RNA–Protein interactions for RNA: ENST00000482558.5

SNX13-208, Transcript of sorting nexin 13, humanhuman

TSL 2

Gene SNX13, Length 1,139 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-208ENST00000482558 EGFP01133 1207 aa7.13□□□□□ -1.27
SNX13-208ENST00000482558 GASTP01350 101 aa7.13□□□□□ -1.27
SNX13-208ENST00000482558 C1QCP02747 245 aa7.13□□□□□ -1.27
SNX13-208ENST00000482558 ALPPP05187 535 aa7.13□□□□□ -1.27
SNX13-208ENST00000482558 HMGN2P05204 90 aaKnown RBP7.13□□□□□ -1.27
SNX13-208ENST00000482558 SMIM10L1P0DMW3 83 aa7.13□□□□□ -1.27
SNX13-208ENST00000482558 CD36P16671 472 aa7.13□□□□□ -1.27
SNX13-208ENST00000482558 CD6P30203 668 aa7.13□□□□□ -1.27
SNX13-208ENST00000482558 ACTR1BP42025 376 aa7.13□□□□□ -1.27
SNX13-208ENST00000482558 ENTPD1P49961 510 aa7.13□□□□□ -1.27
SNX13-208ENST00000482558 XKP51811 444 aa7.13□□□□□ -1.27
SNX13-208ENST00000482558 SMSP52788 366 aa7.13□□□□□ -1.27
SNX13-208ENST00000482558 ACTR1AP61163 376 aa7.13□□□□□ -1.27
SNX13-208ENST00000482558 ZXDAP98168 799 aa7.13□□□□□ -1.27
SNX13-208ENST00000482558 TNFRSF17Q02223 184 aa7.13□□□□□ -1.27
SNX13-208ENST00000482558 CD69Q07108 199 aa7.13□□□□□ -1.27
SNX13-208ENST00000482558 ST3GAL3Q11203 375 aa7.13□□□□□ -1.27
SNX13-208ENST00000482558 ST3GAL4Q11206 333 aa7.13□□□□□ -1.27
SNX13-208ENST00000482558 BIKQ13323 160 aa7.13□□□□□ -1.27
SNX13-208ENST00000482558 KRR1Q13601 381 aaKnown RBP7.13□□□□□ -1.27
SNX13-208ENST00000482558 C1DQ13901 141 aaKnown RBP7.13□□□□□ -1.27
SNX13-208ENST00000482558 LARS2Q15031 903 aaKnown RBP7.13□□□□□ -1.27
SNX13-208ENST00000482558 TRAM2Q15035 370 aa7.13□□□□□ -1.27
SNX13-208ENST00000482558 FAM214AQ32MH5 1076 aa7.13□□□□□ -1.27
SNX13-208ENST00000482558 KLHL22Q53GT1 634 aa7.13□□□□□ -1.27
SNX13-208ENST00000482558 ENTPD8Q5MY95 495 aa7.13□□□□□ -1.27
SNX13-208ENST00000482558 C12orf73Q69YU5 71 aa7.13□□□□□ -1.27
SNX13-208ENST00000482558 C1orf94Q6P1W5 598 aa7.13□□□□□ -1.27
SNX13-208ENST00000482558 RRM2BQ7LG56 351 aa7.13□□□□□ -1.27
SNX13-208ENST00000482558 C16orf62Q7Z3J2 963 aa7.13□□□□□ -1.27
SNX13-208ENST00000482558 TMEM200AQ86VY9 491 aa7.13□□□□□ -1.27
SNX13-208ENST00000482558 OOSP2Q86WS3 158 aa7.13□□□□□ -1.27
SNX13-208ENST00000482558 CCDC71Q8IV32 467 aaPredicted RBP7.13□□□□□ -1.27
SNX13-208ENST00000482558 MAML2Q8IZL2 1156 aaPredicted RBP7.13□□□□□ -1.27
SNX13-208ENST00000482558 CYP4Z2PQ8N1L4 340 aa7.13□□□□□ -1.27
SNX13-208ENST00000482558 DTX3Q8N9I9 347 aa7.13□□□□□ -1.27
SNX13-208ENST00000482558 GPR32P1Q8NGA4 272 aa7.13□□□□□ -1.27
SNX13-208ENST00000482558 OR4E2Q8NGC2 313 aa7.13□□□□□ -1.27
SNX13-208ENST00000482558 OR9Q1Q8NGQ5 310 aa7.13□□□□□ -1.27
SNX13-208ENST00000482558 OR8K5Q8NH50 307 aa7.13□□□□□ -1.27
SNX13-208ENST00000482558 ZNF675Q8TD23 568 aa7.13□□□□□ -1.27
SNX13-208ENST00000482558 GNPDA2Q8TDQ7 276 aa7.13□□□□□ -1.27
SNX13-208ENST00000482558 OR1E3Q8WZA6 343 aa7.13□□□□□ -1.27
SNX13-208ENST00000482558 TANKQ92844 425 aa7.13□□□□□ -1.27
SNX13-208ENST00000482558 KLK6Q92876 244 aa7.13□□□□□ -1.27
SNX13-208ENST00000482558 INTS12Q96CB8 462 aaKnown RBP7.13□□□□□ -1.27
SNX13-208ENST00000482558 ZHX1-C8orf76Q96EF9 292 aa7.13□□□□□ -1.27
SNX13-208ENST00000482558 SMIM10Q96HG1 83 aa7.13□□□□□ -1.27
SNX13-208ENST00000482558 PGAM5Q96HS1 289 aa7.13□□□□□ -1.27
SNX13-208ENST00000482558 PLEKHA8Q96JA3 519 aa7.13□□□□□ -1.27
SNX13-208ENST00000482558 ZNF681Q96N22 645 aa7.13□□□□□ -1.27
SNX13-208ENST00000482558 NIPSNAP1Q9BPW8 284 aa7.13□□□□□ -1.27
SNX13-208ENST00000482558 NUDT22Q9BRQ3 303 aa7.13□□□□□ -1.27
SNX13-208ENST00000482558 POLDIP3Q9BY77 421 aaKnown RBP7.13□□□□□ -1.27
SNX13-208ENST00000482558 NAA50Q9GZZ1 169 aaKnown RBP7.13□□□□□ -1.27
SNX13-208ENST00000482558 C11orf54Q9H0W9 315 aaPredicted RBP7.13□□□□□ -1.27
SNX13-208ENST00000482558 TTYH1Q9H313 450 aaPredicted RBP7.13□□□□□ -1.27
SNX13-208ENST00000482558 SYNPO2LQ9H987 977 aa7.13□□□□□ -1.27
SNX13-208ENST00000482558 FZD3Q9NPG1 666 aa7.13□□□□□ -1.27
SNX13-208ENST00000482558 FSCN3Q9NQT6 498 aa7.13□□□□□ -1.27
SNX13-208ENST00000482558 ZNF226Q9NYT6 803 aa7.13□□□□□ -1.27
SNX13-208ENST00000482558 CCDC59Q9P031 241 aaKnown RBP7.13□□□□□ -1.27
SNX13-208ENST00000482558 MMP17Q9ULZ9 603 aa7.13□□□□□ -1.27
SNX13-208ENST00000482558 SATB2Q9UPW6 733 aa7.13□□□□□ -1.27
SNX13-208ENST00000482558 ERGIC3Q9Y282 383 aa7.13□□□□□ -1.27
SNX13-208ENST00000482558 ATG4BQ9Y4P1 393 aa7.13□□□□□ -1.27
SNX13-208ENST00000482558 HEATR5BQ9P2D3 2071 aa7.13□□□□□ -1.27
SNX13-208ENST00000482558 PNMA8CA0A1B0GUJ8 204 aa7.12□□□□□ -1.27
SNX13-208ENST00000482558 HYKKA2RU49 373 aa7.12□□□□□ -1.27
SNX13-208ENST00000482558 ISPDA4D126 451 aa7.12□□□□□ -1.27
SNX13-208ENST00000482558 EPOPA6NHQ4 379 aa7.12□□□□□ -1.27
SNX13-208ENST00000482558 OR6C76A6NM76 312 aa7.12□□□□□ -1.27
SNX13-208ENST00000482558 EFCAB9A8MZ26 197 aa7.12□□□□□ -1.27
SNX13-208ENST00000482558 C10orf142B7Z368 130 aa7.12□□□□□ -1.27
SNX13-208ENST00000482558 FFAR1O14842 300 aa7.12□□□□□ -1.27
SNX13-208ENST00000482558 DHHO43323 396 aa7.12□□□□□ -1.27
SNX13-208ENST00000482558 OR5F1O95221 314 aa7.12□□□□□ -1.27
SNX13-208ENST00000482558 SEMA4FO95754 770 aa7.12□□□□□ -1.27
SNX13-208ENST00000482558 CFIP05156 583 aa7.12□□□□□ -1.27
SNX13-208ENST00000482558 ALOX5P09917 674 aa7.12□□□□□ -1.27
SNX13-208ENST00000482558 CPN2P22792 545 aa7.12□□□□□ -1.27
SNX13-208ENST00000482558 EPHA2P29317 976 aa7.12□□□□□ -1.27
SNX13-208ENST00000482558 CD40LGP29965 261 aa7.12□□□□□ -1.27
SNX13-208ENST00000482558 PEBP1P30086 187 aaKnown RBP7.12□□□□□ -1.27
SNX13-208ENST00000482558 MAT2AP31153 395 aaKnown RBP7.12□□□□□ -1.27
SNX13-208ENST00000482558 CSTF2P33240 577 aaKnown RBP eCLIP7.12□□□□□ -1.27
SNX13-208ENST00000482558 THBS2P35442 1172 aa7.12□□□□□ -1.27
SNX13-208ENST00000482558 SOX6P35712 828 aa7.12□□□□□ -1.27
SNX13-208ENST00000482558 MAP2K4P45985 399 aa7.12□□□□□ -1.27
SNX13-208ENST00000482558 TPMTP51580 245 aa7.12□□□□□ -1.27
SNX13-208ENST00000482558 BMXP51813 675 aa7.12□□□□□ -1.27
SNX13-208ENST00000482558 DGKEP52429 567 aa7.12□□□□□ -1.27
SNX13-208ENST00000482558 LIM2P55344 173 aa7.12□□□□□ -1.27
SNX13-208ENST00000482558 PPP2CBP62714 309 aa7.12□□□□□ -1.27
SNX13-208ENST00000482558 PPP2CAP67775 309 aa7.12□□□□□ -1.27
SNX13-208ENST00000482558 BTN3A2P78410 334 aa7.12□□□□□ -1.27
SNX13-208ENST00000482558 GANABQ14697 944 aaKnown RBP7.12□□□□□ -1.27
SNX13-208ENST00000482558 SPCS2Q15005 226 aa7.12□□□□□ -1.27
SNX13-208ENST00000482558 MAPK11Q15759 364 aa7.12□□□□□ -1.27
SNX13-208ENST00000482558 SYPL1Q16563 259 aa7.12□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms