RNA–Protein interactions for RNA: ENST00000491552.1

MSH5-SAPCD1-206, Transcript of MSH5-SAPCD1 readthrough (NMD candidate), humanhuman

TSL 3

Gene MSH5-SAPCD1, Length 706 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-SAPCD1-206ENST00000491552 CHST11Q9NPF2 352 aa14.62□□□□□ -0.07
MSH5-SAPCD1-206ENST00000491552 KCNJ16Q9NPI9 418 aa14.62□□□□□ -0.07
MSH5-SAPCD1-206ENST00000491552 ZNF629Q9UEG4 869 aaPredicted RBP14.62□□□□□ -0.07
MSH5-SAPCD1-206ENST00000491552 PRDM4Q9UKN5 801 aa14.62□□□□□ -0.07
MSH5-SAPCD1-206ENST00000491552 MCTS1Q9ULC4 181 aaKnown RBP14.62□□□□□ -0.07
MSH5-SAPCD1-206ENST00000491552 SPIN1Q9Y657 262 aaPredicted RBP14.62□□□□□ -0.07
MSH5-SAPCD1-206ENST00000491552 AIM2O14862 343 aa14.61□□□□□ -0.07
MSH5-SAPCD1-206ENST00000491552 SERPINB7O75635 380 aa14.61□□□□□ -0.07
MSH5-SAPCD1-206ENST00000491552 SYNGR4O95473 234 aa14.61□□□□□ -0.07
MSH5-SAPCD1-206ENST00000491552 FCGR2AP12318 317 aa14.61□□□□□ -0.07
MSH5-SAPCD1-206ENST00000491552 COL8A1P27658 744 aa14.61□□□□□ -0.07
MSH5-SAPCD1-206ENST00000491552 SLC7A1P30825 629 aa14.61□□□□□ -0.07
MSH5-SAPCD1-206ENST00000491552 OPRM1P35372 400 aa14.61□□□□□ -0.07
MSH5-SAPCD1-206ENST00000491552 ACAA2P42765 397 aaKnown RBP14.61□□□□□ -0.07
MSH5-SAPCD1-206ENST00000491552 SLC1A3P43003 542 aa14.61□□□□□ -0.07
MSH5-SAPCD1-206ENST00000491552 HTR3AP46098 478 aa14.61□□□□□ -0.07
MSH5-SAPCD1-206ENST00000491552 POLR2HP52434 150 aaKnown RBP14.61□□□□□ -0.07
MSH5-SAPCD1-206ENST00000491552 CARD18P57730 90 aa14.61□□□□□ -0.07
MSH5-SAPCD1-206ENST00000491552 VMACQ2NL98 169 aa14.61□□□□□ -0.07
MSH5-SAPCD1-206ENST00000491552 HIST2H2BCQ6DN03 193 aa14.61□□□□□ -0.07
MSH5-SAPCD1-206ENST00000491552 OR2A2Q6IF42 318 aa14.61□□□□□ -0.07
MSH5-SAPCD1-206ENST00000491552 ARPINQ7Z6K5 226 aa14.61□□□□□ -0.07
MSH5-SAPCD1-206ENST00000491552 ARMC8Q8IUR7 673 aa14.61□□□□□ -0.07
MSH5-SAPCD1-206ENST00000491552 GCNT2Q8N0V5 402 aa14.61□□□□□ -0.07
MSH5-SAPCD1-206ENST00000491552 RELL2Q8NC24 303 aaPredicted RBP14.61□□□□□ -0.07
MSH5-SAPCD1-206ENST00000491552 BHLHE22Q8NFJ8 381 aaPredicted RBP14.61□□□□□ -0.07
MSH5-SAPCD1-206ENST00000491552 OSTF1Q92882 214 aa14.61□□□□□ -0.07
MSH5-SAPCD1-206ENST00000491552 SLC35B4Q969S0 331 aa14.61□□□□□ -0.07
MSH5-SAPCD1-206ENST00000491552 INTS12Q96CB8 462 aaKnown RBP14.61□□□□□ -0.07
MSH5-SAPCD1-206ENST00000491552 REXO5Q96IC2 774 aaKnown RBP14.61□□□□□ -0.07
MSH5-SAPCD1-206ENST00000491552 CCT8L2Q96SF2 557 aa14.61□□□□□ -0.07
MSH5-SAPCD1-206ENST00000491552 SFXN3Q9BWM7 321 aa14.61□□□□□ -0.07
MSH5-SAPCD1-206ENST00000491552 PRRG4Q9BZD6 226 aa14.61□□□□□ -0.07
MSH5-SAPCD1-206ENST00000491552 COQ10BQ9H8M1 238 aa14.61□□□□□ -0.07
MSH5-SAPCD1-206ENST00000491552 EFCAB1Q9HAE3 211 aa14.61□□□□□ -0.07
MSH5-SAPCD1-206ENST00000491552 TIGARQ9NQ88 270 aa14.61□□□□□ -0.07
MSH5-SAPCD1-206ENST00000491552 CHRNA9Q9UGM1 479 aa14.61□□□□□ -0.07
MSH5-SAPCD1-206ENST00000491552 FRS3O43559 492 aa14.6□□□□□ -0.07
MSH5-SAPCD1-206ENST00000491552 DCTN3O75935 186 aa14.6□□□□□ -0.07
MSH5-SAPCD1-206ENST00000491552 MFN2O95140 757 aa14.6□□□□□ -0.07
MSH5-SAPCD1-206ENST00000491552 FAM107AO95990 144 aa14.6□□□□□ -0.07
MSH5-SAPCD1-206ENST00000491552 IL18BPO95998 194 aa14.6□□□□□ -0.07
MSH5-SAPCD1-206ENST00000491552 PRG2P13727 222 aa14.6□□□□□ -0.07
MSH5-SAPCD1-206ENST00000491552 NUDT2P50583 147 aa14.6□□□□□ -0.07
MSH5-SAPCD1-206ENST00000491552 COPZ1P61923 177 aa14.6□□□□□ -0.07
MSH5-SAPCD1-206ENST00000491552 TFF3Q07654 80 aa14.6□□□□□ -0.07
MSH5-SAPCD1-206ENST00000491552 FOXF2Q12947 444 aa14.6□□□□□ -0.07
MSH5-SAPCD1-206ENST00000491552 SYT14P1Q58G82 188 aa14.6□□□□□ -0.07
MSH5-SAPCD1-206ENST00000491552 INTS11Q5TA45 600 aaKnown RBP14.6□□□□□ -0.07
MSH5-SAPCD1-206ENST00000491552 ERICH5Q6P6B1 374 aa14.6□□□□□ -0.07
MSH5-SAPCD1-206ENST00000491552 PATL1Q86TB9 770 aaKnown RBP14.6□□□□□ -0.07
MSH5-SAPCD1-206ENST00000491552 CPNE4Q96A23 557 aaPredicted RBP14.6□□□□□ -0.07
MSH5-SAPCD1-206ENST00000491552 OR5B2Q96R09 309 aa14.6□□□□□ -0.07
MSH5-SAPCD1-206ENST00000491552 GPATCH1Q9BRR8 931 aaKnown RBP14.6□□□□□ -0.07
MSH5-SAPCD1-206ENST00000491552 RSPO3Q9BXY4 272 aaPredicted RBP14.6□□□□□ -0.07
MSH5-SAPCD1-206ENST00000491552 SRXN1Q9BYN0 137 aa14.6□□□□□ -0.07
MSH5-SAPCD1-206ENST00000491552 RNF122Q9H9V4 155 aa14.6□□□□□ -0.07
MSH5-SAPCD1-206ENST00000491552 AP3M1Q9Y2T2 418 aa14.6□□□□□ -0.07
MSH5-SAPCD1-206ENST00000491552 TMED7-TICAM2A0A0A6YYA0 188 aa14.59□□□□□ -0.07
MSH5-SAPCD1-206ENST00000491552 A0A1W2PNR3 127 aa14.59□□□□□ -0.07
MSH5-SAPCD1-206ENST00000491552 A0A1W2PNV4 684 aa14.59□□□□□ -0.07
MSH5-SAPCD1-206ENST00000491552 FAM220BPB1ANY3 271 aa14.59□□□□□ -0.07
MSH5-SAPCD1-206ENST00000491552 C19orf84I3L1E1 186 aa14.59□□□□□ -0.07
MSH5-SAPCD1-206ENST00000491552 TPST1O60507 370 aa14.59□□□□□ -0.07
MSH5-SAPCD1-206ENST00000491552 SHOX2O60902 331 aaPredicted RBP14.59□□□□□ -0.07
MSH5-SAPCD1-206ENST00000491552 GCM2O75603 506 aaPredicted RBP14.59□□□□□ -0.07
MSH5-SAPCD1-206ENST00000491552 AQP8O94778 261 aa14.59□□□□□ -0.07
MSH5-SAPCD1-206ENST00000491552 OPN1SWP03999 348 aa14.59□□□□□ -0.07
MSH5-SAPCD1-206ENST00000491552 CRHP06850 196 aa14.59□□□□□ -0.07
MSH5-SAPCD1-206ENST00000491552 FKBP2P26885 142 aaKnown RBP14.59□□□□□ -0.07
MSH5-SAPCD1-206ENST00000491552 TACR3P29371 465 aa14.59□□□□□ -0.07
MSH5-SAPCD1-206ENST00000491552 AGFG1P52594 562 aaKnown RBP14.59□□□□□ -0.07
MSH5-SAPCD1-206ENST00000491552 DMTNQ08495 405 aa14.59□□□□□ -0.07
MSH5-SAPCD1-206ENST00000491552 ZNF239Q16600 458 aaKnown RBP14.59□□□□□ -0.07
MSH5-SAPCD1-206ENST00000491552 GLIPR1L2Q4G1C9 344 aa14.59□□□□□ -0.07
MSH5-SAPCD1-206ENST00000491552 EEF1A1P5Q5VTE0 462 aa14.59□□□□□ -0.07
MSH5-SAPCD1-206ENST00000491552 SP5Q6BEB4 398 aaPredicted RBP14.59□□□□□ -0.07
MSH5-SAPCD1-206ENST00000491552 WBP2NLQ6ICG8 309 aa14.59□□□□□ -0.07
MSH5-SAPCD1-206ENST00000491552 HACD2Q6Y1H2 254 aa14.59□□□□□ -0.07
MSH5-SAPCD1-206ENST00000491552 COMTD1Q86VU5 262 aa14.59□□□□□ -0.07
MSH5-SAPCD1-206ENST00000491552 ADGRG3Q86Y34 549 aa14.59□□□□□ -0.07
MSH5-SAPCD1-206ENST00000491552 CADM2Q8N3J6 435 aa14.59□□□□□ -0.07
MSH5-SAPCD1-206ENST00000491552 ANKS4BQ8N8V4 417 aa14.59□□□□□ -0.07
MSH5-SAPCD1-206ENST00000491552 ZNF583Q96ND8 569 aa14.59□□□□□ -0.07
MSH5-SAPCD1-206ENST00000491552 LRRC37BQ96QE4 947 aa14.59□□□□□ -0.07
MSH5-SAPCD1-206ENST00000491552 HOPXQ9BPY8 73 aaPredicted RBP14.59□□□□□ -0.07
MSH5-SAPCD1-206ENST00000491552 ADAM19Q9H013 955 aa14.59□□□□□ -0.07
MSH5-SAPCD1-206ENST00000491552 KLHL28Q9NXS3 571 aa14.59□□□□□ -0.07
MSH5-SAPCD1-206ENST00000491552 OSGIN1Q9UJX0 560 aa14.59□□□□□ -0.07
MSH5-SAPCD1-206ENST00000491552 SLC13A4Q9UKG4 626 aa14.59□□□□□ -0.07
MSH5-SAPCD1-206ENST00000491552 ADAM21Q9UKJ8 722 aa14.59□□□□□ -0.07
MSH5-SAPCD1-206ENST00000491552 TMED7Q9Y3B3 224 aa14.59□□□□□ -0.07
MSH5-SAPCD1-206ENST00000491552 ICE1Q9Y2F5 2266 aa14.59□□□□□ -0.07
MSH5-SAPCD1-206ENST00000491552 USP9YO00507 2555 aaPredicted RBP14.59□□□□□ -0.07
MSH5-SAPCD1-206ENST00000491552 DOCK7Q96N67 2140 aa14.59□□□□□ -0.07
MSH5-SAPCD1-206ENST00000491552 COL12A1Q99715 3063 aa14.58□□□□□ -0.07
MSH5-SAPCD1-206ENST00000491552 EEF1E1-BLOC1S5C9J1V9 151 aa14.58□□□□□ -0.08
MSH5-SAPCD1-206ENST00000491552 M0QX08 132 aa14.58□□□□□ -0.08
MSH5-SAPCD1-206ENST00000491552 EEF1E1O43324 174 aaKnown RBP14.58□□□□□ -0.08
MSH5-SAPCD1-206ENST00000491552 TFPIP10646 304 aa14.58□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 10.1 ms