RNA–Protein interactions for RNA: ENST00000491292.5

ERCC3-208, Transcript of ERCC excision repair 3, TFIIH core complex helicase subunit, humanhuman

TSL 2

Gene ERCC3, Length 4,018 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3-208ENST00000491292 B3GNT4Q9C0J1 378 aa9.13□□□□□ -0.95
ERCC3-208ENST00000491292 MCOLN1Q9GZU1 580 aa9.13□□□□□ -0.95
ERCC3-208ENST00000491292 FZD3Q9NPG1 666 aa9.13□□□□□ -0.95
ERCC3-208ENST00000491292 LYARQ9NX58 379 aaKnown RBP9.13□□□□□ -0.95
ERCC3-208ENST00000491292 CALML5Q9NZT1 146 aa9.13□□□□□ -0.95
ERCC3-208ENST00000491292 ANKRD36A6QL64 1941 aa9.13□□□□□ -0.95
ERCC3-208ENST00000491292 TBC1D3BA6NDS4 549 aa9.13□□□□□ -0.95
ERCC3-208ENST00000491292 ARRDC5A6NEK1 342 aa9.13□□□□□ -0.95
ERCC3-208ENST00000491292 EEF1E1-BLOC1S5C9J1V9 151 aa9.13□□□□□ -0.95
ERCC3-208ENST00000491292 EMC8O43402 210 aa9.13□□□□□ -0.95
ERCC3-208ENST00000491292 RLN2P04090 185 aa9.13□□□□□ -0.95
ERCC3-208ENST00000491292 ASGR2P07307 311 aa9.13□□□□□ -0.95
ERCC3-208ENST00000491292 C6P13671 934 aa9.13□□□□□ -0.95
ERCC3-208ENST00000491292 TAS2R43P59537 309 aa9.13□□□□□ -0.95
ERCC3-208ENST00000491292 SEC61A1P61619 476 aaKnown RBP9.13□□□□□ -0.95
ERCC3-208ENST00000491292 CDKN3Q16667 212 aa9.13□□□□□ -0.95
ERCC3-208ENST00000491292 CAMKMTQ7Z624 323 aa9.13□□□□□ -0.95
ERCC3-208ENST00000491292 ANKRD53Q8N9V6 530 aa9.13□□□□□ -0.95
ERCC3-208ENST00000491292 GATSQ8NAP1 163 aa9.13□□□□□ -0.95
ERCC3-208ENST00000491292 TMEM239Q8WW34 195 aa9.13□□□□□ -0.95
ERCC3-208ENST00000491292 MARC2Q969Z3 335 aa9.13□□□□□ -0.95
ERCC3-208ENST00000491292 BPIFA2Q96DR5 249 aa9.13□□□□□ -0.95
ERCC3-208ENST00000491292 TNFRSF13CQ96RJ3 184 aa9.13□□□□□ -0.95
ERCC3-208ENST00000491292 RSPH9Q9H1X1 276 aaPredicted RBP9.13□□□□□ -0.95
ERCC3-208ENST00000491292 FANCFQ9NPI8 374 aa9.13□□□□□ -0.95
ERCC3-208ENST00000491292 PTTG3PQ9NZH4 202 aa9.13□□□□□ -0.95
ERCC3-208ENST00000491292 NTMQ9P121 344 aa9.13□□□□□ -0.95
ERCC3-208ENST00000491292 DICER1Q9UPY3 1922 aaKnown RBP9.12□□□□□ -0.95
ERCC3-208ENST00000491292 TSC2P49815 1807 aa9.12□□□□□ -0.95
ERCC3-208ENST00000491292 WASH3PC4AMC7 463 aa9.12□□□□□ -0.95
ERCC3-208ENST00000491292 CCSO14618 274 aa9.12□□□□□ -0.95
ERCC3-208ENST00000491292 DOK2O60496 412 aa9.12□□□□□ -0.95
ERCC3-208ENST00000491292 B4GALT2O60909 372 aa9.12□□□□□ -0.95
ERCC3-208ENST00000491292 ITGA10O75578 1167 aa9.12□□□□□ -0.95
ERCC3-208ENST00000491292 RECKO95980 971 aa9.12□□□□□ -0.95
ERCC3-208ENST00000491292 IGF2P01344 180 aa9.12□□□□□ -0.95
ERCC3-208ENST00000491292 AQP2P41181 271 aa9.12□□□□□ -0.95
ERCC3-208ENST00000491292 RAP2BP61225 183 aa9.12□□□□□ -0.95
ERCC3-208ENST00000491292 DEFB134Q4QY38 66 aa9.12□□□□□ -0.95
ERCC3-208ENST00000491292 ZNF805Q5CZA5 627 aa9.12□□□□□ -0.95
ERCC3-208ENST00000491292 LRFN4Q6PJG9 635 aa9.12□□□□□ -0.95
ERCC3-208ENST00000491292 ZNF546Q86UE3 836 aa9.12□□□□□ -0.95
ERCC3-208ENST00000491292 SPAG16Q8N0X2 631 aa9.12□□□□□ -0.95
ERCC3-208ENST00000491292 FAM181AQ8N9Y4 354 aa9.12□□□□□ -0.95
ERCC3-208ENST00000491292 THEM6Q8WUY1 208 aa9.12□□□□□ -0.95
ERCC3-208ENST00000491292 TMEM231Q9H6L2 316 aa9.12□□□□□ -0.95
ERCC3-208ENST00000491292 IER3IP1Q9Y5U9 82 aa9.12□□□□□ -0.95
ERCC3-208ENST00000491292 CHD5Q8TDI0 1954 aa9.12□□□□□ -0.95
ERCC3-208ENST00000491292 DSPPQ9NZW4 1301 aa9.12□□□□□ -0.95
ERCC3-208ENST00000491292 PRAMEF27A3QJZ7 478 aa9.12□□□□□ -0.95
ERCC3-208ENST00000491292 F8W036 122 aa9.12□□□□□ -0.95
ERCC3-208ENST00000491292 ATP1B1P05026 303 aa9.12□□□□□ -0.95
ERCC3-208ENST00000491292 ADRB1P08588 477 aa9.12□□□□□ -0.95
ERCC3-208ENST00000491292 HOXD4P09016 255 aaPredicted RBP9.12□□□□□ -0.95
ERCC3-208ENST00000491292 CXCL2P19875 107 aa9.12□□□□□ -0.95
ERCC3-208ENST00000491292 ITPKBP27987 946 aa9.12□□□□□ -0.95
ERCC3-208ENST00000491292 ART1P52961 327 aa9.12□□□□□ -0.95
ERCC3-208ENST00000491292 DLX5P56178 289 aa9.12□□□□□ -0.95
ERCC3-208ENST00000491292 BLOC1S1P78537 153 aa9.12□□□□□ -0.95
ERCC3-208ENST00000491292 FOXK2Q01167 660 aa9.12□□□□□ -0.95
ERCC3-208ENST00000491292 ZNF155Q12901 538 aaPredicted RBP9.12□□□□□ -0.95
ERCC3-208ENST00000491292 SQSTM1Q13501 440 aa9.12□□□□□ -0.95
ERCC3-208ENST00000491292 UNQ6126/PRO20091Q6UXV3 157 aa9.12□□□□□ -0.95
ERCC3-208ENST00000491292 ZNF620Q6ZNG0 422 aa9.12□□□□□ -0.95
ERCC3-208ENST00000491292 KRT77Q7Z794 578 aa9.12□□□□□ -0.95
ERCC3-208ENST00000491292 PARGQ86W56 976 aa9.12□□□□□ -0.95
ERCC3-208ENST00000491292 ACOT4Q8N9L9 421 aa9.12□□□□□ -0.95
ERCC3-208ENST00000491292 WNT2BQ93097 391 aa9.12□□□□□ -0.95
ERCC3-208ENST00000491292 IGSF21Q96ID5 467 aa9.12□□□□□ -0.95
ERCC3-208ENST00000491292 PTCHD1Q96NR3 888 aa9.12□□□□□ -0.95
ERCC3-208ENST00000491292 C1QTNF2Q9BXJ5 285 aa9.12□□□□□ -0.95
ERCC3-208ENST00000491292 MS4A8Q9BY19 250 aa9.12□□□□□ -0.95
ERCC3-208ENST00000491292 LIN7BQ9HAP6 207 aa9.12□□□□□ -0.95
ERCC3-208ENST00000491292 C14orf105Q9NVL8 296 aa9.12□□□□□ -0.95
ERCC3-208ENST00000491292 SLCO1C1Q9NYB5 712 aa9.12□□□□□ -0.95
ERCC3-208ENST00000491292 CPNE7Q9UBL6 633 aa9.12□□□□□ -0.95
ERCC3-208ENST00000491292 CAMK2AQ9UQM7 478 aa9.12□□□□□ -0.95
ERCC3-208ENST00000491292 OR1A2Q9Y585 309 aa9.12□□□□□ -0.95
ERCC3-208ENST00000491292 IDSB3KWA1 339 aa9.12□□□□□ -0.95
ERCC3-208ENST00000491292 HPGDP15428 266 aa9.12□□□□□ -0.95
ERCC3-208ENST00000491292 ATP5A1P25705 553 aaKnown RBP9.12□□□□□ -0.95
ERCC3-208ENST00000491292 DDX6P26196 483 aaKnown RBP eCLIP9.12□□□□□ -0.952e-9■■■■□ 25.8
ERCC3-208ENST00000491292 RPS27P42677 84 aaKnown RBP9.12□□□□□ -0.95
ERCC3-208ENST00000491292 LUMP51884 338 aaPredicted RBP9.12□□□□□ -0.95
ERCC3-208ENST00000491292 KCNAB1Q14722 419 aa9.12□□□□□ -0.95
ERCC3-208ENST00000491292 PUS10Q3MIT2 529 aaKnown RBP9.12□□□□□ -0.95
ERCC3-208ENST00000491292 GAREM2Q75VX8 874 aa9.12□□□□□ -0.95
ERCC3-208ENST00000491292 PARS2Q7L3T8 475 aaKnown RBP9.12□□□□□ -0.95
ERCC3-208ENST00000491292 CCDC36Q8IYA8 594 aa9.12□□□□□ -0.95
ERCC3-208ENST00000491292 OR4E2Q8NGC2 313 aa9.12□□□□□ -0.95
ERCC3-208ENST00000491292 KCTD12Q96CX2 325 aaKnown RBP9.12□□□□□ -0.95
ERCC3-208ENST00000491292 ELP4Q96EB1 424 aa9.12□□□□□ -0.95
ERCC3-208ENST00000491292 MRPL48Q96GC5 212 aaKnown RBP9.12□□□□□ -0.95
ERCC3-208ENST00000491292 ENKD1Q9H0I2 346 aa9.12□□□□□ -0.95
ERCC3-208ENST00000491292 MAN2C1Q9NTJ4 1040 aa9.12□□□□□ -0.95
ERCC3-208ENST00000491292 MBD2Q9UBB5 411 aa9.12□□□□□ -0.95
ERCC3-208ENST00000491292 GPR160Q9UJ42 338 aa9.12□□□□□ -0.95
ERCC3-208ENST00000491292 PCDHGA9Q9Y5G4 932 aaKnown RBP9.12□□□□□ -0.95
ERCC3-208ENST00000491292 RTTNQ86VV8 2226 aa9.11□□□□□ -0.95
ERCC3-208ENST00000491292 TVP23AA6NH52 213 aa9.11□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms