RNA–Protein interactions for RNA: ENST00000485080.6

SREBF1-213, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 5

Gene SREBF1, Length 1,230 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-213ENST00000485080 OR10A6Q8NH74 314 aa15.97■□□□□ 0.15
SREBF1-213ENST00000485080 OR10D3Q8NH80 312 aa15.97■□□□□ 0.15
SREBF1-213ENST00000485080 SLC25A43Q8WUT9 341 aaPredicted RBP15.97■□□□□ 0.15
SREBF1-213ENST00000485080 SMPDL3BQ92485 455 aa15.97■□□□□ 0.15
SREBF1-213ENST00000485080 CMTM5Q96DZ9 223 aa15.97■□□□□ 0.15
SREBF1-213ENST00000485080 GPATCH1Q9BRR8 931 aaKnown RBP15.97■□□□□ 0.15
SREBF1-213ENST00000485080 SLC39A3Q9BRY0 314 aa15.97■□□□□ 0.15
SREBF1-213ENST00000485080 SFXN3Q9BWM7 321 aa15.97■□□□□ 0.15
SREBF1-213ENST00000485080 PINK1Q9BXM7 581 aa15.97■□□□□ 0.15
SREBF1-213ENST00000485080 RSPO3Q9BXY4 272 aaPredicted RBP15.97■□□□□ 0.15
SREBF1-213ENST00000485080 ADAM19Q9H013 955 aa15.97■□□□□ 0.15
SREBF1-213ENST00000485080 EVA1AQ9H8M9 152 aa15.97■□□□□ 0.15
SREBF1-213ENST00000485080 RNF122Q9H9V4 155 aa15.97■□□□□ 0.15
SREBF1-213ENST00000485080 KCNJ16Q9NPI9 418 aa15.97■□□□□ 0.15
SREBF1-213ENST00000485080 SERINC1Q9NRX5 453 aa15.97■□□□□ 0.15
SREBF1-213ENST00000485080 ANGPT4Q9Y264 503 aa15.97■□□□□ 0.15
SREBF1-213ENST00000485080 ARL2BPQ9Y2Y0 163 aa15.97■□□□□ 0.15
SREBF1-213ENST00000485080 PRORSD1PA6NEY8 169 aa15.96■□□□□ 0.15
SREBF1-213ENST00000485080 PRSS44E7EML9 344 aa15.96■□□□□ 0.15
SREBF1-213ENST00000485080 EIF1AYO14602 144 aaKnown RBP15.96■□□□□ 0.15
SREBF1-213ENST00000485080 AP3D1O14617 1153 aa15.96■□□□□ 0.15
SREBF1-213ENST00000485080 SHOX2O60902 331 aaPredicted RBP15.96■□□□□ 0.15
SREBF1-213ENST00000485080 TMIGD3P0DMS9 266 aaPredicted RBP15.96■□□□□ 0.15
SREBF1-213ENST00000485080 RYKP34925 604 aa15.96■□□□□ 0.15
SREBF1-213ENST00000485080 IDH2P48735 452 aaKnown RBP15.96■□□□□ 0.15
SREBF1-213ENST00000485080 MERTKQ12866 999 aa15.96■□□□□ 0.15
SREBF1-213ENST00000485080 ARPINQ7Z6K5 226 aa15.96■□□□□ 0.15
SREBF1-213ENST00000485080 POU5F2Q8N7G0 328 aa15.96■□□□□ 0.15
SREBF1-213ENST00000485080 ZNF563Q8TA94 476 aa15.96■□□□□ 0.15
SREBF1-213ENST00000485080 RCN3Q96D15 328 aa15.96■□□□□ 0.15
SREBF1-213ENST00000485080 ZNF845Q96IR2 970 aaPredicted RBP15.96■□□□□ 0.15
SREBF1-213ENST00000485080 HOPXQ9BPY8 73 aaPredicted RBP15.96■□□□□ 0.15
SREBF1-213ENST00000485080 TRIM8Q9BZR9 551 aa15.96■□□□□ 0.15
SREBF1-213ENST00000485080 EFCAB1Q9HAE3 211 aa15.96■□□□□ 0.15
SREBF1-213ENST00000485080 TIGARQ9NQ88 270 aa15.96■□□□□ 0.15
SREBF1-213ENST00000485080 SPIN1Q9Y657 262 aaPredicted RBP15.96■□□□□ 0.15
SREBF1-213ENST00000485080 GCM2O75603 506 aaPredicted RBP15.95■□□□□ 0.14
SREBF1-213ENST00000485080 MFN2O95140 757 aa15.95■□□□□ 0.14
SREBF1-213ENST00000485080 SHC1P29353 583 aa15.95■□□□□ 0.14
SREBF1-213ENST00000485080 EIF1AXP47813 144 aaKnown RBP15.95■□□□□ 0.14
SREBF1-213ENST00000485080 CARD18P57730 90 aa15.95■□□□□ 0.14
SREBF1-213ENST00000485080 VEZF1Q14119 521 aa15.95■□□□□ 0.14
SREBF1-213ENST00000485080 PON3Q15166 354 aa15.95■□□□□ 0.14
SREBF1-213ENST00000485080 GUSBP1Q15486 140 aa15.95■□□□□ 0.14
SREBF1-213ENST00000485080 SGCBQ16585 318 aa15.95■□□□□ 0.14
SREBF1-213ENST00000485080 VMACQ2NL98 169 aa15.95■□□□□ 0.14
SREBF1-213ENST00000485080 TMEM176BQ3YBM2 270 aaPredicted RBP15.95■□□□□ 0.14
SREBF1-213ENST00000485080 RABL3Q5HYI8 236 aa15.95■□□□□ 0.14
SREBF1-213ENST00000485080 INTS11Q5TA45 600 aaKnown RBP15.95■□□□□ 0.14
SREBF1-213ENST00000485080 FAM91A1Q658Y4 838 aa15.95■□□□□ 0.14
SREBF1-213ENST00000485080 HBMQ6B0K9 141 aa15.95■□□□□ 0.14
SREBF1-213ENST00000485080 C8orf82Q6P1X6 216 aaPredicted RBP15.95■□□□□ 0.14
SREBF1-213ENST00000485080 CCDC80Q76M96 950 aa15.95■□□□□ 0.14
SREBF1-213ENST00000485080 PATL1Q86TB9 770 aaKnown RBP15.95■□□□□ 0.14
SREBF1-213ENST00000485080 ADGRG3Q86Y34 549 aa15.95■□□□□ 0.14
SREBF1-213ENST00000485080 FNDC9Q8TBE3 224 aa15.95■□□□□ 0.14
SREBF1-213ENST00000485080 FIG4Q92562 907 aa15.95■□□□□ 0.14
SREBF1-213ENST00000485080 OSTF1Q92882 214 aa15.95■□□□□ 0.14
SREBF1-213ENST00000485080 REXO5Q96IC2 774 aaKnown RBP15.95■□□□□ 0.14
SREBF1-213ENST00000485080 ZNF583Q96ND8 569 aa15.95■□□□□ 0.14
SREBF1-213ENST00000485080 CCT8L2Q96SF2 557 aa15.95■□□□□ 0.14
SREBF1-213ENST00000485080 ECSITQ9BQ95 431 aa15.95■□□□□ 0.14
SREBF1-213ENST00000485080 TMEM185BQ9H7F4 350 aa15.95■□□□□ 0.14
SREBF1-213ENST00000485080 JKAMPQ9P055 326 aa15.95■□□□□ 0.14
SREBF1-213ENST00000485080 CHRNA9Q9UGM1 479 aa15.95■□□□□ 0.14
SREBF1-213ENST00000485080 MCTS1Q9ULC4 181 aaKnown RBP15.95■□□□□ 0.14
SREBF1-213ENST00000485080 NAV2Q8IVL1 2488 aa15.94■□□□□ 0.14
SREBF1-213ENST00000485080 HCFC1P51610 2035 aa15.94■□□□□ 0.14
SREBF1-213ENST00000485080 TNFSF11O14788 317 aa15.94■□□□□ 0.14
SREBF1-213ENST00000485080 ZNF208O43345 1280 aa15.94■□□□□ 0.14
SREBF1-213ENST00000485080 IGFBP2P18065 325 aa15.94■□□□□ 0.14
SREBF1-213ENST00000485080 GRNP28799 593 aaKnown RBP15.94■□□□□ 0.14
SREBF1-213ENST00000485080 SFTPDP35247 375 aa15.94■□□□□ 0.14
SREBF1-213ENST00000485080 POLR2HP52434 150 aaKnown RBP15.94■□□□□ 0.14
SREBF1-213ENST00000485080 RAC3P60763 192 aa15.94■□□□□ 0.14
SREBF1-213ENST00000485080 SP5Q6BEB4 398 aaPredicted RBP15.94■□□□□ 0.14
SREBF1-213ENST00000485080 WBP2NLQ6ICG8 309 aa15.94■□□□□ 0.14
SREBF1-213ENST00000485080 ERICH5Q6P6B1 374 aa15.94■□□□□ 0.14
SREBF1-213ENST00000485080 P4HA3Q7Z4N8 544 aa15.94■□□□□ 0.14
SREBF1-213ENST00000485080 ARMC8Q8IUR7 673 aa15.94■□□□□ 0.14
SREBF1-213ENST00000485080 RELL2Q8NC24 303 aaPredicted RBP15.94■□□□□ 0.14
SREBF1-213ENST00000485080 CPNE4Q96A23 557 aaPredicted RBP15.94■□□□□ 0.14
SREBF1-213ENST00000485080 SPOCK3Q9BQ16 436 aa15.94■□□□□ 0.14
SREBF1-213ENST00000485080 UCK2Q9BZX2 261 aa15.94■□□□□ 0.14
SREBF1-213ENST00000485080 ENKD1Q9H0I2 346 aa15.94■□□□□ 0.14
SREBF1-213ENST00000485080 COQ10BQ9H8M1 238 aa15.94■□□□□ 0.14
SREBF1-213ENST00000485080 CTPS2Q9NRF8 586 aa15.94■□□□□ 0.14
SREBF1-213ENST00000485080 GLRX2Q9NS18 164 aa15.94■□□□□ 0.14
SREBF1-213ENST00000485080 OSGIN1Q9UJX0 560 aa15.94■□□□□ 0.14
SREBF1-213ENST00000485080 ABCA12Q86UK0 2595 aa15.94■□□□□ 0.14
SREBF1-213ENST00000485080 DCHS2Q6V1P9 2916 aa15.94■□□□□ 0.14
SREBF1-213ENST00000485080 SYT5O00445 386 aa15.93■□□□□ 0.14
SREBF1-213ENST00000485080 DNPH1O43598 174 aa15.93■□□□□ 0.14
SREBF1-213ENST00000485080 CXCL13O43927 109 aa15.93■□□□□ 0.14
SREBF1-213ENST00000485080 TNFSF13O75888 250 aa15.93■□□□□ 0.14
SREBF1-213ENST00000485080 DCTN3O75935 186 aa15.93■□□□□ 0.14
SREBF1-213ENST00000485080 FAM107AO95990 144 aa15.93■□□□□ 0.14
SREBF1-213ENST00000485080 OPN1LWP04000 364 aa15.93■□□□□ 0.14
SREBF1-213ENST00000485080 C8BP07358 591 aa15.93■□□□□ 0.14
SREBF1-213ENST00000485080 GKN3PP0CG01 181 aa15.93■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms