RNA–Protein interactions for RNA: ENST00000490283.1

SEC13-218, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 2

Gene SEC13, Length 740 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-218ENST00000490283 INTS9Q9NV88 658 aaKnown RBP15.57■□□□□ 0.08
SEC13-218ENST00000490283 C6orf203Q9P0P8 240 aaPredicted RBP15.57■□□□□ 0.08
SEC13-218ENST00000490283 CHRNA9Q9UGM1 479 aa15.57■□□□□ 0.08
SEC13-218ENST00000490283 PRAMEF27A3QJZ7 478 aa15.56■□□□□ 0.08
SEC13-218ENST00000490283 SULT2B1O00204 365 aa15.56■□□□□ 0.08
SEC13-218ENST00000490283 YES1P07947 543 aa15.56■□□□□ 0.08
SEC13-218ENST00000490283 DSTNP60981 165 aa15.56■□□□□ 0.08
SEC13-218ENST00000490283 ANKRD34AQ69YU3 496 aa15.56■□□□□ 0.08
SEC13-218ENST00000490283 TUSC5Q8IXB3 177 aa15.56■□□□□ 0.08
SEC13-218ENST00000490283 ZNF440Q8IYI8 595 aa15.56■□□□□ 0.08
SEC13-218ENST00000490283 VPS33AQ96AX1 596 aa15.56■□□□□ 0.08
SEC13-218ENST00000490283 ZG16BQ96DA0 208 aa15.56■□□□□ 0.08
SEC13-218ENST00000490283 ALPK1Q96QP1 1244 aa15.56■□□□□ 0.08
SEC13-218ENST00000490283 CCDC28BQ9BUN5 200 aa15.56■□□□□ 0.08
SEC13-218ENST00000490283 PLEKHF2Q9H8W4 249 aa15.56■□□□□ 0.08
SEC13-218ENST00000490283 VIPAS39Q9H9C1 493 aa15.56■□□□□ 0.08
SEC13-218ENST00000490283 SLCO1B3Q9NPD5 702 aa15.56■□□□□ 0.08
SEC13-218ENST00000490283 GPR52Q9Y2T5 361 aa15.56■□□□□ 0.08
SEC13-218ENST00000490283 IGHV3-15A0A0B4J1V0 119 aa15.55■□□□□ 0.08
SEC13-218ENST00000490283 CLDN24A6NM45 220 aa15.55■□□□□ 0.08
SEC13-218ENST00000490283 C1QCP02747 245 aa15.55■□□□□ 0.08
SEC13-218ENST00000490283 BCHEP06276 602 aa15.55■□□□□ 0.08
SEC13-218ENST00000490283 ETFAP13804 333 aa15.55■□□□□ 0.08
SEC13-218ENST00000490283 NID1P14543 1247 aa15.55■□□□□ 0.08
SEC13-218ENST00000490283 IDH2P48735 452 aaKnown RBP15.55■□□□□ 0.08
SEC13-218ENST00000490283 DIO1P49895 249 aa15.55■□□□□ 0.08
SEC13-218ENST00000490283 PPP2R2AP63151 447 aa15.55■□□□□ 0.08
SEC13-218ENST00000490283 IRX1P78414 480 aaPredicted RBP15.55■□□□□ 0.08
SEC13-218ENST00000490283 RASGEF1BQ0VAM2 473 aa15.55■□□□□ 0.08
SEC13-218ENST00000490283 LIN52Q52LA3 116 aa15.55■□□□□ 0.08
SEC13-218ENST00000490283 STAC2Q6ZMT1 411 aa15.55■□□□□ 0.08
SEC13-218ENST00000490283 TMPPEQ6ZT21 453 aa15.55■□□□□ 0.08
SEC13-218ENST00000490283 STEAP2Q8NFT2 490 aa15.55■□□□□ 0.08
SEC13-218ENST00000490283 CNOT9Q92600 299 aaKnown RBP15.55■□□□□ 0.08
SEC13-218ENST00000490283 ZNF524Q96C55 264 aa15.55■□□□□ 0.08
SEC13-218ENST00000490283 MBD6Q96DN6 1003 aa15.55■□□□□ 0.08
SEC13-218ENST00000490283 CCDC106Q9BWC9 280 aa15.55■□□□□ 0.08
SEC13-218ENST00000490283 HDHD5Q9BXW7 423 aa15.55■□□□□ 0.08
SEC13-218ENST00000490283 OR10A4Q9H209 315 aa15.55■□□□□ 0.08
SEC13-218ENST00000490283 ARMC7Q9H6L4 198 aa15.55■□□□□ 0.08
SEC13-218ENST00000490283 CTPS2Q9NRF8 586 aa15.55■□□□□ 0.08
SEC13-218ENST00000490283 HDGFL3Q9Y3E1 203 aa15.55■□□□□ 0.08
SEC13-218ENST00000490283 MPDZO75970 2070 aa15.55■□□□□ 0.08
SEC13-218ENST00000490283 CFAP73A6NFT4 308 aa15.54■□□□□ 0.08
SEC13-218ENST00000490283 BCAS1O75363 584 aaPredicted RBP15.54■□□□□ 0.08
SEC13-218ENST00000490283 FESP07332 822 aa15.54■□□□□ 0.08
SEC13-218ENST00000490283 PSMB1P20618 241 aaKnown RBP15.54■□□□□ 0.08
SEC13-218ENST00000490283 RPS4Y1P22090 263 aaKnown RBP15.54■□□□□ 0.08
SEC13-218ENST00000490283 IL32P24001 234 aa15.54■□□□□ 0.08
SEC13-218ENST00000490283 MRPL19P49406 292 aaKnown RBP15.54■□□□□ 0.08
SEC13-218ENST00000490283 CLK1P49759 484 aaKnown RBP15.54■□□□□ 0.08
SEC13-218ENST00000490283 IDH3AP50213 366 aa15.54■□□□□ 0.08
SEC13-218ENST00000490283 AQP5P55064 265 aa15.54■□□□□ 0.08
SEC13-218ENST00000490283 LARS2Q15031 903 aaKnown RBP15.54■□□□□ 0.08
SEC13-218ENST00000490283 ZSWIM7Q19AV6 140 aa15.54■□□□□ 0.08
SEC13-218ENST00000490283 BEX5Q5H9J7 111 aa15.54■□□□□ 0.08
SEC13-218ENST00000490283 MRPL2Q5T653 305 aaKnown RBP15.54■□□□□ 0.08
SEC13-218ENST00000490283 TFAP2EQ6VUC0 442 aa15.54■□□□□ 0.08
SEC13-218ENST00000490283 DDIT4LQ96D03 193 aa15.54■□□□□ 0.08
SEC13-218ENST00000490283 ACTR6Q9GZN1 396 aa15.54■□□□□ 0.08
SEC13-218ENST00000490283 CXXC4Q9H2H0 198 aa15.54■□□□□ 0.08
SEC13-218ENST00000490283 BCO1Q9HAY6 547 aa15.54■□□□□ 0.08
SEC13-218ENST00000490283 SLC6A13Q9NSD5 602 aa15.54■□□□□ 0.08
SEC13-218ENST00000490283 EMC3Q9P0I2 261 aa15.54■□□□□ 0.08
SEC13-218ENST00000490283 ZNF232Q9UNY5 417 aa15.54■□□□□ 0.08
SEC13-218ENST00000490283 DEFB108AA8MXU0 73 aa15.53■□□□□ 0.08
SEC13-218ENST00000490283 SMAD9O15198 467 aaKnown RBP15.53■□□□□ 0.08
SEC13-218ENST00000490283 CYTIPO60759 359 aa15.53■□□□□ 0.08
SEC13-218ENST00000490283 ATE1O95260 518 aa15.53■□□□□ 0.08
SEC13-218ENST00000490283 POLR2HP52434 150 aaKnown RBP15.53■□□□□ 0.08
SEC13-218ENST00000490283 COPZ1P61923 177 aa15.53■□□□□ 0.08
SEC13-218ENST00000490283 DEFB113Q30KQ7 82 aa15.53■□□□□ 0.08
SEC13-218ENST00000490283 GTDC1Q4AE62 458 aa15.53■□□□□ 0.08
SEC13-218ENST00000490283 SLC2A7Q6PXP3 512 aa15.53■□□□□ 0.08
SEC13-218ENST00000490283 NUFIP2Q7Z417 695 aaKnown RBP15.53■□□□□ 0.08
SEC13-218ENST00000490283 MTDHQ86UE4 582 aaKnown RBP15.53■□□□□ 0.08
SEC13-218ENST00000490283 OR52P1PQ8NH57 321 aa15.53■□□□□ 0.08
SEC13-218ENST00000490283 GTF2H4Q92759 462 aa15.53■□□□□ 0.08
SEC13-218ENST00000490283 AURKBQ96GD4 344 aaPredicted RBP15.53■□□□□ 0.08
SEC13-218ENST00000490283 PSD2Q9BQI7 771 aa15.53■□□□□ 0.08
SEC13-218ENST00000490283 EBF4Q9BQW3 602 aa15.53■□□□□ 0.08
SEC13-218ENST00000490283 CCDC167Q9P0B6 97 aa15.53■□□□□ 0.08
SEC13-218ENST00000490283 PRDM4Q9UKN5 801 aa15.53■□□□□ 0.08
SEC13-218ENST00000490283 F8P00451 2351 aa15.52■□□□□ 0.08
SEC13-218ENST00000490283 A0A0G2JPF8 293 aa15.52■□□□□ 0.08
SEC13-218ENST00000490283 HNRNPCL2B2RXH8 293 aa15.52■□□□□ 0.08
SEC13-218ENST00000490283 HNRNPCL3B7ZW38 293 aa15.52■□□□□ 0.08
SEC13-218ENST00000490283 C5orf58C9J3I9 102 aa15.52■□□□□ 0.08
SEC13-218ENST00000490283 CLIC1O00299 241 aa15.52■□□□□ 0.08
SEC13-218ENST00000490283 NR5A2O00482 541 aa15.52■□□□□ 0.08
SEC13-218ENST00000490283 FAAHO00519 579 aa15.52■□□□□ 0.08
SEC13-218ENST00000490283 AP3D1O14617 1153 aa15.52■□□□□ 0.08
SEC13-218ENST00000490283 DNPH1O43598 174 aa15.52■□□□□ 0.08
SEC13-218ENST00000490283 HNRNPCL1O60812 293 aaKnown RBP15.52■□□□□ 0.08
SEC13-218ENST00000490283 PMS2P2O95744 297 aa15.52■□□□□ 0.08
SEC13-218ENST00000490283 TFPTP0C1Z6 253 aa15.52■□□□□ 0.08
SEC13-218ENST00000490283 HNRNPCL4P0DMR1 293 aa15.52■□□□□ 0.08
SEC13-218ENST00000490283 CCNA2P20248 432 aa15.52■□□□□ 0.08
SEC13-218ENST00000490283 FPR1P21462 350 aa15.52■□□□□ 0.08
SEC13-218ENST00000490283 PPIBP23284 216 aaKnown RBP15.52■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms