RNA–Protein interactions for RNA: ENST00000494646.1

MSH5-218, Transcript of mutS homolog 5, humanhuman

TSL 4

Gene MSH5, Length 528 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-218ENST00000494646 ARL8AQ96BM9 186 aa8.53□□□□□ -1.04
MSH5-218ENST00000494646 PERPQ96FX8 193 aa8.53□□□□□ -1.04
MSH5-218ENST00000494646 OR52E6Q96RD3 313 aa8.53□□□□□ -1.04
MSH5-218ENST00000494646 PANX1Q96RD7 426 aa8.53□□□□□ -1.04
MSH5-218ENST00000494646 ZNF300Q96RE9 604 aaPredicted RBP8.53□□□□□ -1.04
MSH5-218ENST00000494646 CCL19Q99731 98 aa8.53□□□□□ -1.04
MSH5-218ENST00000494646 SAP130Q9H0E3 1048 aa8.53□□□□□ -1.04
MSH5-218ENST00000494646 MANSC1Q9H8J5 431 aa8.53□□□□□ -1.04
MSH5-218ENST00000494646 DLL4Q9NR61 685 aa8.53□□□□□ -1.04
MSH5-218ENST00000494646 CTPS2Q9NRF8 586 aa8.53□□□□□ -1.04
MSH5-218ENST00000494646 ST6GALNAC1Q9NSC7 600 aaPredicted RBP8.53□□□□□ -1.04
MSH5-218ENST00000494646 ACER3Q9NUN7 267 aa8.53□□□□□ -1.04
MSH5-218ENST00000494646 KLHL13Q9P2N7 655 aa8.53□□□□□ -1.04
MSH5-218ENST00000494646 PRSS50Q9UI38 385 aa8.53□□□□□ -1.04
MSH5-218ENST00000494646 BTNL2Q9UIR0 455 aa8.53□□□□□ -1.04
MSH5-218ENST00000494646 ING1Q9UK53 422 aaPredicted RBP8.53□□□□□ -1.04
MSH5-218ENST00000494646 GPR45Q9Y5Y3 372 aa8.53□□□□□ -1.04
MSH5-218ENST00000494646 SULT2B1O00204 365 aa8.52□□□□□ -1.05
MSH5-218ENST00000494646 SMAD9O15198 467 aaKnown RBP8.52□□□□□ -1.05
MSH5-218ENST00000494646 HDAC3O15379 428 aa8.52□□□□□ -1.05
MSH5-218ENST00000494646 ARHGEF9O43307 516 aa8.52□□□□□ -1.05
MSH5-218ENST00000494646 KIAA0513O60268 411 aa8.52□□□□□ -1.05
MSH5-218ENST00000494646 GCM2O75603 506 aaPredicted RBP8.52□□□□□ -1.05
MSH5-218ENST00000494646 PSMB1P20618 241 aaKnown RBP8.52□□□□□ -1.05
MSH5-218ENST00000494646 EDNRAP25101 427 aa8.52□□□□□ -1.05
MSH5-218ENST00000494646 ADSLP30566 484 aaPredicted RBP8.52□□□□□ -1.05
MSH5-218ENST00000494646 IDH2P48735 452 aaKnown RBP8.52□□□□□ -1.05
MSH5-218ENST00000494646 DIO1P49895 249 aa8.52□□□□□ -1.05
MSH5-218ENST00000494646 KHKP50053 298 aa8.52□□□□□ -1.05
MSH5-218ENST00000494646 CAPRIN1Q14444 709 aaKnown RBP8.52□□□□□ -1.05
MSH5-218ENST00000494646 DPY19L1Q2PZI1 675 aa8.52□□□□□ -1.05
MSH5-218ENST00000494646 Q5PR19 223 aa8.52□□□□□ -1.05
MSH5-218ENST00000494646 SHEQ5VZ18 495 aa8.52□□□□□ -1.05
MSH5-218ENST00000494646 ATG16L1Q676U5 607 aa8.52□□□□□ -1.05
MSH5-218ENST00000494646 OGFOD2Q6N063 350 aa8.52□□□□□ -1.05
MSH5-218ENST00000494646 C3orf33Q6P1S2 294 aa8.52□□□□□ -1.05
MSH5-218ENST00000494646 TFAP2EQ6VUC0 442 aa8.52□□□□□ -1.05
MSH5-218ENST00000494646 ZNF704Q6ZNC4 412 aaPredicted RBP8.52□□□□□ -1.05
MSH5-218ENST00000494646 TMPPEQ6ZT21 453 aa8.52□□□□□ -1.05
MSH5-218ENST00000494646 KIRREL3Q8IZU9 778 aa8.52□□□□□ -1.05
MSH5-218ENST00000494646 GABRG1Q8N1C3 465 aa8.52□□□□□ -1.05
MSH5-218ENST00000494646 SLC43A2Q8N370 569 aa8.52□□□□□ -1.05
MSH5-218ENST00000494646 STEAP2Q8NFT2 490 aa8.52□□□□□ -1.05
MSH5-218ENST00000494646 RAB3IL1Q8TBN0 382 aa8.52□□□□□ -1.05
MSH5-218ENST00000494646 ST8SIA1Q92185 356 aa8.52□□□□□ -1.05
MSH5-218ENST00000494646 CCDC115Q96NT0 180 aa8.52□□□□□ -1.05
MSH5-218ENST00000494646 ZBTB18Q99592 522 aa8.52□□□□□ -1.05
MSH5-218ENST00000494646 PSD2Q9BQI7 771 aa8.52□□□□□ -1.05
MSH5-218ENST00000494646 TMBIM4Q9HC24 238 aa8.52□□□□□ -1.05
MSH5-218ENST00000494646 KLHL9Q9P2J3 617 aa8.52□□□□□ -1.05
MSH5-218ENST00000494646 SLC35A3Q9Y2D2 325 aa8.52□□□□□ -1.05
MSH5-218ENST00000494646 ZANQ9Y493 2812 aa8.52□□□□□ -1.05
MSH5-218ENST00000494646 ALPK2Q86TB3 2170 aa8.51□□□□□ -1.05
MSH5-218ENST00000494646 TRPC5OSA6NMA1 111 aa8.51□□□□□ -1.05
MSH5-218ENST00000494646 ETV2O00321 342 aaPredicted RBP8.51□□□□□ -1.05
MSH5-218ENST00000494646 AP3D1O14617 1153 aa8.51□□□□□ -1.05
MSH5-218ENST00000494646 SMAD7O15105 426 aaKnown RBP8.51□□□□□ -1.05
MSH5-218ENST00000494646 CYTIPO60759 359 aa8.51□□□□□ -1.05
MSH5-218ENST00000494646 DNAJA2O60884 412 aa8.51□□□□□ -1.05
MSH5-218ENST00000494646 ADAM11O75078 769 aa8.51□□□□□ -1.05
MSH5-218ENST00000494646 SLC22A3O75751 556 aa8.51□□□□□ -1.05
MSH5-218ENST00000494646 LYZL6O75951 148 aa8.51□□□□□ -1.05
MSH5-218ENST00000494646 IGHV3-9P01782 118 aa8.51□□□□□ -1.05
MSH5-218ENST00000494646 FESP07332 822 aa8.51□□□□□ -1.05
MSH5-218ENST00000494646 CHRM4P08173 479 aa8.51□□□□□ -1.05
MSH5-218ENST00000494646 INHBBP09529 407 aa8.51□□□□□ -1.05
MSH5-218ENST00000494646 NR2F1P10589 423 aa8.51□□□□□ -1.05
MSH5-218ENST00000494646 FOSL1P15407 271 aa8.51□□□□□ -1.05
MSH5-218ENST00000494646 IL7RP16871 459 aa8.51□□□□□ -1.05
MSH5-218ENST00000494646 IL32P24001 234 aa8.51□□□□□ -1.05
MSH5-218ENST00000494646 APOBEC1P41238 236 aaKnown RBP8.51□□□□□ -1.05
MSH5-218ENST00000494646 OR2B6P58173 313 aa8.51□□□□□ -1.05
MSH5-218ENST00000494646 HPCAP84074 193 aa8.51□□□□□ -1.05
MSH5-218ENST00000494646 ITGADQ13349 1161 aa8.51□□□□□ -1.05
MSH5-218ENST00000494646 TAB1Q15750 504 aa8.51□□□□□ -1.05
MSH5-218ENST00000494646 SYT14P1Q58G82 188 aa8.51□□□□□ -1.05
MSH5-218ENST00000494646 BEND6Q5SZJ8 279 aaPredicted RBP8.51□□□□□ -1.05
MSH5-218ENST00000494646 LRRC74BQ6ZQY2 392 aa8.51□□□□□ -1.05
MSH5-218ENST00000494646 BHLHA15Q7RTS1 189 aaPredicted RBP8.51□□□□□ -1.05
MSH5-218ENST00000494646 YTHDF3Q7Z739 585 aaKnown RBP8.51□□□□□ -1.05
MSH5-218ENST00000494646 ATG4DQ86TL0 474 aaPredicted RBP8.51□□□□□ -1.05
MSH5-218ENST00000494646 ADGRG3Q86Y34 549 aa8.51□□□□□ -1.05
MSH5-218ENST00000494646 CCDC103Q8IW40 242 aa8.51□□□□□ -1.05
MSH5-218ENST00000494646 ZNF100Q8IYN0 542 aa8.51□□□□□ -1.05
MSH5-218ENST00000494646 LRRC34Q8IZ02 419 aa8.51□□□□□ -1.05
MSH5-218ENST00000494646 CIARTQ8N365 385 aaPredicted RBP8.51□□□□□ -1.05
MSH5-218ENST00000494646 ARFGAP2Q8N6H7 521 aa8.51□□□□□ -1.05
MSH5-218ENST00000494646 TRIML2Q8N7C3 387 aa8.51□□□□□ -1.05
MSH5-218ENST00000494646 AKAP1Q92667 903 aaKnown RBP eCLIP8.51□□□□□ -1.05
MSH5-218ENST00000494646 ZNF75CPQ92670 426 aaPredicted RBP8.51□□□□□ -1.05
MSH5-218ENST00000494646 NEUROG1Q92886 237 aa8.51□□□□□ -1.05
MSH5-218ENST00000494646 ARL5BQ96KC2 179 aa8.51□□□□□ -1.05
MSH5-218ENST00000494646 C18orf12Q96KH6 178 aa8.51□□□□□ -1.05
MSH5-218ENST00000494646 Q96MF0 132 aa8.51□□□□□ -1.05
MSH5-218ENST00000494646 OR52B2Q96RD2 323 aa8.51□□□□□ -1.05
MSH5-218ENST00000494646 PIP5K1AQ99755 562 aa8.51□□□□□ -1.05
MSH5-218ENST00000494646 TACO1Q9BSH4 297 aaKnown RBP8.51□□□□□ -1.05
MSH5-218ENST00000494646 CCDC106Q9BWC9 280 aa8.51□□□□□ -1.05
MSH5-218ENST00000494646 HDHD5Q9BXW7 423 aa8.51□□□□□ -1.05
MSH5-218ENST00000494646 OR11A1Q9GZK7 315 aa8.51□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms