RNA–Protein interactions for RNA: ENST00000489921.1

TNFRSF1B-202, Transcript of TNF receptor superfamily member 1B, humanhuman

TSL 3

Gene TNFRSF1B, Length 409 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1B-202ENST00000489921 CNOT4O95628 575 aaKnown RBP17.19■□□□□ 0.34
TNFRSF1B-202ENST00000489921 LBPP18428 481 aa17.19■□□□□ 0.34
TNFRSF1B-202ENST00000489921 PGCP20142 388 aa17.19■□□□□ 0.34
TNFRSF1B-202ENST00000489921 DIO1P49895 249 aa17.19■□□□□ 0.34
TNFRSF1B-202ENST00000489921 MERTKQ12866 999 aa17.19■□□□□ 0.34
TNFRSF1B-202ENST00000489921 OGFOD2Q6N063 350 aa17.19■□□□□ 0.34
TNFRSF1B-202ENST00000489921 ALKBH2Q6NS38 261 aa17.19■□□□□ 0.34
TNFRSF1B-202ENST00000489921 TMPPEQ6ZT21 453 aa17.19■□□□□ 0.34
TNFRSF1B-202ENST00000489921 HMGN2P46Q86SG4 172 aa17.19■□□□□ 0.34
TNFRSF1B-202ENST00000489921 ZNF619Q8N2I2 560 aa17.19■□□□□ 0.34
TNFRSF1B-202ENST00000489921 HSD17B8Q92506 261 aa17.19■□□□□ 0.34
TNFRSF1B-202ENST00000489921 NEUROG1Q92886 237 aa17.19■□□□□ 0.34
TNFRSF1B-202ENST00000489921 CCDC115Q96NT0 180 aa17.19■□□□□ 0.34
TNFRSF1B-202ENST00000489921 TACO1Q9BSH4 297 aaKnown RBP17.19■□□□□ 0.34
TNFRSF1B-202ENST00000489921 POLE3Q9NRF9 147 aa17.19■□□□□ 0.34
TNFRSF1B-202ENST00000489921 RAB21Q9UL25 225 aa17.19■□□□□ 0.34
TNFRSF1B-202ENST00000489921 WDR45Q9Y484 360 aa17.19■□□□□ 0.34
TNFRSF1B-202ENST00000489921 DPRXA6NFQ7 191 aa17.18■□□□□ 0.34
TNFRSF1B-202ENST00000489921 ZNF724A8MTY0 619 aa17.18■□□□□ 0.34
TNFRSF1B-202ENST00000489921 OVOL3O00110 214 aa17.18■□□□□ 0.34
TNFRSF1B-202ENST00000489921 SDHDO14521 159 aa17.18■□□□□ 0.34
TNFRSF1B-202ENST00000489921 SMAD7O15105 426 aaKnown RBP17.18■□□□□ 0.34
TNFRSF1B-202ENST00000489921 AGR2O95994 175 aa17.18■□□□□ 0.34
TNFRSF1B-202ENST00000489921 DANCRP0C864 163 aa17.18■□□□□ 0.34
TNFRSF1B-202ENST00000489921 NTF4P34130 210 aa17.18■□□□□ 0.34
TNFRSF1B-202ENST00000489921 UFM1P61960 85 aa17.18■□□□□ 0.34
TNFRSF1B-202ENST00000489921 CHRNEQ04844 493 aa17.18■□□□□ 0.34
TNFRSF1B-202ENST00000489921 BST1Q10588 318 aa17.18■□□□□ 0.34
TNFRSF1B-202ENST00000489921 STX3Q13277 289 aa17.18■□□□□ 0.34
TNFRSF1B-202ENST00000489921 FAM174BQ3ZCQ3 159 aa17.18■□□□□ 0.34
TNFRSF1B-202ENST00000489921 SYT14P1Q58G82 188 aa17.18■□□□□ 0.34
TNFRSF1B-202ENST00000489921 ZC3HAV1Q7Z2W4 902 aaKnown RBP17.18■□□□□ 0.34
TNFRSF1B-202ENST00000489921 PIWIL2Q8TC59 973 aaKnown RBP17.18■□□□□ 0.34
TNFRSF1B-202ENST00000489921 TMEM171Q8WVE6 324 aa17.18■□□□□ 0.34
TNFRSF1B-202ENST00000489921 OIT3Q8WWZ8 545 aa17.18■□□□□ 0.34
TNFRSF1B-202ENST00000489921 KISS1RQ969F8 398 aaPredicted RBP17.18■□□□□ 0.34
TNFRSF1B-202ENST00000489921 CTPS2Q9NRF8 586 aa17.18■□□□□ 0.34
TNFRSF1B-202ENST00000489921 BTNL2Q9UIR0 455 aa17.18■□□□□ 0.34
TNFRSF1B-202ENST00000489921 IGKV3D-15A0A087WSY6 115 aa17.17■□□□□ 0.34
TNFRSF1B-202ENST00000489921 ZNF716A6NP11 495 aa17.17■□□□□ 0.34
TNFRSF1B-202ENST00000489921 E9PBE3 544 aa17.17■□□□□ 0.34
TNFRSF1B-202ENST00000489921 TMCC2O75069 709 aa17.17■□□□□ 0.34
TNFRSF1B-202ENST00000489921 FESP07332 822 aa17.17■□□□□ 0.34
TNFRSF1B-202ENST00000489921 SOD3P08294 240 aa17.17■□□□□ 0.34
TNFRSF1B-202ENST00000489921 IGHV1-2P23083 117 aa17.17■□□□□ 0.34
TNFRSF1B-202ENST00000489921 IL32P24001 234 aa17.17■□□□□ 0.34
TNFRSF1B-202ENST00000489921 CDKN2CP42773 168 aa17.17■□□□□ 0.34
TNFRSF1B-202ENST00000489921 CLNS1AP54105 237 aaKnown RBP17.17■□□□□ 0.34
TNFRSF1B-202ENST00000489921 NME5P56597 212 aa17.17■□□□□ 0.34
TNFRSF1B-202ENST00000489921 WDR4P57081 412 aaKnown RBP17.17■□□□□ 0.34
TNFRSF1B-202ENST00000489921 CEP85LQ5SZL2 805 aa17.17■□□□□ 0.34
TNFRSF1B-202ENST00000489921 ABLIM2Q6H8Q1 611 aa17.17■□□□□ 0.34
TNFRSF1B-202ENST00000489921 BHLHA15Q7RTS1 189 aaPredicted RBP17.17■□□□□ 0.34
TNFRSF1B-202ENST00000489921 MTDHQ86UE4 582 aaKnown RBP17.17■□□□□ 0.34
TNFRSF1B-202ENST00000489921 ADGRG3Q86Y34 549 aa17.17■□□□□ 0.34
TNFRSF1B-202ENST00000489921 VPS37AQ8NEZ2 397 aa17.17■□□□□ 0.34
TNFRSF1B-202ENST00000489921 TMEM234Q8WY98 164 aa17.17■□□□□ 0.34
TNFRSF1B-202ENST00000489921 ARL5BQ96KC2 179 aa17.17■□□□□ 0.34
TNFRSF1B-202ENST00000489921 SLC35A5Q9BS91 424 aa17.17■□□□□ 0.34
TNFRSF1B-202ENST00000489921 SERINC1Q9NRX5 453 aa17.17■□□□□ 0.34
TNFRSF1B-202ENST00000489921 AIG1Q9NVV5 245 aa17.17■□□□□ 0.34
TNFRSF1B-202ENST00000489921 MARCOQ9UEW3 520 aaPredicted RBP17.17■□□□□ 0.34
TNFRSF1B-202ENST00000489921 LAMP3Q9UQV4 416 aa17.17■□□□□ 0.34
TNFRSF1B-202ENST00000489921 SLC35A3Q9Y2D2 325 aa17.17■□□□□ 0.34
TNFRSF1B-202ENST00000489921 RNF115Q9Y4L5 304 aa17.17■□□□□ 0.34
TNFRSF1B-202ENST00000489921 JMJD1CQ15652 2540 aa17.17■□□□□ 0.34
TNFRSF1B-202ENST00000489921 FAM171A2A8MVW0 826 aa17.16■□□□□ 0.34
TNFRSF1B-202ENST00000489921 SULT2B1O00204 365 aa17.16■□□□□ 0.34
TNFRSF1B-202ENST00000489921 LYZL6O75951 148 aa17.16■□□□□ 0.34
TNFRSF1B-202ENST00000489921 COX5AP20674 150 aa17.16■□□□□ 0.34
TNFRSF1B-202ENST00000489921 S100A3P33764 101 aa17.16■□□□□ 0.34
TNFRSF1B-202ENST00000489921 APOBEC1P41238 236 aaKnown RBP17.16■□□□□ 0.34
TNFRSF1B-202ENST00000489921 KHKP50053 298 aa17.16■□□□□ 0.34
TNFRSF1B-202ENST00000489921 KCNJ10P78508 379 aa17.16■□□□□ 0.34
TNFRSF1B-202ENST00000489921 SYPL1Q16563 259 aa17.16■□□□□ 0.34
TNFRSF1B-202ENST00000489921 DPY19L1Q2PZI1 675 aa17.16■□□□□ 0.34
TNFRSF1B-202ENST00000489921 ATAD3BQ5T9A4 648 aa17.16■□□□□ 0.34
TNFRSF1B-202ENST00000489921 RNF130Q86XS8 419 aa17.16■□□□□ 0.34
TNFRSF1B-202ENST00000489921 ANKFN1Q8N957 763 aa17.16■□□□□ 0.34
TNFRSF1B-202ENST00000489921 CNOT9Q92600 299 aaKnown RBP17.16■□□□□ 0.34
TNFRSF1B-202ENST00000489921 DNAJA3Q96EY1 480 aa17.16■□□□□ 0.34
TNFRSF1B-202ENST00000489921 INPP5KQ9BT40 448 aa17.16■□□□□ 0.34
TNFRSF1B-202ENST00000489921 SLC38A1Q9H2H9 487 aa17.16■□□□□ 0.34
TNFRSF1B-202ENST00000489921 CXorf56Q9H5V9 222 aa17.16■□□□□ 0.34
TNFRSF1B-202ENST00000489921 KCNK9Q9NPC2 374 aa17.16■□□□□ 0.34
TNFRSF1B-202ENST00000489921 EXOSC3Q9NQT5 275 aaKnown RBP17.16■□□□□ 0.34
TNFRSF1B-202ENST00000489921 CHRNA9Q9UGM1 479 aa17.16■□□□□ 0.34
TNFRSF1B-202ENST00000489921 GPR45Q9Y5Y3 372 aa17.16■□□□□ 0.34
TNFRSF1B-202ENST00000489921 CCDC154A6NI56 674 aa17.15■□□□□ 0.34
TNFRSF1B-202ENST00000489921 RAMP1O60894 148 aa17.15■□□□□ 0.34
TNFRSF1B-202ENST00000489921 PGM3O95394 542 aa17.15■□□□□ 0.34
TNFRSF1B-202ENST00000489921 THBS1P07996 1170 aa17.15■□□□□ 0.34
TNFRSF1B-202ENST00000489921 CHRM4P08173 479 aa17.15■□□□□ 0.34
TNFRSF1B-202ENST00000489921 RYKP34925 604 aa17.15■□□□□ 0.34
TNFRSF1B-202ENST00000489921 BSPH1Q075Z2 132 aa17.15■□□□□ 0.34
TNFRSF1B-202ENST00000489921 PDK3Q15120 406 aa17.15■□□□□ 0.34
TNFRSF1B-202ENST00000489921 MAPK11Q15759 364 aa17.15■□□□□ 0.34
TNFRSF1B-202ENST00000489921 ZNF672Q499Z4 452 aaPredicted RBP17.15■□□□□ 0.34
TNFRSF1B-202ENST00000489921 DNAJC14Q6Y2X3 702 aaPredicted RBP17.15■□□□□ 0.34
TNFRSF1B-202ENST00000489921 GALNT5Q7Z7M9 940 aa17.15■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms