RNA–Protein interactions for RNA: ENST00000488463.5

COL9A2-208, Transcript of collagen type IX alpha 2 chain, humanhuman

TSL 5

Gene COL9A2, Length 1,005 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A2-208ENST00000488463 HNRNPCL3B7ZW38 293 aa12.68□□□□□ -0.38
COL9A2-208ENST00000488463 HNRNPCL1O60812 293 aaKnown RBP12.68□□□□□ -0.38
COL9A2-208ENST00000488463 CTAG2O75638 210 aa12.68□□□□□ -0.38
COL9A2-208ENST00000488463 HNRNPCL4P0DMR1 293 aa12.68□□□□□ -0.38
COL9A2-208ENST00000488463 ARAFP10398 606 aa12.68□□□□□ -0.38
COL9A2-208ENST00000488463 GPX2P18283 190 aa12.68□□□□□ -0.38
COL9A2-208ENST00000488463 NCF2P19878 526 aaPredicted RBP12.68□□□□□ -0.38
COL9A2-208ENST00000488463 RYKP34925 604 aa12.68□□□□□ -0.38
COL9A2-208ENST00000488463 ACAA2P42765 397 aaKnown RBP12.68□□□□□ -0.38
COL9A2-208ENST00000488463 CRISP3P54108 245 aa12.68□□□□□ -0.38
COL9A2-208ENST00000488463 RAC3P60763 192 aa12.68□□□□□ -0.38
COL9A2-208ENST00000488463 FAM27E3Q08E93 113 aa12.68□□□□□ -0.38
COL9A2-208ENST00000488463 MERTKQ12866 999 aa12.68□□□□□ -0.38
COL9A2-208ENST00000488463 EPS8Q12929 822 aa12.68□□□□□ -0.38
COL9A2-208ENST00000488463 MYBPHQ13203 477 aa12.68□□□□□ -0.38
COL9A2-208ENST00000488463 DAZAP2Q15038 168 aaPredicted RBP12.68□□□□□ -0.38
COL9A2-208ENST00000488463 RNF220Q5VTB9 566 aa12.68□□□□□ -0.38
COL9A2-208ENST00000488463 PRAMEF8Q5VWM4 474 aa12.68□□□□□ -0.38
COL9A2-208ENST00000488463 PRAMEF7Q5VXH5 474 aa12.68□□□□□ -0.38
COL9A2-208ENST00000488463 C3orf33Q6P1S2 294 aa12.68□□□□□ -0.38
COL9A2-208ENST00000488463 KIF18BQ86Y91 864 aa12.68□□□□□ -0.38
COL9A2-208ENST00000488463 CLIP4Q8N3C7 705 aa12.68□□□□□ -0.38
COL9A2-208ENST00000488463 ZNF610Q8N9Z0 462 aa12.68□□□□□ -0.38
COL9A2-208ENST00000488463 OR52P1PQ8NH57 321 aa12.68□□□□□ -0.38
COL9A2-208ENST00000488463 LINC01560Q8TB33 94 aa12.68□□□□□ -0.38
COL9A2-208ENST00000488463 TMEM234Q8WY98 164 aa12.68□□□□□ -0.38
COL9A2-208ENST00000488463 CPNE4Q96A23 557 aaPredicted RBP12.68□□□□□ -0.38
COL9A2-208ENST00000488463 LRRC46Q96FV0 321 aa12.68□□□□□ -0.38
COL9A2-208ENST00000488463 CPPED1Q9BRF8 314 aaPredicted RBP12.68□□□□□ -0.38
COL9A2-208ENST00000488463 TMEM120AQ9BXJ8 343 aa12.68□□□□□ -0.38
COL9A2-208ENST00000488463 RABEP2Q9H5N1 569 aa12.68□□□□□ -0.38
COL9A2-208ENST00000488463 CTPS2Q9NRF8 586 aa12.68□□□□□ -0.38
COL9A2-208ENST00000488463 PLSCR4Q9NRQ2 329 aa12.68□□□□□ -0.38
COL9A2-208ENST00000488463 CALML5Q9NZT1 146 aa12.68□□□□□ -0.38
COL9A2-208ENST00000488463 ZNF443Q9Y2A4 671 aaPredicted RBP12.68□□□□□ -0.38
COL9A2-208ENST00000488463 GJE1A6NN92 205 aa12.67□□□□□ -0.38
COL9A2-208ENST00000488463 SMAD9O15198 467 aaKnown RBP12.67□□□□□ -0.38
COL9A2-208ENST00000488463 SYNGR4O95473 234 aa12.67□□□□□ -0.38
COL9A2-208ENST00000488463 THBS1P07996 1170 aa12.67□□□□□ -0.38
COL9A2-208ENST00000488463 EPXP11678 715 aa12.67□□□□□ -0.38
COL9A2-208ENST00000488463 IL7RP16871 459 aa12.67□□□□□ -0.38
COL9A2-208ENST00000488463 ENPP1P22413 925 aa12.67□□□□□ -0.38
COL9A2-208ENST00000488463 AGTR1P30556 359 aa12.67□□□□□ -0.38
COL9A2-208ENST00000488463 APOBEC1P41238 236 aaKnown RBP12.67□□□□□ -0.38
COL9A2-208ENST00000488463 IDH2P48735 452 aaKnown RBP12.67□□□□□ -0.38
COL9A2-208ENST00000488463 RUNDC3AQ59EK9 446 aa12.67□□□□□ -0.38
COL9A2-208ENST00000488463 PDSS1Q5T2R2 415 aa12.67□□□□□ -0.38
COL9A2-208ENST00000488463 C22orf34Q6ZV56 151 aa12.67□□□□□ -0.38
COL9A2-208ENST00000488463 GRINAQ7Z429 371 aa12.67□□□□□ -0.38
COL9A2-208ENST00000488463 COMTD1Q86VU5 262 aa12.67□□□□□ -0.38
COL9A2-208ENST00000488463 PEX5LQ8IYB4 626 aa12.67□□□□□ -0.38
COL9A2-208ENST00000488463 ATP6V1C2Q8NEY4 427 aa12.67□□□□□ -0.38
COL9A2-208ENST00000488463 OR6K3Q8NGY3 331 aa12.67□□□□□ -0.38
COL9A2-208ENST00000488463 TSPEARQ8WU66 669 aa12.67□□□□□ -0.38
COL9A2-208ENST00000488463 ABHD3Q8WU67 409 aa12.67□□□□□ -0.38
COL9A2-208ENST00000488463 ARL5BQ96KC2 179 aa12.67□□□□□ -0.38
COL9A2-208ENST00000488463 ZNF317Q96PQ6 595 aaPredicted RBP12.67□□□□□ -0.38
COL9A2-208ENST00000488463 ADAM19Q9H013 955 aa12.67□□□□□ -0.38
COL9A2-208ENST00000488463 RAD21L1Q9H4I0 556 aa12.67□□□□□ -0.38
COL9A2-208ENST00000488463 GLRX2Q9NS18 164 aa12.67□□□□□ -0.38
COL9A2-208ENST00000488463 TRIM33Q9UPN9 1127 aa12.67□□□□□ -0.38
COL9A2-208ENST00000488463 IGHV3-15A0A0B4J1V0 119 aa12.66□□□□□ -0.38
COL9A2-208ENST00000488463 CFAP73A6NFT4 308 aa12.66□□□□□ -0.38
COL9A2-208ENST00000488463 TUBAL3A6NHL2 446 aa12.66□□□□□ -0.38
COL9A2-208ENST00000488463 A6NNC1 897 aa12.66□□□□□ -0.38
COL9A2-208ENST00000488463 FBP2O00757 339 aa12.66□□□□□ -0.38
COL9A2-208ENST00000488463 SMNDC1O75940 238 aaKnown RBP eCLIP12.66□□□□□ -0.38
COL9A2-208ENST00000488463 PGM3O95394 542 aa12.66□□□□□ -0.38
COL9A2-208ENST00000488463 GKN3PP0CG01 181 aa12.66□□□□□ -0.38
COL9A2-208ENST00000488463 PRG2P13727 222 aa12.66□□□□□ -0.38
COL9A2-208ENST00000488463 CD79BP40259 229 aa12.66□□□□□ -0.38
COL9A2-208ENST00000488463 MDH1P40925 334 aaKnown RBP12.66□□□□□ -0.38
COL9A2-208ENST00000488463 SLC1A3P43003 542 aa12.66□□□□□ -0.38
COL9A2-208ENST00000488463 CPA2P48052 419 aa12.66□□□□□ -0.38
COL9A2-208ENST00000488463 SELPLGQ14242 412 aa12.66□□□□□ -0.38
COL9A2-208ENST00000488463 LIN52Q52LA3 116 aa12.66□□□□□ -0.38
COL9A2-208ENST00000488463 SYT14P1Q58G82 188 aa12.66□□□□□ -0.38
COL9A2-208ENST00000488463 TMPPEQ6ZT21 453 aa12.66□□□□□ -0.38
COL9A2-208ENST00000488463 FCRLAQ7L513 359 aa12.66□□□□□ -0.38
COL9A2-208ENST00000488463 SPATA9Q9BWV2 254 aa12.66□□□□□ -0.38
COL9A2-208ENST00000488463 PRRG4Q9BZD6 226 aa12.66□□□□□ -0.38
COL9A2-208ENST00000488463 OR11A1Q9GZK7 315 aa12.66□□□□□ -0.38
COL9A2-208ENST00000488463 TMEM38AQ9H6F2 299 aa12.66□□□□□ -0.38
COL9A2-208ENST00000488463 GP6Q9HCN6 339 aa12.66□□□□□ -0.38
COL9A2-208ENST00000488463 TIGARQ9NQ88 270 aa12.66□□□□□ -0.38
COL9A2-208ENST00000488463 RASSF1Q9NS23 344 aa12.66□□□□□ -0.38
COL9A2-208ENST00000488463 CHRNA9Q9UGM1 479 aa12.66□□□□□ -0.38
COL9A2-208ENST00000488463 LEF1Q9UJU2 399 aaPredicted RBP12.66□□□□□ -0.38
COL9A2-208ENST00000488463 OSGIN1Q9UJX0 560 aa12.66□□□□□ -0.38
COL9A2-208ENST00000488463 PROCRQ9UNN8 238 aa12.66□□□□□ -0.38
COL9A2-208ENST00000488463 TESMINQ9Y4I5 508 aa12.66□□□□□ -0.38
COL9A2-208ENST00000488463 FLNAP21333 2647 aaKnown RBP12.66□□□□□ -0.38
COL9A2-208ENST00000488463 PABPC4LP0CB38 370 aaKnown RBP12.65□□□□□ -0.38
COL9A2-208ENST00000488463 ETS2P15036 469 aa12.65□□□□□ -0.38
COL9A2-208ENST00000488463 PPIBP23284 216 aaKnown RBP12.65□□□□□ -0.38
COL9A2-208ENST00000488463 SLC7A1P30825 629 aa12.65□□□□□ -0.38
COL9A2-208ENST00000488463 UGT2B10P36537 528 aa12.65□□□□□ -0.38
COL9A2-208ENST00000488463 CPOXP36551 454 aa12.65□□□□□ -0.38
COL9A2-208ENST00000488463 DIO1P49895 249 aa12.65□□□□□ -0.38
COL9A2-208ENST00000488463 GNA13Q14344 377 aa12.65□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms