RNA–Protein interactions for RNA: ENST00000487354.1

MCF2L-228, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 3

Gene MCF2L, Length 553 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-228ENST00000487354 SYT14P1Q58G82 188 aa13.41□□□□□ -0.26
MCF2L-228ENST00000487354 PDZK1Q5T2W1 519 aa13.41□□□□□ -0.26
MCF2L-228ENST00000487354 LIPNQ5VXI9 398 aa13.41□□□□□ -0.26
MCF2L-228ENST00000487354 ZYG11AQ6WRX3 759 aa13.41□□□□□ -0.26
MCF2L-228ENST00000487354 OLIG3Q7RTU3 272 aa13.41□□□□□ -0.26
MCF2L-228ENST00000487354 MTDHQ86UE4 582 aaKnown RBP13.41□□□□□ -0.26
MCF2L-228ENST00000487354 UBE2J2Q8N2K1 259 aa13.41□□□□□ -0.26
MCF2L-228ENST00000487354 TMCO5AQ8N6Q1 288 aa13.41□□□□□ -0.26
MCF2L-228ENST00000487354 ANKS4BQ8N8V4 417 aa13.41□□□□□ -0.26
MCF2L-228ENST00000487354 TOR1AIP2Q8NFQ8 470 aa13.41□□□□□ -0.26
MCF2L-228ENST00000487354 ARL5BQ96KC2 179 aa13.41□□□□□ -0.26
MCF2L-228ENST00000487354 ACTRT3Q9BYD9 372 aa13.41□□□□□ -0.26
MCF2L-228ENST00000487354 BPESC1Q9GZL8 116 aa13.41□□□□□ -0.26
MCF2L-228ENST00000487354 SERHL2Q9H4I8 314 aa13.41□□□□□ -0.26
MCF2L-228ENST00000487354 SLC17A5Q9NRA2 495 aa13.41□□□□□ -0.26
MCF2L-228ENST00000487354 EMC3Q9P0I2 261 aa13.41□□□□□ -0.26
MCF2L-228ENST00000487354 NOSIPQ9Y314 301 aaKnown RBP13.41□□□□□ -0.26
MCF2L-228ENST00000487354 PKD1L1Q8TDX9 2849 aa13.4□□□□□ -0.26
MCF2L-228ENST00000487354 EXOC1LA0A1B0GW35 172 aa13.4□□□□□ -0.26
MCF2L-228ENST00000487354 H3BNH8 94 aa13.4□□□□□ -0.26
MCF2L-228ENST00000487354 GTPBP1O00178 669 aaKnown RBP13.4□□□□□ -0.26
MCF2L-228ENST00000487354 SULT2B1O00204 365 aa13.4□□□□□ -0.26
MCF2L-228ENST00000487354 LSM1O15116 133 aaKnown RBP13.4□□□□□ -0.26
MCF2L-228ENST00000487354 TCF21O43680 179 aa13.4□□□□□ -0.26
MCF2L-228ENST00000487354 KIAA0513O60268 411 aa13.4□□□□□ -0.26
MCF2L-228ENST00000487354 UROSP10746 265 aa13.4□□□□□ -0.26
MCF2L-228ENST00000487354 ATP6V1C1P21283 382 aa13.4□□□□□ -0.26
MCF2L-228ENST00000487354 CCR4P51679 360 aa13.4□□□□□ -0.26
MCF2L-228ENST00000487354 RPL38P63173 70 aaKnown RBP13.4□□□□□ -0.26
MCF2L-228ENST00000487354 PLAURQ03405 335 aa13.4□□□□□ -0.26
MCF2L-228ENST00000487354 CHRNB3Q05901 458 aa13.4□□□□□ -0.26
MCF2L-228ENST00000487354 RNF165Q6ZSG1 346 aa13.4□□□□□ -0.26
MCF2L-228ENST00000487354 DEPDC4Q8N2C3 294 aa13.4□□□□□ -0.26
MCF2L-228ENST00000487354 ZNF614Q8N883 585 aa13.4□□□□□ -0.26
MCF2L-228ENST00000487354 OR7A2PQ8NGA2 310 aa13.4□□□□□ -0.26
MCF2L-228ENST00000487354 ST8SIA1Q92185 356 aa13.4□□□□□ -0.26
MCF2L-228ENST00000487354 FBXO17Q96EF6 278 aa13.4□□□□□ -0.26
MCF2L-228ENST00000487354 DNAJA3Q96EY1 480 aa13.4□□□□□ -0.26
MCF2L-228ENST00000487354 FMO2Q99518 471 aa13.4□□□□□ -0.26
MCF2L-228ENST00000487354 THUMPD3Q9BV44 507 aaKnown RBP13.4□□□□□ -0.26
MCF2L-228ENST00000487354 LAT2Q9GZY6 243 aa13.4□□□□□ -0.26
MCF2L-228ENST00000487354 ATP6V1HQ9UI12 483 aa13.4□□□□□ -0.26
MCF2L-228ENST00000487354 PMF1-BGLAPU3KQ54 211 aa13.4□□□□□ -0.26
MCF2L-228ENST00000487354 LOC390937A0A1W2PQ73 354 aa13.39□□□□□ -0.27
MCF2L-228ENST00000487354 LRP5LA4QPB2 252 aa13.39□□□□□ -0.27
MCF2L-228ENST00000487354 SERINC4A6NH21 518 aa13.39□□□□□ -0.27
MCF2L-228ENST00000487354 SPRY1O43609 319 aaPredicted RBP13.39□□□□□ -0.27
MCF2L-228ENST00000487354 SLU7O95391 586 aaKnown RBP13.39□□□□□ -0.27
MCF2L-228ENST00000487354 PROCP04070 461 aa13.39□□□□□ -0.27
MCF2L-228ENST00000487354 GSTA1P08263 222 aa13.39□□□□□ -0.27
MCF2L-228ENST00000487354 LAMP1P11279 417 aa13.39□□□□□ -0.27
MCF2L-228ENST00000487354 BCKDHAP12694 445 aa13.39□□□□□ -0.27
MCF2L-228ENST00000487354 ASMTP46597 345 aa13.39□□□□□ -0.27
MCF2L-228ENST00000487354 CSNK2A1P68400 391 aaPredicted RBP13.39□□□□□ -0.27
MCF2L-228ENST00000487354 C9orf135Q5VTT2 229 aa13.39□□□□□ -0.27
MCF2L-228ENST00000487354 LIPMQ5VYY2 423 aa13.39□□□□□ -0.27
MCF2L-228ENST00000487354 OR7E24Q6IFN5 339 aa13.39□□□□□ -0.27
MCF2L-228ENST00000487354 CCDC103Q8IW40 242 aa13.39□□□□□ -0.27
MCF2L-228ENST00000487354 C17orf78Q8N4C9 275 aa13.39□□□□□ -0.27
MCF2L-228ENST00000487354 FAM71CQ8NEG0 241 aa13.39□□□□□ -0.27
MCF2L-228ENST00000487354 C1orf162Q8NEQ5 155 aaPredicted RBP13.39□□□□□ -0.27
MCF2L-228ENST00000487354 SEMA6DQ8NFY4 1073 aa13.39□□□□□ -0.27
MCF2L-228ENST00000487354 OR5D16Q8NGK9 328 aa13.39□□□□□ -0.27
MCF2L-228ENST00000487354 MTERF3Q96E29 417 aa13.39□□□□□ -0.27
MCF2L-228ENST00000487354 CHMP6Q96FZ7 201 aa13.39□□□□□ -0.27
MCF2L-228ENST00000487354 OR7D2Q96RA2 312 aa13.39□□□□□ -0.27
MCF2L-228ENST00000487354 SDF2Q99470 211 aa13.39□□□□□ -0.27
MCF2L-228ENST00000487354 CCDC106Q9BWC9 280 aa13.39□□□□□ -0.27
MCF2L-228ENST00000487354 NMUR2Q9GZQ4 415 aa13.39□□□□□ -0.27
MCF2L-228ENST00000487354 IQCGQ9H095 443 aaKnown RBP13.39□□□□□ -0.27
MCF2L-228ENST00000487354 FKRPQ9H9S5 495 aa13.39□□□□□ -0.27
MCF2L-228ENST00000487354 SLC7A10Q9NS82 523 aa13.39□□□□□ -0.27
MCF2L-228ENST00000487354 ACER3Q9NUN7 267 aa13.39□□□□□ -0.27
MCF2L-228ENST00000487354 DCTN4Q9UJW0 460 aa13.39□□□□□ -0.27
MCF2L-228ENST00000487354 MOKQ9UQ07 419 aa13.39□□□□□ -0.27
MCF2L-228ENST00000487354 FKBP7Q9Y680 259 aa13.39□□□□□ -0.27
MCF2L-228ENST00000487354 H3BQF6 201 aa13.38□□□□□ -0.27
MCF2L-228ENST00000487354 SLC28A1O00337 649 aa13.38□□□□□ -0.27
MCF2L-228ENST00000487354 SCAMP2O15127 329 aaKnown RBP13.38□□□□□ -0.27
MCF2L-228ENST00000487354 URI1O94763 535 aaPredicted RBP13.38□□□□□ -0.27
MCF2L-228ENST00000487354 PMS2P2O95744 297 aa13.38□□□□□ -0.27
MCF2L-228ENST00000487354 ABHD2P08910 425 aa13.38□□□□□ -0.27
MCF2L-228ENST00000487354 MYL2P10916 166 aa13.38□□□□□ -0.27
MCF2L-228ENST00000487354 DNAJB13P59910 316 aa13.38□□□□□ -0.27
MCF2L-228ENST00000487354 H3F3AP84243 136 aa13.38□□□□□ -0.27
MCF2L-228ENST00000487354 MERTKQ12866 999 aa13.38□□□□□ -0.27
MCF2L-228ENST00000487354 TP53BP2Q13625 1128 aa13.38□□□□□ -0.27
MCF2L-228ENST00000487354 ZNF141Q15928 474 aa13.38□□□□□ -0.27
MCF2L-228ENST00000487354 C17orf53Q8N3J3 647 aaPredicted RBP13.38□□□□□ -0.27
MCF2L-228ENST00000487354 ACMSDQ8TDX5 336 aa13.38□□□□□ -0.27
MCF2L-228ENST00000487354 ADAMTS15Q8TE58 950 aa13.38□□□□□ -0.27
MCF2L-228ENST00000487354 SLC25A43Q8WUT9 341 aaPredicted RBP13.38□□□□□ -0.27
MCF2L-228ENST00000487354 TRMOQ9BU70 441 aa13.38□□□□□ -0.27
MCF2L-228ENST00000487354 OR11A1Q9GZK7 315 aa13.38□□□□□ -0.27
MCF2L-228ENST00000487354 C12orf65Q9H3J6 166 aaKnown RBP13.38□□□□□ -0.27
MCF2L-228ENST00000487354 CTPS2Q9NRF8 586 aa13.38□□□□□ -0.27
MCF2L-228ENST00000487354 GIMAP2Q9UG22 337 aa13.38□□□□□ -0.27
MCF2L-228ENST00000487354 AMDHD2Q9Y303 409 aa13.38□□□□□ -0.27
MCF2L-228ENST00000487354 IGHV1-18A0A0C4DH31 117 aa13.37□□□□□ -0.27
MCF2L-228ENST00000487354 FCMRO60667 390 aa13.37□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms