RNA–Protein interactions for RNA: ENST00000486641.2

CCDC171-208, Transcript of coiled-coil domain containing 171, humanhuman

TSL 1 (best)

Gene CCDC171, Length 2,322 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC171-208ENST00000486641 ZDHHC6Q9H6R6 413 aa9.86□□□□□ -0.83
CCDC171-208ENST00000486641 ANKRD10Q9NXR5 420 aa9.86□□□□□ -0.83
CCDC171-208ENST00000486641 TAS2R10Q9NYW0 307 aa9.86□□□□□ -0.83
CCDC171-208ENST00000486641 AHSPQ9NZD4 102 aa9.86□□□□□ -0.83
CCDC171-208ENST00000486641 MOKQ9UQ07 419 aa9.86□□□□□ -0.83
CCDC171-208ENST00000486641 CASP8AP2Q9UKL3 1982 aa9.86□□□□□ -0.83
CCDC171-208ENST00000486641 FRMPD3Q5JV73 1810 aa9.86□□□□□ -0.83
CCDC171-208ENST00000486641 A0A0G2JPF8 293 aa9.85□□□□□ -0.83
CCDC171-208ENST00000486641 UBE2QL1A1L167 161 aa9.85□□□□□ -0.83
CCDC171-208ENST00000486641 HNRNPCL3B7ZW38 293 aa9.85□□□□□ -0.83
CCDC171-208ENST00000486641 ADAM12O43184 909 aa9.85□□□□□ -0.83
CCDC171-208ENST00000486641 DDNO94850 711 aaPredicted RBP9.85□□□□□ -0.83
CCDC171-208ENST00000486641 ACAA1P09110 424 aaPredicted RBP9.85□□□□□ -0.83
CCDC171-208ENST00000486641 HNRNPCL4P0DMR1 293 aa9.85□□□□□ -0.83
CCDC171-208ENST00000486641 CLUP10909 449 aa9.85□□□□□ -0.83
CCDC171-208ENST00000486641 HMGA1P17096 107 aaKnown RBP9.85□□□□□ -0.83
CCDC171-208ENST00000486641 ITGB8P26012 769 aa9.85□□□□□ -0.83
CCDC171-208ENST00000486641 ADH7P40394 386 aa9.85□□□□□ -0.83
CCDC171-208ENST00000486641 STARP49675 285 aa9.85□□□□□ -0.83
CCDC171-208ENST00000486641 P2RX1P51575 399 aa9.85□□□□□ -0.83
CCDC171-208ENST00000486641 SMAD3P84022 425 aaKnown RBP9.85□□□□□ -0.83
CCDC171-208ENST00000486641 COL9A2Q14055 689 aaPredicted RBP9.85□□□□□ -0.83
CCDC171-208ENST00000486641 PRSS55Q6UWB4 352 aaPredicted RBP9.85□□□□□ -0.83
CCDC171-208ENST00000486641 MBOAT2Q6ZWT7 520 aa9.85□□□□□ -0.83
CCDC171-208ENST00000486641 TAS1R1Q7RTX1 841 aa9.85□□□□□ -0.83
CCDC171-208ENST00000486641 OVCH1Q7RTY7 1134 aa9.85□□□□□ -0.83
CCDC171-208ENST00000486641 GDF7Q7Z4P5 450 aa9.85□□□□□ -0.83
CCDC171-208ENST00000486641 ZFP82Q8N141 532 aa9.85□□□□□ -0.83
CCDC171-208ENST00000486641 MUC20Q8N307 709 aaPredicted RBP9.85□□□□□ -0.83
CCDC171-208ENST00000486641 C12orf45Q8N5I9 185 aaPredicted RBP9.85□□□□□ -0.83
CCDC171-208ENST00000486641 DNAAF1Q8NEP3 725 aa9.85□□□□□ -0.83
CCDC171-208ENST00000486641 GLYATL2Q8WU03 294 aa9.85□□□□□ -0.83
CCDC171-208ENST00000486641 PPP1R16AQ96I34 528 aa9.85□□□□□ -0.83
CCDC171-208ENST00000486641 LRIG1Q96JA1 1093 aa9.85□□□□□ -0.83
CCDC171-208ENST00000486641 CMTM3Q96MX0 182 aa9.85□□□□□ -0.83
CCDC171-208ENST00000486641 GFI1Q99684 422 aa9.85□□□□□ -0.83
CCDC171-208ENST00000486641 INPP5EQ9NRR6 644 aa9.85□□□□□ -0.83
CCDC171-208ENST00000486641 EPHA6Q9UF33 1036 aa9.85□□□□□ -0.83
CCDC171-208ENST00000486641 LHX6Q9UPM6 363 aa9.85□□□□□ -0.83
CCDC171-208ENST00000486641 OR6C68A6NDL8 312 aa9.85□□□□□ -0.83
CCDC171-208ENST00000486641 TMPRSS11DO60235 418 aa9.85□□□□□ -0.83
CCDC171-208ENST00000486641 FGBP02675 491 aa9.85□□□□□ -0.83
CCDC171-208ENST00000486641 GP1BAP07359 652 aa9.85□□□□□ -0.83
CCDC171-208ENST00000486641 SBK2P0C263 348 aa9.85□□□□□ -0.83
CCDC171-208ENST00000486641 PRG2P13727 222 aa9.85□□□□□ -0.83
CCDC171-208ENST00000486641 IL9P15248 144 aa9.85□□□□□ -0.83
CCDC171-208ENST00000486641 MGMTP16455 207 aa9.85□□□□□ -0.83
CCDC171-208ENST00000486641 DPP4P27487 766 aa9.85□□□□□ -0.83
CCDC171-208ENST00000486641 CD70P32970 193 aa9.85□□□□□ -0.83
CCDC171-208ENST00000486641 RORAP35398 523 aa9.85□□□□□ -0.83
CCDC171-208ENST00000486641 AKR1C2P52895 323 aa9.85□□□□□ -0.83
CCDC171-208ENST00000486641 HCCSP53701 268 aa9.85□□□□□ -0.83
CCDC171-208ENST00000486641 CLDN12P56749 244 aa9.85□□□□□ -0.83
CCDC171-208ENST00000486641 FXYD6P3P58550 94 aa9.85□□□□□ -0.83
CCDC171-208ENST00000486641 SNRPD1P62314 119 aaKnown RBP9.85□□□□□ -0.83
CCDC171-208ENST00000486641 RPS15P62841 145 aaKnown RBP9.85□□□□□ -0.83
CCDC171-208ENST00000486641 UBE2IP63279 158 aaKnown RBP9.85□□□□□ -0.83
CCDC171-208ENST00000486641 PRR5P85299 388 aa9.85□□□□□ -0.83
CCDC171-208ENST00000486641 AKR1C1Q04828 323 aa9.85□□□□□ -0.83
CCDC171-208ENST00000486641 LMAN2Q12907 356 aa9.85□□□□□ -0.83
CCDC171-208ENST00000486641 KRT33BQ14525 404 aa9.85□□□□□ -0.83
CCDC171-208ENST00000486641 LASP1Q14847 261 aaKnown RBP9.85□□□□□ -0.83
CCDC171-208ENST00000486641 MANEAQ5SRI9 462 aa9.85□□□□□ -0.83
CCDC171-208ENST00000486641 KHDRBS2Q5VWX1 349 aaKnown RBP9.85□□□□□ -0.83
CCDC171-208ENST00000486641 TMPRSS9Q7Z410 1059 aa9.85□□□□□ -0.83
CCDC171-208ENST00000486641 RFLNBQ8N5W9 214 aa9.85□□□□□ -0.83
CCDC171-208ENST00000486641 AMER3Q8N944 861 aa9.85□□□□□ -0.83
CCDC171-208ENST00000486641 SLC22A8Q8TCC7 542 aa9.85□□□□□ -0.83
CCDC171-208ENST00000486641 SMPDL3BQ92485 455 aa9.85□□□□□ -0.83
CCDC171-208ENST00000486641 NXPE3Q969Y0 559 aa9.85□□□□□ -0.83
CCDC171-208ENST00000486641 C16orf58Q96GQ5 468 aa9.85□□□□□ -0.83
CCDC171-208ENST00000486641 MS4A4AQ96JQ5 239 aa9.85□□□□□ -0.83
CCDC171-208ENST00000486641 MS4A4EQ96PG1 132 aa9.85□□□□□ -0.83
CCDC171-208ENST00000486641 OR14A2Q96R54 314 aa9.85□□□□□ -0.83
CCDC171-208ENST00000486641 FAM83CQ9BQN1 747 aa9.85□□□□□ -0.83
CCDC171-208ENST00000486641 RIOK2Q9BVS4 552 aaKnown RBP9.85□□□□□ -0.83
CCDC171-208ENST00000486641 ZCCHC2Q9C0B9 1178 aaKnown RBP9.85□□□□□ -0.83
CCDC171-208ENST00000486641 WDR13Q9H1Z4 485 aa9.85□□□□□ -0.83
CCDC171-208ENST00000486641 OR52D1Q9H346 318 aa9.85□□□□□ -0.83
CCDC171-208ENST00000486641 ADGRL4Q9HBW9 690 aa9.85□□□□□ -0.83
CCDC171-208ENST00000486641 GSN-AS1Q9NRJ2 163 aa9.85□□□□□ -0.83
CCDC171-208ENST00000486641 SLC22A11Q9NSA0 550 aa9.85□□□□□ -0.83
CCDC171-208ENST00000486641 TINAGQ9UJW2 476 aa9.85□□□□□ -0.83
CCDC171-208ENST00000486641 SLC13A4Q9UKG4 626 aa9.85□□□□□ -0.83
CCDC171-208ENST00000486641 Q9Y3F1 56 aa9.85□□□□□ -0.83
CCDC171-208ENST00000486641 TMEM218A2RU14 115 aa9.84□□□□□ -0.83
CCDC171-208ENST00000486641 FAM25EA8MYX2 175 aa9.84□□□□□ -0.83
CCDC171-208ENST00000486641 H0YC42 278 aa9.84□□□□□ -0.83
CCDC171-208ENST00000486641 SGCEO43556 437 aa9.84□□□□□ -0.83
CCDC171-208ENST00000486641 ARL6IP5O75915 188 aa9.84□□□□□ -0.83
CCDC171-208ENST00000486641 CRYBA1P05813 215 aa9.84□□□□□ -0.83
CCDC171-208ENST00000486641 UBBP0CG47 229 aa9.84□□□□□ -0.83
CCDC171-208ENST00000486641 UBCP0CG48 685 aaKnown RBP9.84□□□□□ -0.83
CCDC171-208ENST00000486641 ADCYAP1P18509 176 aa9.84□□□□□ -0.83
CCDC171-208ENST00000486641 KHKP50053 298 aa9.84□□□□□ -0.83
CCDC171-208ENST00000486641 RPS11P62280 158 aaKnown RBP eCLIP9.84□□□□□ -0.83
CCDC171-208ENST00000486641 RPS27AP62979 156 aaKnown RBP9.84□□□□□ -0.83
CCDC171-208ENST00000486641 UBA52P62987 128 aaKnown RBP9.84□□□□□ -0.83
CCDC171-208ENST00000486641 TP53I3Q53FA7 332 aa9.84□□□□□ -0.83
CCDC171-208ENST00000486641 CCDC157Q569K6 752 aa9.84□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms