RNA–Protein interactions for RNA: ENST00000493430.5

PTCD3-218, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 3

Gene PTCD3, Length 782 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-218ENST00000493430 RNF14Q9UBS8 474 aa2.61□□□□□ -1.99
PTCD3-218ENST00000493430 RARRES3Q9UL19 164 aa2.61□□□□□ -1.99
PTCD3-218ENST00000493430 RPL26L1Q9UNX3 145 aaKnown RBP2.61□□□□□ -1.99
PTCD3-218ENST00000493430 CHMP2BQ9UQN3 213 aa2.61□□□□□ -1.99
PTCD3-218ENST00000493430 ZNF148Q9UQR1 794 aa2.61□□□□□ -1.99
PTCD3-218ENST00000493430 ASF1AQ9Y294 204 aa2.61□□□□□ -1.99
PTCD3-218ENST00000493430 PPP2R2CQ9Y2T4 447 aa2.61□□□□□ -1.99
PTCD3-218ENST00000493430 PTRH2Q9Y3E5 179 aaKnown RBP2.61□□□□□ -1.99
PTCD3-218ENST00000493430 SPIN1Q9Y657 262 aaPredicted RBP2.61□□□□□ -1.99
PTCD3-218ENST00000493430 KCNE2Q9Y6J6 123 aa2.61□□□□□ -1.99
PTCD3-218ENST00000493430 POLQO75417 2590 aa2.61□□□□□ -1.99
PTCD3-218ENST00000493430 ABCA4P78363 2273 aa2.61□□□□□ -1.99
PTCD3-218ENST00000493430 AGRNO00468 2067 aa2.61□□□□□ -1.99
PTCD3-218ENST00000493430 ABCA12Q86UK0 2595 aa2.6□□□□□ -1.99
PTCD3-218ENST00000493430 MAST4O15021 2626 aa2.6□□□□□ -1.99
PTCD3-218ENST00000493430 PRRC2CQ9Y520 2896 aaKnown RBP2.6□□□□□ -1.99
PTCD3-218ENST00000493430 NOTCH2Q04721 2471 aa2.6□□□□□ -1.99
PTCD3-218ENST00000493430 MYO9AB2RTY4 2548 aa2.6□□□□□ -1.99
PTCD3-218ENST00000493430 A0A0A6YYC8 382 aaPredicted RBP2.6□□□□□ -1.99
PTCD3-218ENST00000493430 A0A0J9YY10 115 aa2.6□□□□□ -1.99
PTCD3-218ENST00000493430 MEX3AA1L020 520 aaKnown RBP2.6□□□□□ -1.99
PTCD3-218ENST00000493430 C2orf81A6NN90 581 aa2.6□□□□□ -1.99
PTCD3-218ENST00000493430 A8MUA0 341 aa2.6□□□□□ -1.99
PTCD3-218ENST00000493430 HACD1B0YJ81 288 aa2.6□□□□□ -1.99
PTCD3-218ENST00000493430 I3L1I5 382 aaPredicted RBP2.6□□□□□ -1.99
PTCD3-218ENST00000493430 HAT1O14929 419 aa2.6□□□□□ -1.99
PTCD3-218ENST00000493430 TTI1O43156 1089 aa2.6□□□□□ -1.99
PTCD3-218ENST00000493430 NME6O75414 186 aaPredicted RBP2.6□□□□□ -1.99
PTCD3-218ENST00000493430 RDH16O75452 317 aa2.6□□□□□ -1.99
PTCD3-218ENST00000493430 KLF7O75840 302 aaPredicted RBP2.6□□□□□ -1.99
PTCD3-218ENST00000493430 OR2B3O76000 313 aa2.6□□□□□ -1.99
PTCD3-218ENST00000493430 ANXA9O76027 345 aa2.6□□□□□ -1.99
PTCD3-218ENST00000493430 LRATO95237 230 aa2.6□□□□□ -1.99
PTCD3-218ENST00000493430 CLDN1O95832 211 aa2.6□□□□□ -1.99
PTCD3-218ENST00000493430 ANKRD34CP0C6C1 535 aa2.6□□□□□ -1.99
PTCD3-218ENST00000493430 IL1RNP18510 177 aa2.6□□□□□ -1.99
PTCD3-218ENST00000493430 CYP2A7P20853 494 aa2.6□□□□□ -1.99
PTCD3-218ENST00000493430 PPP2R1BP30154 601 aa2.6□□□□□ -1.99
PTCD3-218ENST00000493430 KRT20P35900 424 aa2.6□□□□□ -1.99
PTCD3-218ENST00000493430 RFC3P40938 356 aa2.6□□□□□ -1.99
PTCD3-218ENST00000493430 HADHAP40939 763 aa2.6□□□□□ -1.99
PTCD3-218ENST00000493430 HNRNPFP52597 415 aaKnown RBP2.6□□□□□ -1.99
PTCD3-218ENST00000493430 CDKN2DP55273 166 aa2.6□□□□□ -1.99
PTCD3-218ENST00000493430 ARF3P61204 181 aaPredicted RBP2.6□□□□□ -1.99
PTCD3-218ENST00000493430 PRAMEP78395 509 aa2.6□□□□□ -1.99
PTCD3-218ENST00000493430 ARF1P84077 181 aaKnown RBP2.6□□□□□ -1.99
PTCD3-218ENST00000493430 PLA2G7Q13093 441 aa2.6□□□□□ -1.99
PTCD3-218ENST00000493430 EIF3IQ13347 325 aaKnown RBP2.6□□□□□ -1.99
PTCD3-218ENST00000493430 PRPSAP1Q14558 356 aa2.6□□□□□ -1.99
PTCD3-218ENST00000493430 NCF4Q15080 339 aa2.6□□□□□ -1.99
PTCD3-218ENST00000493430 RPS6KA1Q15418 735 aa2.6□□□□□ -1.99
PTCD3-218ENST00000493430 PHKG1Q16816 387 aa2.6□□□□□ -1.99
PTCD3-218ENST00000493430 KLHL38Q2WGJ6 581 aa2.6□□□□□ -1.99
PTCD3-218ENST00000493430 PCGF3Q3KNV8 242 aa2.6□□□□□ -1.99
PTCD3-218ENST00000493430 LACTB2Q53H82 288 aaPredicted RBP2.6□□□□□ -1.99
PTCD3-218ENST00000493430 HSP90AA5PQ58FG0 334 aa2.6□□□□□ -1.99
PTCD3-218ENST00000493430 LDLRAP1Q5SW96 308 aa2.6□□□□□ -1.99
PTCD3-218ENST00000493430 MFSD4BQ5TF39 518 aa2.6□□□□□ -1.99
PTCD3-218ENST00000493430 CASC4Q6P4E1 433 aa2.6□□□□□ -1.99
PTCD3-218ENST00000493430 FIP1L1Q6UN15 594 aaKnown RBP2.6□□□□□ -1.99
PTCD3-218ENST00000493430 SPESP1Q6UW49 350 aa2.6□□□□□ -1.99
PTCD3-218ENST00000493430 TMEM207Q6UWW9 146 aa2.6□□□□□ -1.99
PTCD3-218ENST00000493430 C3P1Q6ZMU1 363 aa2.6□□□□□ -1.99
PTCD3-218ENST00000493430 Q6ZR54 194 aa2.6□□□□□ -1.99
PTCD3-218ENST00000493430 RPS27LQ71UM5 84 aaKnown RBP2.6□□□□□ -1.99
PTCD3-218ENST00000493430 ZSCAN30Q86W11 494 aa2.6□□□□□ -1.99
PTCD3-218ENST00000493430 AMIGO1Q86WK6 493 aa2.6□□□□□ -1.99
PTCD3-218ENST00000493430 HOGA1Q86XE5 327 aa2.6□□□□□ -1.99
PTCD3-218ENST00000493430 LACC1Q8IV20 430 aa2.6□□□□□ -1.99
PTCD3-218ENST00000493430 LRRC8AQ8IWT6 810 aa2.6□□□□□ -1.99
PTCD3-218ENST00000493430 CCDC170Q8IYT3 715 aa2.6□□□□□ -1.99
PTCD3-218ENST00000493430 SLC22A15Q8IZD6 547 aa2.6□□□□□ -1.99
PTCD3-218ENST00000493430 NDUFAF2Q8N183 169 aa2.6□□□□□ -1.99
PTCD3-218ENST00000493430 KIF2BQ8N4N8 673 aa2.6□□□□□ -1.99
PTCD3-218ENST00000493430 BRSK1Q8TDC3 778 aa2.6□□□□□ -1.99
PTCD3-218ENST00000493430 LPGAT1Q92604 370 aa2.6□□□□□ -1.99
PTCD3-218ENST00000493430 TSLPQ969D9 159 aa2.6□□□□□ -1.99
PTCD3-218ENST00000493430 UCN3Q969E3 161 aa2.6□□□□□ -1.99
PTCD3-218ENST00000493430 PERPQ96FX8 193 aa2.6□□□□□ -1.99
PTCD3-218ENST00000493430 DCUN1D1Q96GG9 259 aa2.6□□□□□ -1.99
PTCD3-218ENST00000493430 SLC45A3Q96JT2 553 aa2.6□□□□□ -1.99
PTCD3-218ENST00000493430 CNDP1Q96KN2 507 aa2.6□□□□□ -1.99
PTCD3-218ENST00000493430 TSNARE1Q96NA8 513 aa2.6□□□□□ -1.99
PTCD3-218ENST00000493430 BIRC8Q96P09 236 aa2.6□□□□□ -1.99
PTCD3-218ENST00000493430 GBP5Q96PP8 586 aa2.6□□□□□ -1.99
PTCD3-218ENST00000493430 SOSTQ9BQB4 213 aa2.6□□□□□ -1.99
PTCD3-218ENST00000493430 CCM2Q9BSQ5 444 aa2.6□□□□□ -1.99
PTCD3-218ENST00000493430 DGCR6LQ9BY27 220 aa2.6□□□□□ -1.99
PTCD3-218ENST00000493430 WWTR1Q9GZV5 400 aa2.6□□□□□ -1.99
PTCD3-218ENST00000493430 ATG10Q9H0Y0 220 aa2.6□□□□□ -1.99
PTCD3-218ENST00000493430 GHITMQ9H3K2 345 aa2.6□□□□□ -1.99
PTCD3-218ENST00000493430 CLMPQ9H6B4 373 aa2.6□□□□□ -1.99
PTCD3-218ENST00000493430 LRRC40Q9H9A6 602 aa2.6□□□□□ -1.99
PTCD3-218ENST00000493430 CAB39LQ9H9S4 337 aa2.6□□□□□ -1.99
PTCD3-218ENST00000493430 LIN28AQ9H9Z2 209 aaKnown RBP2.6□□□□□ -1.99
PTCD3-218ENST00000493430 FBXO8Q9NRD0 319 aa2.6□□□□□ -1.99
PTCD3-218ENST00000493430 IARS2Q9NSE4 1012 aaKnown RBP2.6□□□□□ -1.99
PTCD3-218ENST00000493430 ASF1BQ9NVP2 202 aa2.6□□□□□ -1.99
PTCD3-218ENST00000493430 GPR83Q9NYM4 423 aa2.6□□□□□ -1.99
PTCD3-218ENST00000493430 NUDT4Q9NZJ9 180 aa2.6□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 55.9 ms