213ENST00000496347 USB1Q9BQ65 265 aaKnown RBP13.98□□□□□ -0.17
HDAC4-213ENST00000496347 CTPS2Q9NRF8 586 aa13.98□□□□□ -0.17
HDAC4-213ENST00000496347 ARGLU1Q9NWB6 273 aaPredicted RBP13.98□□□□□ -0.17
HDAC4-213ENST00000496347 ING1Q9UK53 422 aaPredicted RBP13.98□□□□□ -0.17
HDAC4-213ENST00000496347 PRDM4Q9UKN5 801 aa13.98□□□□□ -0.17
HDAC4-213ENST00000496347 NSD1Q96L73 2696 aaPredicted RBP13.98□□□□□ -0.17
HDAC4-213ENST00000496347 IGKV3D-15A0A087WSY6 115 aa13.97□□□□□ -0.17
HDAC4-213ENST00000496347 IGHV3-15A0A0B4J1V0 119 aa13.97□□□□□ -0.17
HDAC4-213ENST00000496347 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP13.97□□□□□ -0.17
HDAC4-213ENST00000496347 TMEM247A6NEH6 219 aa13.97□□□□□ -0.17
HDAC4-213ENST00000496347 CFAP73A6NFT4 308 aa13.97□□□□□ -0.17
HDAC4-213ENST00000496347 SULT2B1O00204 365 aa13.97□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms