RNA–Protein interactions for RNA: ENST00000495756.5

ATG3-208, Transcript of autophagy related 3, humanhuman

TSL 1 (best)

Gene ATG3, Length 1,455 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG3-208ENST00000495756 ALG10BQ5I7T1 473 aa17.63■□□□□ 0.41
ATG3-208ENST00000495756 SWT1Q5T5J6 900 aaKnown RBP17.63■□□□□ 0.41
ATG3-208ENST00000495756 GDF7Q7Z4P5 450 aa17.63■□□□□ 0.41
ATG3-208ENST00000495756 ZNF605Q86T29 641 aa17.63■□□□□ 0.41
ATG3-208ENST00000495756 ATG4DQ86TL0 474 aaPredicted RBP17.63■□□□□ 0.41
ATG3-208ENST00000495756 OFCC1Q8IZS5 231 aa17.63■□□□□ 0.41
ATG3-208ENST00000495756 STMN2Q93045 179 aa17.63■□□□□ 0.41
ATG3-208ENST00000495756 PIGQQ9BRB3 760 aa17.63■□□□□ 0.41
ATG3-208ENST00000495756 FNDC11Q9BVV2 318 aa17.63■□□□□ 0.41
ATG3-208ENST00000495756 TSPAN10Q9H1Z9 355 aaPredicted RBP17.63■□□□□ 0.41
ATG3-208ENST00000495756 NMNAT1Q9HAN9 279 aaPredicted RBP17.63■□□□□ 0.41
ATG3-208ENST00000495756 SELENONQ9NZV5 590 aa17.63■□□□□ 0.41
ATG3-208ENST00000495756 RHCGQ9UBD6 479 aa17.63■□□□□ 0.41
ATG3-208ENST00000495756 OSGIN1Q9UJX0 560 aa17.63■□□□□ 0.41
ATG3-208ENST00000495756 OR2M5A3KFT3 312 aa17.62■□□□□ 0.41
ATG3-208ENST00000495756 H3BNX3 289 aa17.62■□□□□ 0.41
ATG3-208ENST00000495756 ATXN7O15265 892 aaPredicted RBP17.62■□□□□ 0.41
ATG3-208ENST00000495756 CHP2O43745 196 aa17.62■□□□□ 0.41
ATG3-208ENST00000495756 TIPRLO75663 272 aa17.62■□□□□ 0.41
ATG3-208ENST00000495756 LYPD3O95274 346 aa17.62■□□□□ 0.41
ATG3-208ENST00000495756 THRBP10828 461 aa17.62■□□□□ 0.41
ATG3-208ENST00000495756 FUT4P22083 530 aa17.62■□□□□ 0.41
ATG3-208ENST00000495756 APOBEC1P41238 236 aaKnown RBP17.62■□□□□ 0.41
ATG3-208ENST00000495756 ST3GAL3Q11203 375 aa17.62■□□□□ 0.41
ATG3-208ENST00000495756 CISD2Q8N5K1 135 aaKnown RBP17.62■□□□□ 0.41
ATG3-208ENST00000495756 PIK3C3Q8NEB9 887 aa17.62■□□□□ 0.41
ATG3-208ENST00000495756 SLC38A4Q969I6 547 aa17.62■□□□□ 0.41
ATG3-208ENST00000495756 SLC6A15Q9H2J7 730 aa17.62■□□□□ 0.41
ATG3-208ENST00000495756 C12orf10Q9HB07 376 aa17.62■□□□□ 0.41
ATG3-208ENST00000495756 S100A14Q9HCY8 104 aa17.62■□□□□ 0.41
ATG3-208ENST00000495756 MAN2C1Q9NTJ4 1040 aa17.62■□□□□ 0.41
ATG3-208ENST00000495756 SLC7A7Q9UM01 511 aa17.62■□□□□ 0.41
ATG3-208ENST00000495756 TESMINQ9Y4I5 508 aa17.62■□□□□ 0.41
ATG3-208ENST00000495756 ZNF407Q9C0G0 2248 aa17.61■□□□□ 0.41
ATG3-208ENST00000495756 MED12Q93074 2177 aa17.61■□□□□ 0.41
ATG3-208ENST00000495756 TMED7-TICAM2A0A0A6YYA0 188 aa17.61■□□□□ 0.41
ATG3-208ENST00000495756 NPIPA5E9PKD4 350 aa17.61■□□□□ 0.41
ATG3-208ENST00000495756 HNRNPRO43390 633 aaKnown RBP17.61■□□□□ 0.41
ATG3-208ENST00000495756 CST1P01037 141 aa17.61■□□□□ 0.41
ATG3-208ENST00000495756 H1F0P07305 194 aaKnown RBP17.61■□□□□ 0.41
ATG3-208ENST00000495756 PNMTP11086 282 aa17.61■□□□□ 0.41
ATG3-208ENST00000495756 OR2T5Q6IEZ7 315 aa17.61■□□□□ 0.41
ATG3-208ENST00000495756 POMZP3Q6PJE2 187 aa17.61■□□□□ 0.41
ATG3-208ENST00000495756 ADGRG3Q86Y34 549 aa17.61■□□□□ 0.41
ATG3-208ENST00000495756 OR2T29Q8NH02 315 aa17.61■□□□□ 0.41
ATG3-208ENST00000495756 RNF217Q8TC41 542 aa17.61■□□□□ 0.41
ATG3-208ENST00000495756 DHRS1Q96LJ7 313 aa17.61■□□□□ 0.41
ATG3-208ENST00000495756 SFXN2Q96NB2 322 aa17.61■□□□□ 0.41
ATG3-208ENST00000495756 NPIPA1Q9UND3 350 aa17.61■□□□□ 0.41
ATG3-208ENST00000495756 TMED7Q9Y3B3 224 aa17.61■□□□□ 0.41
ATG3-208ENST00000495756 LIPGQ9Y5X9 500 aa17.61■□□□□ 0.41
ATG3-208ENST00000495756 SMG1Q96Q15 3661 aaKnown RBP17.6■□□□□ 0.41
ATG3-208ENST00000495756 ELOA3DA6NLF2 546 aaPredicted RBP17.6■□□□□ 0.41
ATG3-208ENST00000495756 H0YHG0 523 aa17.6■□□□□ 0.41
ATG3-208ENST00000495756 EFNA2O43921 213 aa17.6■□□□□ 0.41
ATG3-208ENST00000495756 KRT36O76013 467 aa17.6■□□□□ 0.41
ATG3-208ENST00000495756 IGHG3P01860 377 aa17.6■□□□□ 0.41
ATG3-208ENST00000495756 FCGR1AP12314 374 aa17.6■□□□□ 0.41
ATG3-208ENST00000495756 IL11P20809 199 aa17.6■□□□□ 0.41
ATG3-208ENST00000495756 CXCR1P25024 350 aa17.6■□□□□ 0.41
ATG3-208ENST00000495756 ELK4P28324 431 aa17.6■□□□□ 0.41
ATG3-208ENST00000495756 RRM2P31350 389 aa17.6■□□□□ 0.41
ATG3-208ENST00000495756 GFRA1P56159 465 aa17.6■□□□□ 0.41
ATG3-208ENST00000495756 SPIBQ01892 262 aa17.6■□□□□ 0.41
ATG3-208ENST00000495756 TRAM2Q15035 370 aa17.6■□□□□ 0.41
ATG3-208ENST00000495756 ELOA3BQ3SY89 546 aa17.6■□□□□ 0.41
ATG3-208ENST00000495756 ZNF324BQ6AW86 544 aaPredicted RBP17.6■□□□□ 0.41
ATG3-208ENST00000495756 AAGABQ6PD74 315 aa17.6■□□□□ 0.41
ATG3-208ENST00000495756 LINC00114Q6XXX2 140 aa17.6■□□□□ 0.41
ATG3-208ENST00000495756 LSM14AQ8ND56 463 aaKnown RBP17.6■□□□□ 0.41
ATG3-208ENST00000495756 ELOA3Q8NG57 546 aa17.6■□□□□ 0.41
ATG3-208ENST00000495756 SNRNP40Q96DI7 357 aaKnown RBP17.6■□□□□ 0.41
ATG3-208ENST00000495756 MPP4Q96JB8 637 aa17.6■□□□□ 0.41
ATG3-208ENST00000495756 PRSS27Q9BQR3 290 aa17.6■□□□□ 0.41
ATG3-208ENST00000495756 LDAHQ9H6V9 325 aa17.6■□□□□ 0.41
ATG3-208ENST00000495756 DNAJB9Q9UBS3 223 aa17.6■□□□□ 0.41
ATG3-208ENST00000495756 CHRNA9Q9UGM1 479 aa17.6■□□□□ 0.41
ATG3-208ENST00000495756 SLC6A5Q9Y345 797 aa17.6■□□□□ 0.41
ATG3-208ENST00000495756 RRP15Q9Y3B9 282 aaKnown RBP17.6■□□□□ 0.41
ATG3-208ENST00000495756 A0A087WUJ7 227 aa17.59■□□□□ 0.41
ATG3-208ENST00000495756 TRGV5A0A0B4J1U4 118 aa17.59■□□□□ 0.41
ATG3-208ENST00000495756 A0A1W2PRQ8 180 aa17.59■□□□□ 0.41
ATG3-208ENST00000495756 LINC01387J3KSC0 135 aa17.59■□□□□ 0.41
ATG3-208ENST00000495756 ADAMDEC1O15204 470 aa17.59■□□□□ 0.41
ATG3-208ENST00000495756 CLOCKO15516 846 aa17.59■□□□□ 0.41
ATG3-208ENST00000495756 WISP2O76076 250 aa17.59■□□□□ 0.41
ATG3-208ENST00000495756 CHMP24386 653 aa17.59■□□□□ 0.41
ATG3-208ENST00000495756 FASP25445 335 aa17.59■□□□□ 0.41
ATG3-208ENST00000495756 SMIM11AP58511 58 aa17.59■□□□□ 0.41
ATG3-208ENST00000495756 FOXD4Q12950 439 aaPredicted RBP17.59■□□□□ 0.41
ATG3-208ENST00000495756 DGCR6Q14129 220 aa17.59■□□□□ 0.41
ATG3-208ENST00000495756 WDR88Q6ZMY6 472 aa17.59■□□□□ 0.41
ATG3-208ENST00000495756 TRILQ7L0X0 811 aa17.59■□□□□ 0.41
ATG3-208ENST00000495756 LSRQ86X29 649 aaPredicted RBP17.59■□□□□ 0.41
ATG3-208ENST00000495756 NKAIN4Q8IVV8 208 aa17.59■□□□□ 0.41
ATG3-208ENST00000495756 NEIL3Q8TAT5 605 aa17.59■□□□□ 0.41
ATG3-208ENST00000495756 FAR1Q8WVX9 515 aa17.59■□□□□ 0.41
ATG3-208ENST00000495756 ANKRD19PQ9H560 264 aa17.59■□□□□ 0.41
ATG3-208ENST00000495756 SERINC1Q9NRX5 453 aa17.59■□□□□ 0.41
ATG3-208ENST00000495756 PLSCR2Q9NRY7 297 aa17.59■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms