RNA–Protein interactions for RNA: ENST00000490677.1

HOXB3-211, Transcript of homeobox B3, humanhuman

TSL 1 (best) BASIC

Gene HOXB3, Length 1,109 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXB3-211ENST00000490677 THAP1Q9NVV9 213 aa24.68■■□□□ 1.54
HOXB3-211ENST00000490677 GOLGA8QA0A0J9YX86 632 aa24.67■■□□□ 1.54
HOXB3-211ENST00000490677 GOLGA8OA6NCC3 632 aa24.67■■□□□ 1.54
HOXB3-211ENST00000490677 CCDC154A6NI56 674 aa24.67■■□□□ 1.54
HOXB3-211ENST00000490677 GOLGA8NF8WBI6 632 aa24.67■■□□□ 1.54
HOXB3-211ENST00000490677 CHI3L1P36222 383 aaPredicted RBP24.67■■□□□ 1.54
HOXB3-211ENST00000490677 OR3A2P47893 321 aa24.67■■□□□ 1.54
HOXB3-211ENST00000490677 DIO1P49895 249 aa24.67■■□□□ 1.54
HOXB3-211ENST00000490677 MERTKQ12866 999 aa24.67■■□□□ 1.54
HOXB3-211ENST00000490677 MAPK11Q15759 364 aa24.67■■□□□ 1.54
HOXB3-211ENST00000490677 SYPL1Q16563 259 aa24.67■■□□□ 1.54
HOXB3-211ENST00000490677 SYT14P1Q58G82 188 aa24.67■■□□□ 1.54
HOXB3-211ENST00000490677 MAVSQ7Z434 540 aa24.67■■□□□ 1.54
HOXB3-211ENST00000490677 ANKFN1Q8N957 763 aa24.67■■□□□ 1.54
HOXB3-211ENST00000490677 STEAP2Q8NFT2 490 aa24.67■■□□□ 1.54
HOXB3-211ENST00000490677 TMEM234Q8WY98 164 aa24.67■■□□□ 1.54
HOXB3-211ENST00000490677 MAELQ96JY0 434 aaKnown RBP24.67■■□□□ 1.54
HOXB3-211ENST00000490677 EXOSC3Q9NQT5 275 aaKnown RBP24.67■■□□□ 1.54
HOXB3-211ENST00000490677 SLC6A13Q9NSD5 602 aa24.67■■□□□ 1.54
HOXB3-211ENST00000490677 KLHL9Q9P2J3 617 aa24.67■■□□□ 1.54
HOXB3-211ENST00000490677 CHRM4P08173 479 aa24.66■■□□□ 1.54
HOXB3-211ENST00000490677 RPS4Y1P22090 263 aaKnown RBP24.66■■□□□ 1.54
HOXB3-211ENST00000490677 NR1H2P55055 460 aa24.66■■□□□ 1.54
HOXB3-211ENST00000490677 KCNJ10P78508 379 aa24.66■■□□□ 1.54
HOXB3-211ENST00000490677 COX20Q5RI15 118 aa24.66■■□□□ 1.54
HOXB3-211ENST00000490677 ABLIM2Q6H8Q1 611 aa24.66■■□□□ 1.54
HOXB3-211ENST00000490677 TMPPEQ6ZT21 453 aa24.66■■□□□ 1.54
HOXB3-211ENST00000490677 CNOT9Q92600 299 aaKnown RBP24.66■■□□□ 1.54
HOXB3-211ENST00000490677 TLCD1Q96CP7 247 aa24.66■■□□□ 1.54
HOXB3-211ENST00000490677 TACO1Q9BSH4 297 aaKnown RBP24.66■■□□□ 1.54
HOXB3-211ENST00000490677 HDHD5Q9BXW7 423 aa24.66■■□□□ 1.54
HOXB3-211ENST00000490677 CTPS2Q9NRF8 586 aa24.66■■□□□ 1.54
HOXB3-211ENST00000490677 PRSS50Q9UI38 385 aa24.66■■□□□ 1.54
HOXB3-211ENST00000490677 ADAP00813 363 aa24.65■■□□□ 1.54
HOXB3-211ENST00000490677 MVDP53602 400 aa24.65■■□□□ 1.54
HOXB3-211ENST00000490677 RASGEF1BQ0VAM2 473 aa24.65■■□□□ 1.54
HOXB3-211ENST00000490677 TAB1Q15750 504 aa24.65■■□□□ 1.54
HOXB3-211ENST00000490677 PRSS57Q6UWY2 283 aa24.65■■□□□ 1.54
HOXB3-211ENST00000490677 BIVMQ86UB2 503 aa24.65■■□□□ 1.54
HOXB3-211ENST00000490677 CIARTQ8N365 385 aaPredicted RBP24.65■■□□□ 1.54
HOXB3-211ENST00000490677 LILRB1Q8NHL6 650 aaPredicted RBP24.65■■□□□ 1.54
HOXB3-211ENST00000490677 RAB3IL1Q8TBN0 382 aa24.65■■□□□ 1.54
HOXB3-211ENST00000490677 MGARPQ8TDB4 240 aa24.65■■□□□ 1.54
HOXB3-211ENST00000490677 ARL5BQ96KC2 179 aa24.65■■□□□ 1.54
HOXB3-211ENST00000490677 TRNT1Q96Q11 434 aaKnown RBP24.65■■□□□ 1.54
HOXB3-211ENST00000490677 OR52E6Q96RD3 313 aa24.65■■□□□ 1.54
HOXB3-211ENST00000490677 PANX1Q96RD7 426 aa24.65■■□□□ 1.54
HOXB3-211ENST00000490677 TLN2Q9Y4G6 2542 aa24.65■■□□□ 1.54
HOXB3-211ENST00000490677 FN1P02751 2386 aaKnown RBP24.65■■□□□ 1.54
HOXB3-211ENST00000490677 ZNF724A8MTY0 619 aa24.64■■□□□ 1.54
HOXB3-211ENST00000490677 ARHGEF9O43307 516 aa24.64■■□□□ 1.54
HOXB3-211ENST00000490677 GSNP06396 782 aa24.64■■□□□ 1.54
HOXB3-211ENST00000490677 FESP07332 822 aa24.64■■□□□ 1.54
HOXB3-211ENST00000490677 INHBBP09529 407 aa24.64■■□□□ 1.54
HOXB3-211ENST00000490677 PAX1P15863 534 aa24.64■■□□□ 1.54
HOXB3-211ENST00000490677 APOBEC1P41238 236 aaKnown RBP24.64■■□□□ 1.54
HOXB3-211ENST00000490677 P2RY6Q15077 328 aa24.64■■□□□ 1.54
HOXB3-211ENST00000490677 GPAT3Q53EU6 434 aa24.64■■□□□ 1.54
HOXB3-211ENST00000490677 Q6ZT83 130 aa24.64■■□□□ 1.54
HOXB3-211ENST00000490677 ATG4DQ86TL0 474 aaPredicted RBP24.64■■□□□ 1.54
HOXB3-211ENST00000490677 ADGRG3Q86Y34 549 aa24.64■■□□□ 1.54
HOXB3-211ENST00000490677 SLC25A43Q8WUT9 341 aaPredicted RBP24.64■■□□□ 1.54
HOXB3-211ENST00000490677 GSX2Q9BZM3 304 aa24.64■■□□□ 1.54
HOXB3-211ENST00000490677 IGKV3D-15A0A087WSY6 115 aa24.63■■□□□ 1.53
HOXB3-211ENST00000490677 AGAP5A6NIR3 686 aa24.63■■□□□ 1.53
HOXB3-211ENST00000490677 AP3D1O14617 1153 aa24.63■■□□□ 1.53
HOXB3-211ENST00000490677 RYKP34925 604 aa24.63■■□□□ 1.53
HOXB3-211ENST00000490677 SLC9B1Q4ZJI4 515 aa24.63■■□□□ 1.53
HOXB3-211ENST00000490677 GRINAQ7Z429 371 aa24.63■■□□□ 1.53
HOXB3-211ENST00000490677 P3H2Q8IVL5 708 aa24.63■■□□□ 1.53
HOXB3-211ENST00000490677 ARL8AQ96BM9 186 aa24.63■■□□□ 1.53
HOXB3-211ENST00000490677 ZNF775Q96BV0 537 aaPredicted RBP24.63■■□□□ 1.53
HOXB3-211ENST00000490677 PERPQ96FX8 193 aa24.63■■□□□ 1.53
HOXB3-211ENST00000490677 SERINC1Q9NRX5 453 aa24.63■■□□□ 1.53
HOXB3-211ENST00000490677 ST6GALNAC1Q9NSC7 600 aaPredicted RBP24.63■■□□□ 1.53
HOXB3-211ENST00000490677 CHRNA9Q9UGM1 479 aa24.63■■□□□ 1.53
HOXB3-211ENST00000490677 LIPT1Q9Y234 373 aa24.63■■□□□ 1.53
HOXB3-211ENST00000490677 PLCE1Q9P212 2302 aa24.63■■□□□ 1.53
HOXB3-211ENST00000490677 TRPC5OSA6NMA1 111 aa24.62■■□□□ 1.53
HOXB3-211ENST00000490677 ZNF716A6NP11 495 aa24.62■■□□□ 1.53
HOXB3-211ENST00000490677 SULT2B1O00204 365 aa24.62■■□□□ 1.53
HOXB3-211ENST00000490677 HS3ST1O14792 307 aa24.62■■□□□ 1.53
HOXB3-211ENST00000490677 KITP10721 976 aa24.62■■□□□ 1.53
HOXB3-211ENST00000490677 NTF4P34130 210 aa24.62■■□□□ 1.53
HOXB3-211ENST00000490677 MAGOHP61326 146 aaKnown RBP24.62■■□□□ 1.53
HOXB3-211ENST00000490677 ITGADQ13349 1161 aa24.62■■□□□ 1.53
HOXB3-211ENST00000490677 PDCD4Q53EL6 469 aaKnown RBP24.62■■□□□ 1.53
HOXB3-211ENST00000490677 BEND6Q5SZJ8 279 aaPredicted RBP24.62■■□□□ 1.53
HOXB3-211ENST00000490677 ADAM5Q6NVV9 412 aa24.62■■□□□ 1.53
HOXB3-211ENST00000490677 LRRC74BQ6ZQY2 392 aa24.62■■□□□ 1.53
HOXB3-211ENST00000490677 ZC3HAV1Q7Z2W4 902 aaKnown RBP24.62■■□□□ 1.53
HOXB3-211ENST00000490677 ZNF611Q8N823 705 aa24.62■■□□□ 1.53
HOXB3-211ENST00000490677 COX4I2Q96KJ9 171 aa24.62■■□□□ 1.53
HOXB3-211ENST00000490677 OR11A1Q9GZK7 315 aa24.62■■□□□ 1.53
HOXB3-211ENST00000490677 TMBIM4Q9HC24 238 aa24.62■■□□□ 1.53
HOXB3-211ENST00000490677 ZNF701Q9NV72 531 aaPredicted RBP24.62■■□□□ 1.53
HOXB3-211ENST00000490677 COX5AP20674 150 aa24.61■■□□□ 1.53
HOXB3-211ENST00000490677 PTH2RP49190 550 aa24.61■■□□□ 1.53
HOXB3-211ENST00000490677 TXNL4AP83876 142 aaKnown RBP24.61■■□□□ 1.53
HOXB3-211ENST00000490677 NCMAPQ5T1S8 102 aa24.61■■□□□ 1.53
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms