RNA–Protein interactions for RNA: ENST00000486618.1

HDAC3-209, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 711 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-209ENST00000486618 HCN3Q9P1Z3 774 aa6.21□□□□□ -1.42
HDAC3-209ENST00000486618 TAC3Q9UHF0 121 aa6.21□□□□□ -1.42
HDAC3-209ENST00000486618 ERGIC3Q9Y282 383 aa6.21□□□□□ -1.42
HDAC3-209ENST00000486618 L3MBTL1Q9Y468 752 aa6.21□□□□□ -1.42
HDAC3-209ENST00000486618 HIVEP2P31629 2446 aa6.21□□□□□ -1.42
HDAC3-209ENST00000486618 COL6A5A8TX70 2615 aa6.21□□□□□ -1.42
HDAC3-209ENST00000486618 TLN2Q9Y4G6 2542 aa6.21□□□□□ -1.42
HDAC3-209ENST00000486618 LOC100509620A0A075B734 347 aa6.2□□□□□ -1.42
HDAC3-209ENST00000486618 KCNE1BA0A087WTH5 132 aa6.2□□□□□ -1.42
HDAC3-209ENST00000486618 A0A087WUV0 522 aaPredicted RBP6.2□□□□□ -1.42
HDAC3-209ENST00000486618 IGKV1-8A0A0C4DH67 115 aa6.2□□□□□ -1.42
HDAC3-209ENST00000486618 MIF4GDA9UHW6 222 aaKnown RBP6.2□□□□□ -1.42
HDAC3-209ENST00000486618 NPIPA2E9PIF3 369 aa6.2□□□□□ -1.42
HDAC3-209ENST00000486618 NPIPA3F8WFD2 350 aa6.2□□□□□ -1.42
HDAC3-209ENST00000486618 ACOT7O00154 380 aa6.2□□□□□ -1.42
HDAC3-209ENST00000486618 BCKDKO14874 412 aa6.2□□□□□ -1.42
HDAC3-209ENST00000486618 P2RX6O15547 441 aa6.2□□□□□ -1.42
HDAC3-209ENST00000486618 NDUFA2O43678 99 aa6.2□□□□□ -1.42
HDAC3-209ENST00000486618 CDH16O75309 829 aa6.2□□□□□ -1.42
HDAC3-209ENST00000486618 NDUFS3O75489 264 aa6.2□□□□□ -1.42
HDAC3-209ENST00000486618 CATP04040 527 aaKnown RBP6.2□□□□□ -1.42
HDAC3-209ENST00000486618 RAF1P04049 648 aa6.2□□□□□ -1.42
HDAC3-209ENST00000486618 CLEC2LP0C7M8 214 aa6.2□□□□□ -1.42
HDAC3-209ENST00000486618 ERGP11308 486 aa6.2□□□□□ -1.42
HDAC3-209ENST00000486618 IL1RNP18510 177 aa6.2□□□□□ -1.42
HDAC3-209ENST00000486618 FUT1P19526 365 aa6.2□□□□□ -1.42
HDAC3-209ENST00000486618 CD247P20963 164 aa6.2□□□□□ -1.42
HDAC3-209ENST00000486618 RPS3P23396 243 aaKnown RBP eCLIP6.2□□□□□ -1.42
HDAC3-209ENST00000486618 ACVR2AP27037 513 aa6.2□□□□□ -1.42
HDAC3-209ENST00000486618 PTPN7P35236 360 aa6.2□□□□□ -1.42
HDAC3-209ENST00000486618 GRK3P35626 688 aa6.2□□□□□ -1.42
HDAC3-209ENST00000486618 RFC3P40938 356 aa6.2□□□□□ -1.42
HDAC3-209ENST00000486618 FRKP42685 505 aaPredicted RBP6.2□□□□□ -1.42
HDAC3-209ENST00000486618 KIR3DL2P43630 455 aa6.2□□□□□ -1.42
HDAC3-209ENST00000486618 MARCKSL1P49006 195 aa6.2□□□□□ -1.42
HDAC3-209ENST00000486618 MFAP4P55083 255 aa6.2□□□□□ -1.42
HDAC3-209ENST00000486618 DLX5P56178 289 aa6.2□□□□□ -1.42
HDAC3-209ENST00000486618 RPS15AP62244 130 aaKnown RBP6.2□□□□□ -1.42
HDAC3-209ENST00000486618 ACVR1Q04771 509 aa6.2□□□□□ -1.42
HDAC3-209ENST00000486618 KEAP1Q14145 624 aa6.2□□□□□ -1.42
HDAC3-209ENST00000486618 FASTKD3Q14CZ7 662 aaKnown RBP6.2□□□□□ -1.42
HDAC3-209ENST00000486618 PDK4Q16654 411 aa6.2□□□□□ -1.42
HDAC3-209ENST00000486618 DEFB113Q30KQ7 82 aa6.2□□□□□ -1.42
HDAC3-209ENST00000486618 GXYLT1Q4G148 440 aa6.2□□□□□ -1.42
HDAC3-209ENST00000486618 YIF1BQ5BJH7 314 aa6.2□□□□□ -1.42
HDAC3-209ENST00000486618 EMC4Q5J8M3 183 aa6.2□□□□□ -1.42
HDAC3-209ENST00000486618 CDKL4Q5MAI5 379 aa6.2□□□□□ -1.42
HDAC3-209ENST00000486618 PDZK1Q5T2W1 519 aa6.2□□□□□ -1.42
HDAC3-209ENST00000486618 LIPMQ5VYY2 423 aa6.2□□□□□ -1.42
HDAC3-209ENST00000486618 TMEM198Q66K66 360 aa6.2□□□□□ -1.42
HDAC3-209ENST00000486618 C3orf33Q6P1S2 294 aa6.2□□□□□ -1.42
HDAC3-209ENST00000486618 CCDC137Q6PK04 289 aaKnown RBP6.2□□□□□ -1.42
HDAC3-209ENST00000486618 WDR88Q6ZMY6 472 aa6.2□□□□□ -1.42
HDAC3-209ENST00000486618 RTL4Q6ZR62 310 aa6.2□□□□□ -1.42
HDAC3-209ENST00000486618 ZNF534Q76KX8 674 aa6.2□□□□□ -1.42
HDAC3-209ENST00000486618 TRILQ7L0X0 811 aa6.2□□□□□ -1.42
HDAC3-209ENST00000486618 PAGE2Q7Z2X7 111 aa6.2□□□□□ -1.42
HDAC3-209ENST00000486618 CDC20BQ86Y33 519 aa6.2□□□□□ -1.42
HDAC3-209ENST00000486618 TMEM156Q8N614 296 aa6.2□□□□□ -1.42
HDAC3-209ENST00000486618 ZFP62Q8NB50 900 aaPredicted RBP6.2□□□□□ -1.42
HDAC3-209ENST00000486618 C17orf47Q8NEP4 570 aa6.2□□□□□ -1.42
HDAC3-209ENST00000486618 NUP43Q8NFH3 380 aa6.2□□□□□ -1.42
HDAC3-209ENST00000486618 ADCY4Q8NFM4 1077 aa6.2□□□□□ -1.42
HDAC3-209ENST00000486618 PGAM5Q96HS1 289 aa6.2□□□□□ -1.42
HDAC3-209ENST00000486618 JMJD8Q96S16 334 aa6.2□□□□□ -1.42
HDAC3-209ENST00000486618 EGFL8Q99944 293 aa6.2□□□□□ -1.42
HDAC3-209ENST00000486618 TTYH2Q9BSA4 534 aa6.2□□□□□ -1.42
HDAC3-209ENST00000486618 DEFB126Q9BYW3 111 aa6.2□□□□□ -1.42
HDAC3-209ENST00000486618 DDX47Q9H0S4 455 aaKnown RBP6.2□□□□□ -1.42
HDAC3-209ENST00000486618 DEFB127Q9H1M4 99 aa6.2□□□□□ -1.42
HDAC3-209ENST00000486618 GOLPH3Q9H4A6 298 aa6.2□□□□□ -1.42
HDAC3-209ENST00000486618 FN3KRPQ9HA64 309 aa6.2□□□□□ -1.42
HDAC3-209ENST00000486618 C19orf12Q9NSK7 152 aa6.2□□□□□ -1.42
HDAC3-209ENST00000486618 SLC2A6Q9UGQ3 507 aa6.2□□□□□ -1.42
HDAC3-209ENST00000486618 HAO1Q9UJM8 370 aa6.2□□□□□ -1.42
HDAC3-209ENST00000486618 ZNF229Q9UJW7 825 aa6.2□□□□□ -1.42
HDAC3-209ENST00000486618 LRRC42Q9Y546 428 aa6.2□□□□□ -1.42
HDAC3-209ENST00000486618 DUSP10Q9Y6W6 482 aa6.2□□□□□ -1.42
HDAC3-209ENST00000486618 A0A0A6YYH2 397 aa6.19□□□□□ -1.42
HDAC3-209ENST00000486618 OR2W5A6NFC9 320 aa6.19□□□□□ -1.42
HDAC3-209ENST00000486618 EFCAB10A6NFE3 127 aa6.19□□□□□ -1.42
HDAC3-209ENST00000486618 A6NJ64 397 aa6.19□□□□□ -1.42
HDAC3-209ENST00000486618 A6NNC1 897 aa6.19□□□□□ -1.42
HDAC3-209ENST00000486618 KRTAP9-7A8MTY7 169 aa6.19□□□□□ -1.42
HDAC3-209ENST00000486618 ARHGEF33A8MVX0 844 aa6.19□□□□□ -1.42
HDAC3-209ENST00000486618 E5RI56 91 aa6.19□□□□□ -1.42
HDAC3-209ENST00000486618 H3BMM5 538 aa6.19□□□□□ -1.42
HDAC3-209ENST00000486618 CCDC188H7C350 402 aa6.19□□□□□ -1.42
HDAC3-209ENST00000486618 SGK494L7N484 410 aa6.19□□□□□ -1.42
HDAC3-209ENST00000486618 CRYZL1O95825 349 aa6.19□□□□□ -1.42
HDAC3-209ENST00000486618 HEXAP06865 529 aa6.19□□□□□ -1.42
HDAC3-209ENST00000486618 FABP1P07148 127 aa6.19□□□□□ -1.42
HDAC3-209ENST00000486618 KRT16P08779 473 aa6.19□□□□□ -1.42
HDAC3-209ENST00000486618 TYK2P29597 1187 aa6.19□□□□□ -1.42
HDAC3-209ENST00000486618 CDKN2CP42773 168 aa6.19□□□□□ -1.42
HDAC3-209ENST00000486618 GSTM5P46439 218 aa6.19□□□□□ -1.42
HDAC3-209ENST00000486618 BCAP31P51572 246 aa6.19□□□□□ -1.42
HDAC3-209ENST00000486618 CCR4P51679 360 aa6.19□□□□□ -1.42
HDAC3-209ENST00000486618 RPL23AP62750 156 aaKnown RBP6.19□□□□□ -1.42
HDAC3-209ENST00000486618 PPIAP62937 165 aaKnown RBP6.19□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms