RNA–Protein interactions for RNA: ENST00000493177.1

MSH6-208, Transcript of mutS homolog 6, humanhuman

TSL 3

Gene MSH6, Length 813 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-208ENST00000493177 C7orf34Q96L11 122 aa12.17□□□□□ -0.46
MSH6-208ENST00000493177 ZNF300Q96RE9 604 aaPredicted RBP12.17□□□□□ -0.46
MSH6-208ENST00000493177 TRIM2Q9C040 744 aa12.17□□□□□ -0.46
MSH6-208ENST00000493177 DEFB127Q9H1M4 99 aa12.17□□□□□ -0.46
MSH6-208ENST00000493177 LDAHQ9H6V9 325 aa12.17□□□□□ -0.46
MSH6-208ENST00000493177 TAS2R10Q9NYW0 307 aa12.17□□□□□ -0.46
MSH6-208ENST00000493177 VDAC3Q9Y277 283 aa12.17□□□□□ -0.46
MSH6-208ENST00000493177 NINQ8N4C6 2090 aa12.16□□□□□ -0.46
MSH6-208ENST00000493177 LRRC3CA6NJW4 275 aa12.16□□□□□ -0.46
MSH6-208ENST00000493177 CYSRT1A8MQ03 144 aa12.16□□□□□ -0.46
MSH6-208ENST00000493177 H0Y3Z8 333 aa12.16□□□□□ -0.46
MSH6-208ENST00000493177 GNGT2O14610 69 aa12.16□□□□□ -0.46
MSH6-208ENST00000493177 ZNHIT1O43257 154 aa12.16□□□□□ -0.46
MSH6-208ENST00000493177 TPST2O60704 377 aa12.16□□□□□ -0.46
MSH6-208ENST00000493177 ADAM11O75078 769 aa12.16□□□□□ -0.46
MSH6-208ENST00000493177 CBR3O75828 277 aa12.16□□□□□ -0.46
MSH6-208ENST00000493177 TRAPPC6AO75865 159 aa12.16□□□□□ -0.46
MSH6-208ENST00000493177 WISP2O76076 250 aa12.16□□□□□ -0.46
MSH6-208ENST00000493177 BAG2O95816 211 aa12.16□□□□□ -0.46
MSH6-208ENST00000493177 HK1P19367 917 aa12.16□□□□□ -0.46
MSH6-208ENST00000493177 DPP4P27487 766 aa12.16□□□□□ -0.46
MSH6-208ENST00000493177 GDF1P27539 372 aa12.16□□□□□ -0.46
MSH6-208ENST00000493177 HTR2AP28223 471 aa12.16□□□□□ -0.46
MSH6-208ENST00000493177 SPIBQ01892 262 aa12.16□□□□□ -0.46
MSH6-208ENST00000493177 PIN1Q13526 163 aaPredicted RBP12.16□□□□□ -0.46
MSH6-208ENST00000493177 GANABQ14697 944 aaKnown RBP12.16□□□□□ -0.46
MSH6-208ENST00000493177 QPRTQ15274 297 aa12.16□□□□□ -0.46
MSH6-208ENST00000493177 TOMM34Q15785 309 aaPredicted RBP12.16□□□□□ -0.46
MSH6-208ENST00000493177 WBP2NLQ6ICG8 309 aa12.16□□□□□ -0.46
MSH6-208ENST00000493177 ARSKQ6UWY0 536 aa12.16□□□□□ -0.46
MSH6-208ENST00000493177 CD163Q86VB7 1156 aa12.16□□□□□ -0.46
MSH6-208ENST00000493177 TMEM234Q8WY98 164 aa12.16□□□□□ -0.46
MSH6-208ENST00000493177 C1GALT1C1Q96EU7 318 aa12.16□□□□□ -0.46
MSH6-208ENST00000493177 DUS3LQ96G46 650 aaKnown RBP12.16□□□□□ -0.46
MSH6-208ENST00000493177 PRRC1Q96M27 445 aa12.16□□□□□ -0.46
MSH6-208ENST00000493177 ZNF347Q96SE7 839 aa12.16□□□□□ -0.46
MSH6-208ENST00000493177 KLHDC3Q9BQ90 382 aa12.16□□□□□ -0.46
MSH6-208ENST00000493177 FNDC11Q9BVV2 318 aa12.16□□□□□ -0.46
MSH6-208ENST00000493177 TTTY12Q9BZ98 90 aa12.16□□□□□ -0.46
MSH6-208ENST00000493177 MED17Q9NVC6 651 aa12.16□□□□□ -0.46
MSH6-208ENST00000493177 ARMC1Q9NVT9 282 aa12.16□□□□□ -0.46
MSH6-208ENST00000493177 NDUFAF4Q9P032 175 aa12.16□□□□□ -0.46
MSH6-208ENST00000493177 RHCGQ9UBD6 479 aa12.16□□□□□ -0.46
MSH6-208ENST00000493177 C15orf41Q9Y2V0 281 aa12.16□□□□□ -0.46
MSH6-208ENST00000493177 TESMINQ9Y4I5 508 aa12.16□□□□□ -0.46
MSH6-208ENST00000493177 B4DXG7 233 aa12.15□□□□□ -0.46
MSH6-208ENST00000493177 HNRNPRO43390 633 aaKnown RBP12.15□□□□□ -0.46
MSH6-208ENST00000493177 FMO6PO60774 539 aa12.15□□□□□ -0.46
MSH6-208ENST00000493177 CST1P01037 141 aa12.15□□□□□ -0.46
MSH6-208ENST00000493177 FCGR1AP12314 374 aa12.15□□□□□ -0.46
MSH6-208ENST00000493177 RHCEP18577 417 aa12.15□□□□□ -0.46
MSH6-208ENST00000493177 FASP25445 335 aa12.15□□□□□ -0.46
MSH6-208ENST00000493177 MAGEA2P43356 314 aa12.15□□□□□ -0.46
MSH6-208ENST00000493177 DSCR4P56555 118 aaPredicted RBP12.15□□□□□ -0.46
MSH6-208ENST00000493177 FOXO1Q12778 655 aa12.15□□□□□ -0.46
MSH6-208ENST00000493177 ARHGAP11AQ6P4F7 1023 aa12.15□□□□□ -0.46
MSH6-208ENST00000493177 AAGABQ6PD74 315 aa12.15□□□□□ -0.46
MSH6-208ENST00000493177 POMZP3Q6PJE2 187 aa12.15□□□□□ -0.46
MSH6-208ENST00000493177 C3P1Q6ZMU1 363 aa12.15□□□□□ -0.46
MSH6-208ENST00000493177 PIWIL3Q7Z3Z3 882 aaKnown RBP12.15□□□□□ -0.46
MSH6-208ENST00000493177 FAM109AQ8N4B1 249 aa12.15□□□□□ -0.46
MSH6-208ENST00000493177 ZNF808Q8N4W9 903 aaPredicted RBP12.15□□□□□ -0.46
MSH6-208ENST00000493177 PAPD5Q8NDF8 572 aaKnown RBP12.15□□□□□ -0.46
MSH6-208ENST00000493177 ADAMTS16Q8TE57 1224 aa12.15□□□□□ -0.46
MSH6-208ENST00000493177 NTNG2Q96CW9 530 aa12.15□□□□□ -0.46
MSH6-208ENST00000493177 SLC41A3Q96GZ6 507 aa12.15□□□□□ -0.46
MSH6-208ENST00000493177 PIP5K1AQ99755 562 aa12.15□□□□□ -0.46
MSH6-208ENST00000493177 POLR2J2Q9GZM3 115 aaKnown RBP12.15□□□□□ -0.46
MSH6-208ENST00000493177 POLR2J3Q9H1A7 115 aaKnown RBP12.15□□□□□ -0.46
MSH6-208ENST00000493177 A4GNTQ9UNA3 340 aa12.15□□□□□ -0.46
MSH6-208ENST00000493177 ZNF835Q9Y2P0 537 aa12.15□□□□□ -0.46
MSH6-208ENST00000493177 RELNP78509 3460 aa12.15□□□□□ -0.46
MSH6-208ENST00000493177 A0A087WZY1 265 aa12.14□□□□□ -0.47
MSH6-208ENST00000493177 TNFSF12-TNFSF13A0A0A6YY99 330 aa12.14□□□□□ -0.47
MSH6-208ENST00000493177 A0A1B0GWA3 101 aa12.14□□□□□ -0.47
MSH6-208ENST00000493177 TRAPPC13A5PLN9 417 aa12.14□□□□□ -0.47
MSH6-208ENST00000493177 SHISA8B8ZZ34 492 aa12.14□□□□□ -0.47
MSH6-208ENST00000493177 H3BNX3 289 aa12.14□□□□□ -0.47
MSH6-208ENST00000493177 FAAHO00519 579 aa12.14□□□□□ -0.47
MSH6-208ENST00000493177 OR5F1O95221 314 aa12.14□□□□□ -0.47
MSH6-208ENST00000493177 RFPL3SP0C7P2 107 aa12.14□□□□□ -0.47
MSH6-208ENST00000493177 CCNA2P20248 432 aa12.14□□□□□ -0.47
MSH6-208ENST00000493177 SRD5A2P31213 254 aa12.14□□□□□ -0.47
MSH6-208ENST00000493177 RRM2P31350 389 aa12.14□□□□□ -0.47
MSH6-208ENST00000493177 SLC1A3P43003 542 aa12.14□□□□□ -0.47
MSH6-208ENST00000493177 MAGEA5P43359 124 aa12.14□□□□□ -0.47
MSH6-208ENST00000493177 CDH12P55289 794 aa12.14□□□□□ -0.47
MSH6-208ENST00000493177 SESN3P58005 492 aa12.14□□□□□ -0.47
MSH6-208ENST00000493177 ST3GAL3Q11203 375 aa12.14□□□□□ -0.47
MSH6-208ENST00000493177 MERTKQ12866 999 aa12.14□□□□□ -0.47
MSH6-208ENST00000493177 FOXF1Q12946 379 aa12.14□□□□□ -0.47
MSH6-208ENST00000493177 RCN1Q15293 331 aa12.14□□□□□ -0.47
MSH6-208ENST00000493177 CMPK2Q5EBM0 449 aa12.14□□□□□ -0.47
MSH6-208ENST00000493177 ALG10BQ5I7T1 473 aa12.14□□□□□ -0.47
MSH6-208ENST00000493177 RAET1LQ5VY80 246 aa12.14□□□□□ -0.47
MSH6-208ENST00000493177 ZNF787Q6DD87 383 aa12.14□□□□□ -0.47
MSH6-208ENST00000493177 OR2T5Q6IEZ7 315 aa12.14□□□□□ -0.47
MSH6-208ENST00000493177 ZNF613Q6PF04 617 aa12.14□□□□□ -0.47
MSH6-208ENST00000493177 Q6ZPB1 254 aaPredicted RBP12.14□□□□□ -0.47
MSH6-208ENST00000493177 TSEN54Q7Z6J9 526 aaKnown RBP12.14□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms