RNA–Protein interactions for RNA: ENST00000494780.1

COL27A1-208, Transcript of collagen type XXVII alpha 1 chain, humanhuman

TSL 4

Gene COL27A1, Length 514 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-208ENST00000494780 MAPK1IP1LQ8NDC0 245 aa20.54■□□□□ 0.88
COL27A1-208ENST00000494780 OR8J2Q8NGG1 315 aa20.54■□□□□ 0.88
COL27A1-208ENST00000494780 TRAF4Q9BUZ4 470 aaPredicted RBP20.54■□□□□ 0.88
COL27A1-208ENST00000494780 ALG2Q9H553 416 aa20.54■□□□□ 0.88
COL27A1-208ENST00000494780 POLE3Q9NRF9 147 aa20.54■□□□□ 0.88
COL27A1-208ENST00000494780 FAIMQ9NVQ4 179 aa20.54■□□□□ 0.88
COL27A1-208ENST00000494780 EMC3Q9P0I2 261 aa20.54■□□□□ 0.88
COL27A1-208ENST00000494780 PCDHGB4Q9UN71 923 aa20.54■□□□□ 0.88
COL27A1-208ENST00000494780 SPIN1Q9Y657 262 aaPredicted RBP20.54■□□□□ 0.88
COL27A1-208ENST00000494780 CADP27708 2225 aa20.54■□□□□ 0.88
COL27A1-208ENST00000494780 IGKV3D-15A0A087WSY6 115 aa20.53■□□□□ 0.88
COL27A1-208ENST00000494780 SHISA9B4DS77 424 aa20.53■□□□□ 0.88
COL27A1-208ENST00000494780 KIAA0513O60268 411 aa20.53■□□□□ 0.88
COL27A1-208ENST00000494780 IGHV4-39P01824 125 aa20.53■□□□□ 0.88
COL27A1-208ENST00000494780 ACVR1BP36896 505 aa20.53■□□□□ 0.88
COL27A1-208ENST00000494780 APOBEC1P41238 236 aaKnown RBP20.53■□□□□ 0.88
COL27A1-208ENST00000494780 ABLIM2Q6H8Q1 611 aa20.53■□□□□ 0.88
COL27A1-208ENST00000494780 OLIG3Q7RTU3 272 aa20.53■□□□□ 0.88
COL27A1-208ENST00000494780 ZC3HAV1Q7Z2W4 902 aaKnown RBP20.53■□□□□ 0.88
COL27A1-208ENST00000494780 MTDHQ86UE4 582 aaKnown RBP20.53■□□□□ 0.88
COL27A1-208ENST00000494780 DTX2Q86UW9 622 aa20.53■□□□□ 0.88
COL27A1-208ENST00000494780 OR4A15Q8NGL6 344 aa20.53■□□□□ 0.88
COL27A1-208ENST00000494780 OR51I1Q9H343 314 aa20.53■□□□□ 0.88
COL27A1-208ENST00000494780 BARX1Q9HBU1 254 aaPredicted RBP20.53■□□□□ 0.88
COL27A1-208ENST00000494780 SLC35A3Q9Y2D2 325 aa20.53■□□□□ 0.88
COL27A1-208ENST00000494780 GOLGA8QA0A0J9YX86 632 aa20.52■□□□□ 0.88
COL27A1-208ENST00000494780 GOLGA8OA6NCC3 632 aa20.52■□□□□ 0.88
COL27A1-208ENST00000494780 GOLGA8NF8WBI6 632 aa20.52■□□□□ 0.88
COL27A1-208ENST00000494780 TYROBPO43914 113 aa20.52■□□□□ 0.88
COL27A1-208ENST00000494780 RAMP1O60894 148 aa20.52■□□□□ 0.88
COL27A1-208ENST00000494780 CD8AP01732 235 aa20.52■□□□□ 0.88
COL27A1-208ENST00000494780 CREB1P16220 341 aa20.52■□□□□ 0.88
COL27A1-208ENST00000494780 PGM1P36871 562 aa20.52■□□□□ 0.88
COL27A1-208ENST00000494780 ETV4P43268 484 aa20.52■□□□□ 0.88
COL27A1-208ENST00000494780 MAPK14Q16539 360 aa20.52■□□□□ 0.88
COL27A1-208ENST00000494780 ATAD3BQ5T9A4 648 aa20.52■□□□□ 0.88
COL27A1-208ENST00000494780 AP1ARQ63HQ0 302 aa20.52■□□□□ 0.88
COL27A1-208ENST00000494780 DNM1P46Q6ZS02 220 aa20.52■□□□□ 0.88
COL27A1-208ENST00000494780 NUDCD3Q8IVD9 361 aa20.52■□□□□ 0.88
COL27A1-208ENST00000494780 ZNF433Q8N7K0 673 aaPredicted RBP20.52■□□□□ 0.88
COL27A1-208ENST00000494780 FAM71CQ8NEG0 241 aa20.52■□□□□ 0.88
COL27A1-208ENST00000494780 ZHX1-C8orf76Q96EF9 292 aa20.52■□□□□ 0.88
COL27A1-208ENST00000494780 RADILQ96JH8 1075 aa20.52■□□□□ 0.88
COL27A1-208ENST00000494780 NPAP1Q9NZP6 1156 aa20.52■□□□□ 0.88
COL27A1-208ENST00000494780 WDR45Q9Y484 360 aa20.52■□□□□ 0.88
COL27A1-208ENST00000494780 SONP18583 2426 aaKnown RBP20.51■□□□□ 0.87
COL27A1-208ENST00000494780 OR5H1A6NKK0 313 aa20.51■□□□□ 0.87
COL27A1-208ENST00000494780 ANKRD28O15084 1053 aa20.51■□□□□ 0.87
COL27A1-208ENST00000494780 TP53P04637 393 aaPredicted RBP20.51■□□□□ 0.87
COL27A1-208ENST00000494780 OR12D1P0DN82 309 aa20.51■□□□□ 0.87
COL27A1-208ENST00000494780 TFPIP10646 304 aa20.51■□□□□ 0.87
COL27A1-208ENST00000494780 UQCRC2P22695 453 aa20.51■□□□□ 0.87
COL27A1-208ENST00000494780 FKBP2P26885 142 aaKnown RBP20.51■□□□□ 0.87
COL27A1-208ENST00000494780 CDH11P55287 796 aa20.51■□□□□ 0.87
COL27A1-208ENST00000494780 FBXW9Q5XUX1 488 aa20.51■□□□□ 0.87
COL27A1-208ENST00000494780 TYW3Q6IPR3 259 aaKnown RBP20.51■□□□□ 0.87
COL27A1-208ENST00000494780 CXXC5Q7LFL8 322 aaKnown RBP20.51■□□□□ 0.87
COL27A1-208ENST00000494780 ZNF563Q8TA94 476 aa20.51■□□□□ 0.87
COL27A1-208ENST00000494780 XAGE5Q8WWM1 108 aa20.51■□□□□ 0.87
COL27A1-208ENST00000494780 HS6ST2Q96MM7 605 aa20.51■□□□□ 0.87
COL27A1-208ENST00000494780 CCDC106Q9BWC9 280 aa20.51■□□□□ 0.87
COL27A1-208ENST00000494780 SAP130Q9H0E3 1048 aa20.51■□□□□ 0.87
COL27A1-208ENST00000494780 AKTIPQ9H8T0 292 aa20.51■□□□□ 0.87
COL27A1-208ENST00000494780 CHRNA9Q9UGM1 479 aa20.51■□□□□ 0.87
COL27A1-208ENST00000494780 CHD3Q12873 2000 aaKnown RBP20.51■□□□□ 0.87
COL27A1-208ENST00000494780 PRSS51A0A1B0GVH4 220 aa20.5■□□□□ 0.87
COL27A1-208ENST00000494780 ZNF716A6NP11 495 aa20.5■□□□□ 0.87
COL27A1-208ENST00000494780 ABCD4O14678 606 aa20.5■□□□□ 0.87
COL27A1-208ENST00000494780 DNPH1O43598 174 aa20.5■□□□□ 0.87
COL27A1-208ENST00000494780 SCN2BO60939 215 aa20.5■□□□□ 0.87
COL27A1-208ENST00000494780 CLK1P49759 484 aaKnown RBP20.5■□□□□ 0.87
COL27A1-208ENST00000494780 PDCD2Q16342 344 aaPredicted RBP20.5■□□□□ 0.87
COL27A1-208ENST00000494780 NRF1Q16656 503 aa20.5■□□□□ 0.87
COL27A1-208ENST00000494780 ANXA8L1Q5VT79 327 aa20.5■□□□□ 0.87
COL27A1-208ENST00000494780 VPS37AQ8NEZ2 397 aa20.5■□□□□ 0.87
COL27A1-208ENST00000494780 SPATA3Q8NHX4 192 aa20.5■□□□□ 0.87
COL27A1-208ENST00000494780 APH1AQ96BI3 265 aa20.5■□□□□ 0.87
COL27A1-208ENST00000494780 DPY30Q9C005 99 aa20.5■□□□□ 0.87
COL27A1-208ENST00000494780 CTPS2Q9NRF8 586 aa20.5■□□□□ 0.87
COL27A1-208ENST00000494780 MGAT4BQ9UQ53 548 aa20.5■□□□□ 0.87
COL27A1-208ENST00000494780 NOSIPQ9Y314 301 aaKnown RBP20.5■□□□□ 0.87
COL27A1-208ENST00000494780 HDGFL3Q9Y3E1 203 aa20.5■□□□□ 0.87
COL27A1-208ENST00000494780 ATRQ13535 2644 aa20.49■□□□□ 0.87
COL27A1-208ENST00000494780 GPR171O14626 319 aa20.49■□□□□ 0.87
COL27A1-208ENST00000494780 ITM2AO43736 263 aa20.49■□□□□ 0.87
COL27A1-208ENST00000494780 TLX2O43763 284 aaPredicted RBP20.49■□□□□ 0.87
COL27A1-208ENST00000494780 ADAM11O75078 769 aa20.49■□□□□ 0.87
COL27A1-208ENST00000494780 NDUFS7O75251 213 aa20.49■□□□□ 0.87
COL27A1-208ENST00000494780 PMS2P2O95744 297 aa20.49■□□□□ 0.87
COL27A1-208ENST00000494780 CASP9P55211 416 aa20.49■□□□□ 0.87
COL27A1-208ENST00000494780 AGAP6Q5VW22 663 aa20.49■□□□□ 0.87
COL27A1-208ENST00000494780 SAXO2Q658L1 398 aa20.49■□□□□ 0.87
COL27A1-208ENST00000494780 TNFAIP8L2Q6P589 184 aaPredicted RBP20.49■□□□□ 0.87
COL27A1-208ENST00000494780 TMEM108Q6UXF1 575 aa20.49■□□□□ 0.87
COL27A1-208ENST00000494780 GRINAQ7Z429 371 aa20.49■□□□□ 0.87
COL27A1-208ENST00000494780 UBE2J2Q8N2K1 259 aa20.49■□□□□ 0.87
COL27A1-208ENST00000494780 ZNF781Q8N8C0 355 aa20.49■□□□□ 0.87
COL27A1-208ENST00000494780 PIGXQ8TBF5 258 aa20.49■□□□□ 0.87
COL27A1-208ENST00000494780 RAB8BQ92930 207 aa20.49■□□□□ 0.87
COL27A1-208ENST00000494780 TESCQ96BS2 214 aa20.49■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms