RNA–Protein interactions for RNA: ENST00000493732.5

NPHP3-209, Transcript of nephrocystin 3, humanhuman

TSL 2

Gene NPHP3, Length 1,933 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3-209ENST00000493732 CSTAP01040 98 aa8.89□□□□□ -0.99
NPHP3-209ENST00000493732 PROS1P07225 676 aa8.89□□□□□ -0.99
NPHP3-209ENST00000493732 CD8BP10966 210 aa8.89□□□□□ -0.99
NPHP3-209ENST00000493732 PNMTP11086 282 aa8.89□□□□□ -0.99
NPHP3-209ENST00000493732 HLA-DMAP28067 261 aa8.89□□□□□ -0.99
NPHP3-209ENST00000493732 ADH7P40394 386 aa8.89□□□□□ -0.99
NPHP3-209ENST00000493732 GPR3P46089 330 aa8.89□□□□□ -0.99
NPHP3-209ENST00000493732 MAP2K3P46734 347 aa8.89□□□□□ -0.99
NPHP3-209ENST00000493732 RFX3P48380 749 aa8.89□□□□□ -0.99
NPHP3-209ENST00000493732 TGM4P49221 684 aa8.89□□□□□ -0.99
NPHP3-209ENST00000493732 CRYZQ08257 329 aaKnown RBP8.89□□□□□ -0.99
NPHP3-209ENST00000493732 IL10RAQ13651 578 aa8.89□□□□□ -0.99
NPHP3-209ENST00000493732 CRMP1Q14194 572 aa8.89□□□□□ -0.99
NPHP3-209ENST00000493732 GGTLC2Q14390 218 aa8.89□□□□□ -0.99
NPHP3-209ENST00000493732 ZNF267Q14586 743 aaPredicted RBP8.89□□□□□ -0.99
NPHP3-209ENST00000493732 PON3Q15166 354 aa8.89□□□□□ -0.99
NPHP3-209ENST00000493732 CCDC58Q4VC31 144 aa8.89□□□□□ -0.99
NPHP3-209ENST00000493732 TMEM31Q5JXX7 168 aa8.89□□□□□ -0.99
NPHP3-209ENST00000493732 VASNQ6EMK4 673 aa8.89□□□□□ -0.99
NPHP3-209ENST00000493732 THSD4Q6ZMP0 1018 aa8.89□□□□□ -0.99
NPHP3-209ENST00000493732 TMEM99Q8N816 258 aa8.89□□□□□ -0.99
NPHP3-209ENST00000493732 DUSP18Q8NEJ0 188 aa8.89□□□□□ -0.99
NPHP3-209ENST00000493732 OR5M3Q8NGP4 307 aa8.89□□□□□ -0.99
NPHP3-209ENST00000493732 OR6F1Q8NGZ6 308 aa8.89□□□□□ -0.99
NPHP3-209ENST00000493732 TNFRSF13CQ96RJ3 184 aa8.89□□□□□ -0.99
NPHP3-209ENST00000493732 MFRPQ9BY79 579 aa8.89□□□□□ -0.99
NPHP3-209ENST00000493732 C11orf54Q9H0W9 315 aaPredicted RBP8.89□□□□□ -0.99
NPHP3-209ENST00000493732 ISG20L2Q9H9L3 353 aaKnown RBP8.89□□□□□ -0.99
NPHP3-209ENST00000493732 ADGRL4Q9HBW9 690 aa8.89□□□□□ -0.99
NPHP3-209ENST00000493732 CAPN10Q9HC96 672 aa8.89□□□□□ -0.99
NPHP3-209ENST00000493732 NEK6Q9HC98 313 aa8.89□□□□□ -0.99
NPHP3-209ENST00000493732 RBFOX1Q9NWB1 397 aaKnown RBP8.89□□□□□ -0.99
NPHP3-209ENST00000493732 ZNF337Q9Y3M9 751 aa8.89□□□□□ -0.99
NPHP3-209ENST00000493732 ARHGEF17Q96PE2 2063 aaPredicted RBP8.89□□□□□ -0.99
NPHP3-209ENST00000493732 TRAV27A0A087WT01 109 aa8.88□□□□□ -0.99
NPHP3-209ENST00000493732 TRAV1-2A0A0B4J238 106 aa8.88□□□□□ -0.99
NPHP3-209ENST00000493732 ANKRD61A6NGH8 418 aa8.88□□□□□ -0.99
NPHP3-209ENST00000493732 CENPXA8MT69 81 aa8.88□□□□□ -0.99
NPHP3-209ENST00000493732 GATBO75879 557 aaKnown RBP8.88□□□□□ -0.99
NPHP3-209ENST00000493732 PPP1R3DO95685 299 aa8.88□□□□□ -0.99
NPHP3-209ENST00000493732 RBMS1P29558 406 aaKnown RBP8.88□□□□□ -0.99
NPHP3-209ENST00000493732 LCN1P31025 176 aa8.88□□□□□ -0.99
NPHP3-209ENST00000493732 MLLT3P42568 568 aaPredicted RBP8.88□□□□□ -0.99
NPHP3-209ENST00000493732 GBX2P52951 348 aaPredicted RBP8.88□□□□□ -0.99
NPHP3-209ENST00000493732 TFF2Q03403 129 aa8.88□□□□□ -0.99
NPHP3-209ENST00000493732 FZD5Q13467 585 aa8.88□□□□□ -0.99
NPHP3-209ENST00000493732 GRM7Q14831 915 aa8.88□□□□□ -0.99
NPHP3-209ENST00000493732 COL19A1Q14993 1142 aa8.88□□□□□ -0.99
NPHP3-209ENST00000493732 ZNF542PQ5EBM4 170 aa8.88□□□□□ -0.99
NPHP3-209ENST00000493732 ZNF362Q5T0B9 420 aaPredicted RBP8.88□□□□□ -0.99
NPHP3-209ENST00000493732 MED25Q71SY5 747 aa8.88□□□□□ -0.99
NPHP3-209ENST00000493732 CARFQ8N187 725 aa8.88□□□□□ -0.99
NPHP3-209ENST00000493732 CADM2Q8N3J6 435 aa8.88□□□□□ -0.99
NPHP3-209ENST00000493732 FAM98AQ8NCA5 519 aaKnown RBP8.88□□□□□ -0.99
NPHP3-209ENST00000493732 RCBTB1Q8NDN9 531 aa8.88□□□□□ -0.99
NPHP3-209ENST00000493732 ABHD4Q8TB40 342 aa8.88□□□□□ -0.99
NPHP3-209ENST00000493732 ZNF486Q96H40 463 aaPredicted RBP8.88□□□□□ -0.99
NPHP3-209ENST00000493732 PEX11GQ96HA9 241 aa8.88□□□□□ -0.99
NPHP3-209ENST00000493732 PTCHD1Q96NR3 888 aa8.88□□□□□ -0.99
NPHP3-209ENST00000493732 ERMAPQ96PL5 475 aaPredicted RBP8.88□□□□□ -0.99
NPHP3-209ENST00000493732 CNN2Q99439 309 aaKnown RBP8.88□□□□□ -0.99
NPHP3-209ENST00000493732 SLC38A3Q99624 504 aa8.88□□□□□ -0.99
NPHP3-209ENST00000493732 TMEM43Q9BTV4 400 aa8.88□□□□□ -0.99
NPHP3-209ENST00000493732 LRRC61Q9BV99 259 aa8.88□□□□□ -0.99
NPHP3-209ENST00000493732 RAB33BQ9H082 229 aa8.88□□□□□ -0.99
NPHP3-209ENST00000493732 ENKD1Q9H0I2 346 aa8.88□□□□□ -0.99
NPHP3-209ENST00000493732 OR10A5Q9H207 317 aa8.88□□□□□ -0.99
NPHP3-209ENST00000493732 MED20Q9H944 212 aa8.88□□□□□ -0.99
NPHP3-209ENST00000493732 ERVMER34-1Q9H9K5 563 aa8.88□□□□□ -0.99
NPHP3-209ENST00000493732 MCCC2Q9HCC0 563 aa8.88□□□□□ -0.99
NPHP3-209ENST00000493732 CHRNA9Q9UGM1 479 aa8.88□□□□□ -0.99
NPHP3-209ENST00000493732 FAM172BPA6NC97 362 aa8.88□□□□□ -0.99
NPHP3-209ENST00000493732 TLCD2A6NGC4 264 aa8.88□□□□□ -0.99
NPHP3-209ENST00000493732 B4DXG7 233 aa8.88□□□□□ -0.99
NPHP3-209ENST00000493732 C2CD4DB7Z1M9 353 aa8.88□□□□□ -0.99
NPHP3-209ENST00000493732 J3QLW9 94 aa8.88□□□□□ -0.99
NPHP3-209ENST00000493732 HRO43593 1189 aa8.88□□□□□ -0.99
NPHP3-209ENST00000493732 FOXS1O43638 330 aa8.88□□□□□ -0.99
NPHP3-209ENST00000493732 REM1O75628 298 aa8.88□□□□□ -0.99
NPHP3-209ENST00000493732 CSF2P04141 144 aa8.88□□□□□ -0.99
NPHP3-209ENST00000493732 CELA2BP08218 269 aaPredicted RBP8.88□□□□□ -0.99
NPHP3-209ENST00000493732 APEHP13798 732 aaKnown RBP8.88□□□□□ -0.99
NPHP3-209ENST00000493732 HPGDP15428 266 aa8.88□□□□□ -0.99
NPHP3-209ENST00000493732 NME1P15531 152 aaKnown RBP8.88□□□□□ -0.99
NPHP3-209ENST00000493732 ZNF19P17023 458 aa8.88□□□□□ -0.99
NPHP3-209ENST00000493732 CD27P26842 260 aa8.88□□□□□ -0.99
NPHP3-209ENST00000493732 APEX1P27695 318 aaKnown RBP8.88□□□□□ -0.99
NPHP3-209ENST00000493732 C1orf61Q13536 156 aa8.88□□□□□ -0.99
NPHP3-209ENST00000493732 CARTPTQ16568 116 aa8.88□□□□□ -0.99
NPHP3-209ENST00000493732 DEFB110Q30KQ9 67 aa8.88□□□□□ -0.99
NPHP3-209ENST00000493732 ZFP69Q49AA0 526 aa8.88□□□□□ -0.99
NPHP3-209ENST00000493732 IDNKQ5T6J7 187 aa8.88□□□□□ -0.99
NPHP3-209ENST00000493732 BICRALQ6AI39 1079 aa8.88□□□□□ -0.99
NPHP3-209ENST00000493732 DMKNQ6E0U4 476 aaPredicted RBP8.88□□□□□ -0.99
NPHP3-209ENST00000493732 ARL9Q6T311 187 aa8.88□□□□□ -0.99
NPHP3-209ENST00000493732 BAIAP2L2Q6UXY1 529 aa8.88□□□□□ -0.99
NPHP3-209ENST00000493732 DGAT2L6Q6ZPD8 337 aa8.88□□□□□ -0.99
NPHP3-209ENST00000493732 SPATC1Q76KD6 591 aa8.88□□□□□ -0.99
NPHP3-209ENST00000493732 NUP54Q7Z3B4 507 aa8.88□□□□□ -0.99
NPHP3-209ENST00000493732 CEACAM19Q7Z692 300 aa8.88□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms