RNA–Protein interactions for RNA: ENST00000483871.6

SRSF6-202, Transcript of serine and arginine rich splicing factor 6, humanhuman

TSL 2

Gene SRSF6, Length 1,680 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF6-202ENST00000483871 MAGEA2P43356 314 aa12.77□□□□□ -0.37
SRSF6-202ENST00000483871 PPP1R8Q12972 351 aaKnown RBP12.77□□□□□ -0.37
SRSF6-202ENST00000483871 ALG10BQ5I7T1 473 aa12.77□□□□□ -0.37
SRSF6-202ENST00000483871 GRINAQ7Z429 371 aa12.77□□□□□ -0.37
SRSF6-202ENST00000483871 GDF7Q7Z4P5 450 aa12.77□□□□□ -0.37
SRSF6-202ENST00000483871 NKAIN4Q8IVV8 208 aa12.77□□□□□ -0.37
SRSF6-202ENST00000483871 GTPBP8Q8N3Z3 284 aaPredicted RBP12.77□□□□□ -0.37
SRSF6-202ENST00000483871 PAPD5Q8NDF8 572 aaKnown RBP12.77□□□□□ -0.37
SRSF6-202ENST00000483871 ATP6V1C2Q8NEY4 427 aa12.77□□□□□ -0.37
SRSF6-202ENST00000483871 NR4A3Q92570 626 aa12.77□□□□□ -0.37
SRSF6-202ENST00000483871 DNAJA3Q96EY1 480 aa12.77□□□□□ -0.37
SRSF6-202ENST00000483871 MRGPRX4Q96LA9 322 aa12.77□□□□□ -0.37
SRSF6-202ENST00000483871 PRRC1Q96M27 445 aa12.77□□□□□ -0.37
SRSF6-202ENST00000483871 PIGQQ9BRB3 760 aa12.77□□□□□ -0.37
SRSF6-202ENST00000483871 TMEM185BQ9H7F4 350 aa12.77□□□□□ -0.37
SRSF6-202ENST00000483871 FAM32AQ9Y421 112 aaKnown RBP12.77□□□□□ -0.37
SRSF6-202ENST00000483871 TRGV5A0A0B4J1U4 118 aa12.76□□□□□ -0.37
SRSF6-202ENST00000483871 TRAPPC13A5PLN9 417 aa12.76□□□□□ -0.37
SRSF6-202ENST00000483871 H3BML4 177 aa12.76□□□□□ -0.37
SRSF6-202ENST00000483871 FKBP6O75344 327 aa12.76□□□□□ -0.37
SRSF6-202ENST00000483871 TIPRLO75663 272 aa12.76□□□□□ -0.37
SRSF6-202ENST00000483871 PRB1P04280 392 aa12.76□□□□□ -0.37
SRSF6-202ENST00000483871 GFRA1P56159 465 aa12.76□□□□□ -0.37
SRSF6-202ENST00000483871 LSM11P83369 360 aaKnown RBP eCLIP12.76□□□□□ -0.37
SRSF6-202ENST00000483871 GLYR1Q49A26 553 aaPredicted RBP12.76□□□□□ -0.37
SRSF6-202ENST00000483871 ZNF613Q6PF04 617 aa12.76□□□□□ -0.37
SRSF6-202ENST00000483871 ULK3Q6PHR2 472 aa12.76□□□□□ -0.37
SRSF6-202ENST00000483871 WDR88Q6ZMY6 472 aa12.76□□□□□ -0.37
SRSF6-202ENST00000483871 TRILQ7L0X0 811 aa12.76□□□□□ -0.37
SRSF6-202ENST00000483871 PIWIL3Q7Z3Z3 882 aaKnown RBP12.76□□□□□ -0.37
SRSF6-202ENST00000483871 ATG4DQ86TL0 474 aaPredicted RBP12.76□□□□□ -0.37
SRSF6-202ENST00000483871 P3H2Q8IVL5 708 aa12.76□□□□□ -0.37
SRSF6-202ENST00000483871 OR52J3Q8NH60 311 aa12.76□□□□□ -0.37
SRSF6-202ENST00000483871 NEIL3Q8TAT5 605 aa12.76□□□□□ -0.37
SRSF6-202ENST00000483871 DUS3LQ96G46 650 aaKnown RBP12.76□□□□□ -0.37
SRSF6-202ENST00000483871 SFXN2Q96NB2 322 aa12.76□□□□□ -0.37
SRSF6-202ENST00000483871 PRSS27Q9BQR3 290 aa12.76□□□□□ -0.37
SRSF6-202ENST00000483871 EXO5Q9H790 373 aa12.76□□□□□ -0.37
SRSF6-202ENST00000483871 NMNAT1Q9HAN9 279 aaPredicted RBP12.76□□□□□ -0.37
SRSF6-202ENST00000483871 ACAD8Q9UKU7 415 aa12.76□□□□□ -0.37
SRSF6-202ENST00000483871 TESMINQ9Y4I5 508 aa12.76□□□□□ -0.37
SRSF6-202ENST00000483871 AP4S1Q9Y587 144 aa12.76□□□□□ -0.37
SRSF6-202ENST00000483871 IGSF10Q6WRI0 2623 aa12.76□□□□□ -0.37
SRSF6-202ENST00000483871 MPDZO75970 2070 aa12.75□□□□□ -0.37
SRSF6-202ENST00000483871 TMED7-TICAM2A0A0A6YYA0 188 aa12.75□□□□□ -0.37
SRSF6-202ENST00000483871 H0YC42 278 aa12.75□□□□□ -0.37
SRSF6-202ENST00000483871 IGHG3P01860 377 aa12.75□□□□□ -0.37
SRSF6-202ENST00000483871 ITGA2P17301 1181 aa12.75□□□□□ -0.37
SRSF6-202ENST00000483871 BMP7P18075 431 aa12.75□□□□□ -0.37
SRSF6-202ENST00000483871 ADH6P28332 368 aa12.75□□□□□ -0.37
SRSF6-202ENST00000483871 EIF1P41567 113 aaKnown RBP12.75□□□□□ -0.37
SRSF6-202ENST00000483871 POLR2HP52434 150 aaKnown RBP12.75□□□□□ -0.37
SRSF6-202ENST00000483871 TPD52P55327 224 aaPredicted RBP12.75□□□□□ -0.37
SRSF6-202ENST00000483871 DLX5P56178 289 aa12.75□□□□□ -0.37
SRSF6-202ENST00000483871 DCST1Q5T197 706 aa12.75□□□□□ -0.37
SRSF6-202ENST00000483871 ZNF605Q86T29 641 aa12.75□□□□□ -0.37
SRSF6-202ENST00000483871 DNAJA4Q8WW22 397 aaPredicted RBP12.75□□□□□ -0.37
SRSF6-202ENST00000483871 SMPDL3BQ92485 455 aa12.75□□□□□ -0.37
SRSF6-202ENST00000483871 POP5Q969H6 163 aaKnown RBP12.75□□□□□ -0.37
SRSF6-202ENST00000483871 SLC38A4Q969I6 547 aa12.75□□□□□ -0.37
SRSF6-202ENST00000483871 PIP5K1AQ99755 562 aa12.75□□□□□ -0.37
SRSF6-202ENST00000483871 FNDC11Q9BVV2 318 aa12.75□□□□□ -0.37
SRSF6-202ENST00000483871 MAN2C1Q9NTJ4 1040 aa12.75□□□□□ -0.37
SRSF6-202ENST00000483871 SPRR3Q9UBC9 169 aa12.75□□□□□ -0.37
SRSF6-202ENST00000483871 RALYQ9UKM9 306 aaKnown RBP12.75□□□□□ -0.37
SRSF6-202ENST00000483871 TMED7Q9Y3B3 224 aa12.75□□□□□ -0.37
SRSF6-202ENST00000483871 COL6A6A6NMZ7 2263 aa12.75□□□□□ -0.37
SRSF6-202ENST00000483871 KALRNO60229 2985 aa12.75□□□□□ -0.37
SRSF6-202ENST00000483871 A0A1B0GTH9 108 aa12.74□□□□□ -0.37
SRSF6-202ENST00000483871 TMEM72A0PK05 275 aa12.74□□□□□ -0.37
SRSF6-202ENST00000483871 ZC3H12DA2A288 527 aaKnown RBP12.74□□□□□ -0.37
SRSF6-202ENST00000483871 C7orf72A4D263 438 aa12.74□□□□□ -0.37
SRSF6-202ENST00000483871 H3BNX3 289 aa12.74□□□□□ -0.37
SRSF6-202ENST00000483871 CHP2O43745 196 aa12.74□□□□□ -0.37
SRSF6-202ENST00000483871 OR5F1O95221 314 aa12.74□□□□□ -0.37
SRSF6-202ENST00000483871 CST1P01037 141 aa12.74□□□□□ -0.37
SRSF6-202ENST00000483871 CXCR1P25024 350 aa12.74□□□□□ -0.37
SRSF6-202ENST00000483871 SHC1P29353 583 aa12.74□□□□□ -0.37
SRSF6-202ENST00000483871 RRM2P31350 389 aa12.74□□□□□ -0.37
SRSF6-202ENST00000483871 APOBEC1P41238 236 aaKnown RBP12.74□□□□□ -0.37
SRSF6-202ENST00000483871 TDGF1P3P51864 188 aa12.74□□□□□ -0.37
SRSF6-202ENST00000483871 ELF3P78545 371 aaPredicted RBP12.74□□□□□ -0.37
SRSF6-202ENST00000483871 ST3GAL3Q11203 375 aa12.74□□□□□ -0.37
SRSF6-202ENST00000483871 CYP4Z1Q86W10 505 aa12.74□□□□□ -0.37
SRSF6-202ENST00000483871 LILRA2Q8N149 483 aa12.74□□□□□ -0.37
SRSF6-202ENST00000483871 LSM14AQ8ND56 463 aaKnown RBP12.74□□□□□ -0.37
SRSF6-202ENST00000483871 GPR137Q96N19 417 aa12.74□□□□□ -0.37
SRSF6-202ENST00000483871 BARD1Q99728 777 aaKnown RBP12.74□□□□□ -0.37
SRSF6-202ENST00000483871 OR11A1Q9GZK7 315 aa12.74□□□□□ -0.37
SRSF6-202ENST00000483871 PLSCR2Q9NRY7 297 aa12.74□□□□□ -0.37
SRSF6-202ENST00000483871 ARMC1Q9NVT9 282 aa12.74□□□□□ -0.37
SRSF6-202ENST00000483871 VNN3Q9NY84 501 aa12.74□□□□□ -0.37
SRSF6-202ENST00000483871 CHRNA9Q9UGM1 479 aa12.74□□□□□ -0.37
SRSF6-202ENST00000483871 KMT2BQ9UMN6 2715 aaPredicted RBP12.74□□□□□ -0.37
SRSF6-202ENST00000483871 ZFYVE26Q68DK2 2539 aa12.74□□□□□ -0.37
SRSF6-202ENST00000483871 GTF3C1Q12789 2109 aa12.74□□□□□ -0.37
SRSF6-202ENST00000483871 A0A087WUJ7 227 aa12.73□□□□□ -0.37
SRSF6-202ENST00000483871 ELOA3DA6NLF2 546 aaPredicted RBP12.73□□□□□ -0.37
SRSF6-202ENST00000483871 SUSD5O60279 629 aa12.73□□□□□ -0.37
SRSF6-202ENST00000483871 KRT36O76013 467 aa12.73□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms