RNA–Protein interactions for RNA: ENST00000494069.1

LRCH3-219, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

TSL 5

Gene LRCH3, Length 783 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-219ENST00000494069 FAM71CQ8NEG0 241 aa7.59□□□□□ -1.19
LRCH3-219ENST00000494069 VPS37AQ8NEZ2 397 aa7.59□□□□□ -1.19
LRCH3-219ENST00000494069 CNOT9Q92600 299 aaKnown RBP7.59□□□□□ -1.19
LRCH3-219ENST00000494069 ZNF75CPQ92670 426 aaPredicted RBP7.59□□□□□ -1.19
LRCH3-219ENST00000494069 CPNE4Q96A23 557 aaPredicted RBP7.59□□□□□ -1.19
LRCH3-219ENST00000494069 ARL8AQ96BM9 186 aa7.59□□□□□ -1.19
LRCH3-219ENST00000494069 S100PBPQ96BU1 408 aa7.59□□□□□ -1.19
LRCH3-219ENST00000494069 MAELQ96JY0 434 aaKnown RBP7.59□□□□□ -1.19
LRCH3-219ENST00000494069 OR52B2Q96RD2 323 aa7.59□□□□□ -1.19
LRCH3-219ENST00000494069 OR52E6Q96RD3 313 aa7.59□□□□□ -1.19
LRCH3-219ENST00000494069 PANX1Q96RD7 426 aa7.59□□□□□ -1.19
LRCH3-219ENST00000494069 ZNF300Q96RE9 604 aaPredicted RBP7.59□□□□□ -1.19
LRCH3-219ENST00000494069 SMR3AQ99954 134 aa7.59□□□□□ -1.19
LRCH3-219ENST00000494069 ACTR6Q9GZN1 396 aa7.59□□□□□ -1.19
LRCH3-219ENST00000494069 SLC38A1Q9H2H9 487 aa7.59□□□□□ -1.19
LRCH3-219ENST00000494069 MANSC1Q9H8J5 431 aa7.59□□□□□ -1.19
LRCH3-219ENST00000494069 TIGARQ9NQ88 270 aa7.59□□□□□ -1.19
LRCH3-219ENST00000494069 CTPS2Q9NRF8 586 aa7.59□□□□□ -1.19
LRCH3-219ENST00000494069 GLRX2Q9NS18 164 aa7.59□□□□□ -1.19
LRCH3-219ENST00000494069 KLHL13Q9P2N7 655 aa7.59□□□□□ -1.19
LRCH3-219ENST00000494069 PRSS50Q9UI38 385 aa7.59□□□□□ -1.19
LRCH3-219ENST00000494069 EDARQ9UNE0 448 aa7.59□□□□□ -1.19
LRCH3-219ENST00000494069 ROS1P08922 2347 aa7.58□□□□□ -1.2
LRCH3-219ENST00000494069 NF1P21359 2839 aa7.58□□□□□ -1.2
LRCH3-219ENST00000494069 GJE1A6NN92 205 aa7.58□□□□□ -1.2
LRCH3-219ENST00000494069 RAMP1O60894 148 aa7.58□□□□□ -1.2
LRCH3-219ENST00000494069 GCM2O75603 506 aaPredicted RBP7.58□□□□□ -1.2
LRCH3-219ENST00000494069 SLC22A3O75751 556 aa7.58□□□□□ -1.2
LRCH3-219ENST00000494069 PRKD3O94806 890 aa7.58□□□□□ -1.2
LRCH3-219ENST00000494069 AGR2O95994 175 aa7.58□□□□□ -1.2
LRCH3-219ENST00000494069 ADAP00813 363 aa7.58□□□□□ -1.2
LRCH3-219ENST00000494069 PGCP20142 388 aa7.58□□□□□ -1.2
LRCH3-219ENST00000494069 PSMB1P20618 241 aaKnown RBP7.58□□□□□ -1.2
LRCH3-219ENST00000494069 MVDP53602 400 aa7.58□□□□□ -1.2
LRCH3-219ENST00000494069 RAC3P60763 192 aa7.58□□□□□ -1.2
LRCH3-219ENST00000494069 NKX6-1P78426 367 aaPredicted RBP7.58□□□□□ -1.2
LRCH3-219ENST00000494069 KCNJ10P78508 379 aa7.58□□□□□ -1.2
LRCH3-219ENST00000494069 RNPS1Q15287 305 aaKnown RBP7.58□□□□□ -1.2
LRCH3-219ENST00000494069 DPY19L1Q2PZI1 675 aa7.58□□□□□ -1.2
LRCH3-219ENST00000494069 AP1ARQ63HQ0 302 aa7.58□□□□□ -1.2
LRCH3-219ENST00000494069 GTF2IRD2BQ6EKJ0 949 aa7.58□□□□□ -1.2
LRCH3-219ENST00000494069 BEND4Q6ZU67 534 aa7.58□□□□□ -1.2
LRCH3-219ENST00000494069 EIF3MQ7L2H7 374 aaKnown RBP7.58□□□□□ -1.2
LRCH3-219ENST00000494069 GTF2IRD2Q86UP8 949 aa7.58□□□□□ -1.2
LRCH3-219ENST00000494069 KIRREL3Q8IZU9 778 aa7.58□□□□□ -1.2
LRCH3-219ENST00000494069 OR9I1Q8NGQ6 314 aa7.58□□□□□ -1.2
LRCH3-219ENST00000494069 RAB3IL1Q8TBN0 382 aa7.58□□□□□ -1.2
LRCH3-219ENST00000494069 ST8SIA1Q92185 356 aa7.58□□□□□ -1.2
LRCH3-219ENST00000494069 PLPPR2Q96GM1 343 aa7.58□□□□□ -1.2
LRCH3-219ENST00000494069 REXO5Q96IC2 774 aaKnown RBP7.58□□□□□ -1.2
LRCH3-219ENST00000494069 ARL5BQ96KC2 179 aa7.58□□□□□ -1.2
LRCH3-219ENST00000494069 PSD2Q9BQI7 771 aa7.58□□□□□ -1.2
LRCH3-219ENST00000494069 CCDC106Q9BWC9 280 aa7.58□□□□□ -1.2
LRCH3-219ENST00000494069 OR11A1Q9GZK7 315 aa7.58□□□□□ -1.2
LRCH3-219ENST00000494069 POLE3Q9NRF9 147 aa7.58□□□□□ -1.2
LRCH3-219ENST00000494069 BEX4Q9NWD9 120 aaPredicted RBP7.58□□□□□ -1.2
LRCH3-219ENST00000494069 NKIRAS1Q9NYS0 192 aa7.58□□□□□ -1.2
LRCH3-219ENST00000494069 GPR52Q9Y2T5 361 aa7.58□□□□□ -1.2
LRCH3-219ENST00000494069 AGAP5A6NIR3 686 aa7.57□□□□□ -1.2
LRCH3-219ENST00000494069 TRPC5OSA6NMA1 111 aa7.57□□□□□ -1.2
LRCH3-219ENST00000494069 RFXANKO14593 260 aa7.57□□□□□ -1.2
LRCH3-219ENST00000494069 CYTIPO60759 359 aa7.57□□□□□ -1.2
LRCH3-219ENST00000494069 AVPP01185 164 aa7.57□□□□□ -1.2
LRCH3-219ENST00000494069 FESP07332 822 aa7.57□□□□□ -1.2
LRCH3-219ENST00000494069 YES1P07947 543 aa7.57□□□□□ -1.2
LRCH3-219ENST00000494069 GUSBP08236 651 aa7.57□□□□□ -1.2
LRCH3-219ENST00000494069 PABPC4LP0CB38 370 aaKnown RBP7.57□□□□□ -1.2
LRCH3-219ENST00000494069 TFPIP10646 304 aa7.57□□□□□ -1.2
LRCH3-219ENST00000494069 ETFAP13804 333 aa7.57□□□□□ -1.2
LRCH3-219ENST00000494069 NTF4P34130 210 aa7.57□□□□□ -1.2
LRCH3-219ENST00000494069 IDH2P48735 452 aaKnown RBP7.57□□□□□ -1.2
LRCH3-219ENST00000494069 DIO1P49895 249 aa7.57□□□□□ -1.2
LRCH3-219ENST00000494069 SLC18A1P54219 525 aa7.57□□□□□ -1.2
LRCH3-219ENST00000494069 RASGEF1BQ0VAM2 473 aa7.57□□□□□ -1.2
LRCH3-219ENST00000494069 PDCD4Q53EL6 469 aaKnown RBP7.57□□□□□ -1.2
LRCH3-219ENST00000494069 SYT14P1Q58G82 188 aa7.57□□□□□ -1.2
LRCH3-219ENST00000494069 BEX5Q5H9J7 111 aa7.57□□□□□ -1.2
LRCH3-219ENST00000494069 SFRP5Q5T4F7 317 aa7.57□□□□□ -1.2
LRCH3-219ENST00000494069 ATG16L1Q676U5 607 aa7.57□□□□□ -1.2
LRCH3-219ENST00000494069 C3orf33Q6P1S2 294 aa7.57□□□□□ -1.2
LRCH3-219ENST00000494069 ZNF704Q6ZNC4 412 aaPredicted RBP7.57□□□□□ -1.2
LRCH3-219ENST00000494069 TMPPEQ6ZT21 453 aa7.57□□□□□ -1.2
LRCH3-219ENST00000494069 Q71RC1 249 aaPredicted RBP7.57□□□□□ -1.2
LRCH3-219ENST00000494069 STK32CQ86UX6 486 aa7.57□□□□□ -1.2
LRCH3-219ENST00000494069 ADGRG3Q86Y34 549 aa7.57□□□□□ -1.2
LRCH3-219ENST00000494069 CCDC103Q8IW40 242 aa7.57□□□□□ -1.2
LRCH3-219ENST00000494069 CIARTQ8N365 385 aaPredicted RBP7.57□□□□□ -1.2
LRCH3-219ENST00000494069 SLC43A2Q8N370 569 aa7.57□□□□□ -1.2
LRCH3-219ENST00000494069 ARFGAP2Q8N6H7 521 aa7.57□□□□□ -1.2
LRCH3-219ENST00000494069 ZNF563Q8TA94 476 aa7.57□□□□□ -1.2
LRCH3-219ENST00000494069 TMEM234Q8WY98 164 aa7.57□□□□□ -1.2
LRCH3-219ENST00000494069 VPS33AQ96AX1 596 aa7.57□□□□□ -1.2
LRCH3-219ENST00000494069 PERPQ96FX8 193 aa7.57□□□□□ -1.2
LRCH3-219ENST00000494069 AURKBQ96GD4 344 aaPredicted RBP7.57□□□□□ -1.2
LRCH3-219ENST00000494069 TRNT1Q96Q11 434 aaKnown RBP7.57□□□□□ -1.2
LRCH3-219ENST00000494069 ZBTB18Q99592 522 aa7.57□□□□□ -1.2
LRCH3-219ENST00000494069 BCO1Q9HAY6 547 aa7.57□□□□□ -1.2
LRCH3-219ENST00000494069 SLCO1B3Q9NPD5 702 aa7.57□□□□□ -1.2
LRCH3-219ENST00000494069 SDR39U1Q9NRG7 319 aaPredicted RBP7.57□□□□□ -1.2
LRCH3-219ENST00000494069 SERINC1Q9NRX5 453 aa7.57□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms