RNA–Protein interactions for RNA: ENST00000492883.5

CCM2-217, Transcript of CCM2 scaffold protein, humanhuman

TSL 2

Gene CCM2, Length 1,061 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-217ENST00000492883 TACR3P29371 465 aa12.56□□□□□ -0.4
CCM2-217ENST00000492883 POLR2HP52434 150 aaKnown RBP12.56□□□□□ -0.4
CCM2-217ENST00000492883 DLX5P56178 289 aa12.56□□□□□ -0.4
CCM2-217ENST00000492883 MXRA7P84157 204 aa12.56□□□□□ -0.4
CCM2-217ENST00000492883 HOXC5Q00444 222 aa12.56□□□□□ -0.4
CCM2-217ENST00000492883 PON3Q15166 354 aa12.56□□□□□ -0.4
CCM2-217ENST00000492883 GLIPR1L2Q4G1C9 344 aa12.56□□□□□ -0.4
CCM2-217ENST00000492883 FAM91A1Q658Y4 838 aa12.56□□□□□ -0.4
CCM2-217ENST00000492883 C3orf33Q6P1S2 294 aa12.56□□□□□ -0.4
CCM2-217ENST00000492883 C8orf82Q6P1X6 216 aaPredicted RBP12.56□□□□□ -0.4
CCM2-217ENST00000492883 ADGRE4PQ86SQ3 457 aa12.56□□□□□ -0.4
CCM2-217ENST00000492883 ADGRG3Q86Y34 549 aa12.56□□□□□ -0.4
CCM2-217ENST00000492883 MICU2Q8IYU8 434 aa12.56□□□□□ -0.4
CCM2-217ENST00000492883 C9orf106Q8NAJ2 232 aa12.56□□□□□ -0.4
CCM2-217ENST00000492883 MBD3L2Q8NHZ7 208 aaPredicted RBP12.56□□□□□ -0.4
CCM2-217ENST00000492883 FIG4Q92562 907 aa12.56□□□□□ -0.4
CCM2-217ENST00000492883 OSTF1Q92882 214 aa12.56□□□□□ -0.4
CCM2-217ENST00000492883 SLC35B4Q969S0 331 aa12.56□□□□□ -0.4
CCM2-217ENST00000492883 ADGRG7Q96K78 797 aa12.56□□□□□ -0.4
CCM2-217ENST00000492883 TIGARQ9NQ88 270 aa12.56□□□□□ -0.4
CCM2-217ENST00000492883 ESPL1Q14674 2120 aa12.56□□□□□ -0.4
CCM2-217ENST00000492883 TMED7-TICAM2A0A0A6YYA0 188 aa12.55□□□□□ -0.4
CCM2-217ENST00000492883 NME4O00746 187 aa12.55□□□□□ -0.4
CCM2-217ENST00000492883 GSTA4O15217 222 aa12.55□□□□□ -0.4
CCM2-217ENST00000492883 TGM6O95932 706 aa12.55□□□□□ -0.4
CCM2-217ENST00000492883 CXCR1P25024 350 aa12.55□□□□□ -0.4
CCM2-217ENST00000492883 FKBP2P26885 142 aaKnown RBP12.55□□□□□ -0.4
CCM2-217ENST00000492883 CEACAM8P31997 349 aaPredicted RBP12.55□□□□□ -0.4
CCM2-217ENST00000492883 MNAT1P51948 309 aa12.55□□□□□ -0.4
CCM2-217ENST00000492883 KRT72Q14CN4 511 aa12.55□□□□□ -0.4
CCM2-217ENST00000492883 DUSP7Q16829 419 aa12.55□□□□□ -0.4
CCM2-217ENST00000492883 CTU2Q2VPK5 515 aaKnown RBP12.55□□□□□ -0.4
CCM2-217ENST00000492883 CCDC80Q76M96 950 aa12.55□□□□□ -0.4
CCM2-217ENST00000492883 LILRB4Q8NHJ6 448 aa12.55□□□□□ -0.4
CCM2-217ENST00000492883 FNDC9Q8TBE3 224 aa12.55□□□□□ -0.4
CCM2-217ENST00000492883 SLC25A43Q8WUT9 341 aaPredicted RBP12.55□□□□□ -0.4
CCM2-217ENST00000492883 RASSF5Q8WWW0 418 aa12.55□□□□□ -0.4
CCM2-217ENST00000492883 NSL1Q96IY1 281 aa12.55□□□□□ -0.4
CCM2-217ENST00000492883 OR5B2Q96R09 309 aa12.55□□□□□ -0.4
CCM2-217ENST00000492883 RSPO3Q9BXY4 272 aaPredicted RBP12.55□□□□□ -0.4
CCM2-217ENST00000492883 UCK2Q9BZX2 261 aa12.55□□□□□ -0.4
CCM2-217ENST00000492883 ADAM19Q9H013 955 aa12.55□□□□□ -0.4
CCM2-217ENST00000492883 SPAG4Q9NPE6 437 aa12.55□□□□□ -0.4
CCM2-217ENST00000492883 ADA2Q9NZK5 511 aa12.55□□□□□ -0.4
CCM2-217ENST00000492883 RPS6KB2Q9UBS0 482 aa12.55□□□□□ -0.4
CCM2-217ENST00000492883 CHRNA9Q9UGM1 479 aa12.55□□□□□ -0.4
CCM2-217ENST00000492883 OSGIN1Q9UJX0 560 aa12.55□□□□□ -0.4
CCM2-217ENST00000492883 MCTS1Q9ULC4 181 aaKnown RBP12.55□□□□□ -0.4
CCM2-217ENST00000492883 TMED7Q9Y3B3 224 aa12.55□□□□□ -0.4
CCM2-217ENST00000492883 ZNF175Q9Y473 711 aa12.55□□□□□ -0.4
CCM2-217ENST00000492883 A0A1W2PNR3 127 aa12.54□□□□□ -0.4
CCM2-217ENST00000492883 FAM90A27PA6NNH2 459 aa12.54□□□□□ -0.4
CCM2-217ENST00000492883 DVL2O14641 736 aa12.54□□□□□ -0.4
CCM2-217ENST00000492883 RCBTB2O95199 551 aa12.54□□□□□ -0.4
CCM2-217ENST00000492883 CLDN1O95832 211 aa12.54□□□□□ -0.4
CCM2-217ENST00000492883 LGI1O95970 557 aa12.54□□□□□ -0.4
CCM2-217ENST00000492883 C8BP07358 591 aa12.54□□□□□ -0.4
CCM2-217ENST00000492883 TMIGD3P0DMS9 266 aaPredicted RBP12.54□□□□□ -0.4
CCM2-217ENST00000492883 BMP5P22003 454 aa12.54□□□□□ -0.4
CCM2-217ENST00000492883 CTSSP25774 331 aa12.54□□□□□ -0.4
CCM2-217ENST00000492883 KCNJ5P48544 419 aa12.54□□□□□ -0.4
CCM2-217ENST00000492883 RGS8P57771 180 aaPredicted RBP12.54□□□□□ -0.4
CCM2-217ENST00000492883 NCALDP61601 193 aa12.54□□□□□ -0.4
CCM2-217ENST00000492883 CDSNQ15517 529 aa12.54□□□□□ -0.4
CCM2-217ENST00000492883 SYT14P1Q58G82 188 aa12.54□□□□□ -0.4
CCM2-217ENST00000492883 OR2A2Q6IF42 318 aa12.54□□□□□ -0.4
CCM2-217ENST00000492883 MAMDC2Q7Z304 686 aaPredicted RBP12.54□□□□□ -0.4
CCM2-217ENST00000492883 COMTD1Q86VU5 262 aa12.54□□□□□ -0.4
CCM2-217ENST00000492883 LIX1LQ8IVB5 337 aa12.54□□□□□ -0.4
CCM2-217ENST00000492883 NAXEQ8NCW5 288 aa12.54□□□□□ -0.4
CCM2-217ENST00000492883 OR52E4Q8NGH9 312 aa12.54□□□□□ -0.4
CCM2-217ENST00000492883 TAMM41Q96BW9 452 aa12.54□□□□□ -0.4
CCM2-217ENST00000492883 INTS12Q96CB8 462 aaKnown RBP12.54□□□□□ -0.4
CCM2-217ENST00000492883 ZFP3Q96NJ6 502 aa12.54□□□□□ -0.4
CCM2-217ENST00000492883 KCTD14Q9BQ13 255 aaPredicted RBP12.54□□□□□ -0.4
CCM2-217ENST00000492883 ALG2Q9H553 416 aa12.54□□□□□ -0.4
CCM2-217ENST00000492883 EVA1AQ9H8M9 152 aa12.54□□□□□ -0.4
CCM2-217ENST00000492883 TMEM27Q9HBJ8 222 aa12.54□□□□□ -0.4
CCM2-217ENST00000492883 KCNJ16Q9NPI9 418 aa12.54□□□□□ -0.4
CCM2-217ENST00000492883 NDE1Q9NXR1 346 aa12.54□□□□□ -0.4
CCM2-217ENST00000492883 ZNF629Q9UEG4 869 aaPredicted RBP12.54□□□□□ -0.4
CCM2-217ENST00000492883 NCKAP5O14513 1909 aa12.53□□□□□ -0.4
CCM2-217ENST00000492883 TMEM72A0PK05 275 aa12.53□□□□□ -0.4
CCM2-217ENST00000492883 PRSS44E7EML9 344 aa12.53□□□□□ -0.4
CCM2-217ENST00000492883 SYT5O00445 386 aa12.53□□□□□ -0.4
CCM2-217ENST00000492883 FESP07332 822 aa12.53□□□□□ -0.4
CCM2-217ENST00000492883 FCGR2AP12318 317 aa12.53□□□□□ -0.4
CCM2-217ENST00000492883 HTR1EP28566 365 aa12.53□□□□□ -0.4
CCM2-217ENST00000492883 KDELR2P33947 212 aa12.53□□□□□ -0.4
CCM2-217ENST00000492883 OPRM1P35372 400 aa12.53□□□□□ -0.4
CCM2-217ENST00000492883 CLK1P49759 484 aaKnown RBP12.53□□□□□ -0.4
CCM2-217ENST00000492883 GSK3BP49841 420 aa12.53□□□□□ -0.4
CCM2-217ENST00000492883 MAP2K6P52564 334 aa12.53□□□□□ -0.4
CCM2-217ENST00000492883 AGFG1P52594 562 aaKnown RBP12.53□□□□□ -0.4
CCM2-217ENST00000492883 ZNF136P52737 540 aa12.53□□□□□ -0.4
CCM2-217ENST00000492883 SLC25A3Q00325 362 aa12.53□□□□□ -0.4
CCM2-217ENST00000492883 LRRC23Q53EV4 343 aaPredicted RBP12.53□□□□□ -0.4
CCM2-217ENST00000492883 GTF2IRD2BQ6EKJ0 949 aa12.53□□□□□ -0.4
CCM2-217ENST00000492883 C16orf89Q6UX73 402 aa12.53□□□□□ -0.4
CCM2-217ENST00000492883 TMPPEQ6ZT21 453 aa12.53□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms