RNA–Protein interactions for RNA: ENST00000482158.1

SF3B1-210, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 2

Gene SF3B1, Length 772 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-210ENST00000482158 ANKDD1AQ495B1 522 aa3.94□□□□□ -1.78
SF3B1-210ENST00000482158 CCDC152Q4G0S7 254 aa3.94□□□□□ -1.78
SF3B1-210ENST00000482158 CCDC137Q6PK04 289 aaKnown RBP3.94□□□□□ -1.78
SF3B1-210ENST00000482158 WDR74Q6RFH5 385 aaPredicted RBP3.94□□□□□ -1.78
SF3B1-210ENST00000482158 UNQ9370/PRO34162Q6UXP9 181 aa3.94□□□□□ -1.78
SF3B1-210ENST00000482158 FAM220AQ7Z4H9 259 aa3.94□□□□□ -1.78
SF3B1-210ENST00000482158 C7orf33Q8WU49 177 aa3.94□□□□□ -1.78
SF3B1-210ENST00000482158 RLN3Q8WXF3 142 aa3.94□□□□□ -1.78
SF3B1-210ENST00000482158 OR51J1Q9H342 316 aa3.94□□□□□ -1.78
SF3B1-210ENST00000482158 SMYD3Q9H7B4 428 aa3.94□□□□□ -1.78
SF3B1-210ENST00000482158 NANSQ9NR45 359 aa3.94□□□□□ -1.78
SF3B1-210ENST00000482158 MARCH5Q9NX47 278 aa3.94□□□□□ -1.78
SF3B1-210ENST00000482158 LCMT1Q9UIC8 334 aa3.94□□□□□ -1.78
SF3B1-210ENST00000482158 KIF16BQ96L93 1317 aa3.94□□□□□ -1.78
SF3B1-210ENST00000482158 H0YCG3 227 aa3.93□□□□□ -1.78
SF3B1-210ENST00000482158 MAGEB3O15480 346 aa3.93□□□□□ -1.78
SF3B1-210ENST00000482158 ZNF264O43296 627 aa3.93□□□□□ -1.78
SF3B1-210ENST00000482158 TPST2O60704 377 aa3.93□□□□□ -1.78
SF3B1-210ENST00000482158 PRG2P13727 222 aa3.93□□□□□ -1.78
SF3B1-210ENST00000482158 ELK1P19419 428 aa3.93□□□□□ -1.78
SF3B1-210ENST00000482158 NTSP30990 170 aa3.93□□□□□ -1.78
SF3B1-210ENST00000482158 GNB2P62879 340 aa3.93□□□□□ -1.78
SF3B1-210ENST00000482158 SLC10A7Q0GE19 358 aa3.93□□□□□ -1.78
SF3B1-210ENST00000482158 CCDC14Q49A88 953 aa3.93□□□□□ -1.78
SF3B1-210ENST00000482158 LCE3EQ5T5B0 92 aa3.93□□□□□ -1.78
SF3B1-210ENST00000482158 ATL3Q6DD88 541 aa3.93□□□□□ -1.78
SF3B1-210ENST00000482158 PRR22Q8IZ63 422 aa3.93□□□□□ -1.78
SF3B1-210ENST00000482158 CLEC4FQ8N1N0 589 aa3.93□□□□□ -1.78
SF3B1-210ENST00000482158 OR2L13Q8N349 312 aa3.93□□□□□ -1.78
SF3B1-210ENST00000482158 STEAP2Q8NFT2 490 aa3.93□□□□□ -1.78
SF3B1-210ENST00000482158 OR52M1Q8NGK5 317 aa3.93□□□□□ -1.78
SF3B1-210ENST00000482158 TRMT10AQ8TBZ6 339 aaKnown RBP3.93□□□□□ -1.78
SF3B1-210ENST00000482158 SMIM14Q96QK8 99 aa3.93□□□□□ -1.78
SF3B1-210ENST00000482158 CCNL2Q96S94 520 aaPredicted RBP3.93□□□□□ -1.78
SF3B1-210ENST00000482158 NICN1Q9BSH3 213 aa3.93□□□□□ -1.78
SF3B1-210ENST00000482158 ABCB10Q9NRK6 738 aa3.93□□□□□ -1.78
SF3B1-210ENST00000482158 SMOXQ9NWM0 555 aa3.93□□□□□ -1.78
SF3B1-210ENST00000482158 DCDC2Q9UHG0 476 aa3.93□□□□□ -1.78
SF3B1-210ENST00000482158 PHF11Q9UIL8 331 aa3.93□□□□□ -1.78
SF3B1-210ENST00000482158 RPH3ALQ9UNE2 315 aa3.93□□□□□ -1.78
SF3B1-210ENST00000482158 MRPS7Q9Y2R9 242 aaKnown RBP3.93□□□□□ -1.78
SF3B1-210ENST00000482158 RLFQ13129 1914 aa3.92□□□□□ -1.78
SF3B1-210ENST00000482158 E7ESA3 106 aa3.92□□□□□ -1.78
SF3B1-210ENST00000482158 CXCL13O43927 109 aa3.92□□□□□ -1.78
SF3B1-210ENST00000482158 PNMTP11086 282 aa3.92□□□□□ -1.78
SF3B1-210ENST00000482158 PCMT1P22061 227 aa3.92□□□□□ -1.78
SF3B1-210ENST00000482158 FGF9P31371 208 aaPredicted RBP3.92□□□□□ -1.78
SF3B1-210ENST00000482158 PTGDSP41222 190 aa3.92□□□□□ -1.78
SF3B1-210ENST00000482158 BIDP55957 195 aa3.92□□□□□ -1.78
SF3B1-210ENST00000482158 SPIBQ01892 262 aa3.92□□□□□ -1.78
SF3B1-210ENST00000482158 MAP2K1Q02750 393 aaPredicted RBP3.92□□□□□ -1.78
SF3B1-210ENST00000482158 CHRNB3Q05901 458 aa3.92□□□□□ -1.78
SF3B1-210ENST00000482158 HERPUD1Q15011 391 aa3.92□□□□□ -1.78
SF3B1-210ENST00000482158 IL17AQ16552 155 aa3.92□□□□□ -1.78
SF3B1-210ENST00000482158 TRIM16LQ309B1 348 aa3.92□□□□□ -1.78
SF3B1-210ENST00000482158 GPRC6AQ5T6X5 926 aa3.92□□□□□ -1.78
SF3B1-210ENST00000482158 ATAD3BQ5T9A4 648 aa3.92□□□□□ -1.78
SF3B1-210ENST00000482158 OTPQ5XKR4 325 aa3.92□□□□□ -1.78
SF3B1-210ENST00000482158 TPGS2Q68CL5 300 aa3.92□□□□□ -1.78
SF3B1-210ENST00000482158 ACOT7LQ6ZUV0 252 aa3.92□□□□□ -1.78
SF3B1-210ENST00000482158 PPP1R42Q7Z4L9 355 aa3.92□□□□□ -1.78
SF3B1-210ENST00000482158 MTURNQ8N3F0 131 aa3.92□□□□□ -1.78
SF3B1-210ENST00000482158 ATP6V0D2Q8N8Y2 350 aa3.92□□□□□ -1.78
SF3B1-210ENST00000482158 TCTEX1D2Q8WW35 142 aa3.92□□□□□ -1.78
SF3B1-210ENST00000482158 CHCHD10Q8WYQ3 142 aaPredicted RBP3.92□□□□□ -1.78
SF3B1-210ENST00000482158 PGLYRP4Q96LB8 373 aa3.92□□□□□ -1.78
SF3B1-210ENST00000482158 ZIM3Q96PE6 472 aa3.92□□□□□ -1.78
SF3B1-210ENST00000482158 CRACR2AQ9BSW2 395 aa3.92□□□□□ -1.78
SF3B1-210ENST00000482158 GORASP2Q9H8Y8 452 aa3.92□□□□□ -1.78
SF3B1-210ENST00000482158 PDFQ9HBH1 243 aa3.92□□□□□ -1.78
SF3B1-210ENST00000482158 UFSP2Q9NUQ7 469 aa3.92□□□□□ -1.78
SF3B1-210ENST00000482158 NUDT15Q9NV35 164 aa3.92□□□□□ -1.78
SF3B1-210ENST00000482158 CELA1Q9UNI1 258 aa3.92□□□□□ -1.78
SF3B1-210ENST00000482158 POLDIP2Q9Y2S7 368 aa3.92□□□□□ -1.78
SF3B1-210ENST00000482158 GMFGO60234 142 aa3.91□□□□□ -1.78
SF3B1-210ENST00000482158 OR10H3O60404 316 aa3.91□□□□□ -1.78
SF3B1-210ENST00000482158 SNNO75324 88 aaPredicted RBP3.91□□□□□ -1.78
SF3B1-210ENST00000482158 CASP4P49662 377 aa3.91□□□□□ -1.78
SF3B1-210ENST00000482158 HNMTP50135 292 aa3.91□□□□□ -1.78
SF3B1-210ENST00000482158 DAP3P51398 398 aaKnown RBP3.91□□□□□ -1.78
SF3B1-210ENST00000482158 UBE2HP62256 183 aa3.91□□□□□ -1.78
SF3B1-210ENST00000482158 CCDC173Q0VFZ6 552 aa3.91□□□□□ -1.78
SF3B1-210ENST00000482158 PTCH1Q13635 1447 aa3.91□□□□□ -1.78
SF3B1-210ENST00000482158 CFAP157Q5JU67 520 aa3.91□□□□□ -1.78
SF3B1-210ENST00000482158 TMEM225Q6GV28 225 aa3.91□□□□□ -1.78
SF3B1-210ENST00000482158 ERI1Q8IV48 349 aaKnown RBP3.91□□□□□ -1.78
SF3B1-210ENST00000482158 VSTM4Q8IW00 320 aa3.91□□□□□ -1.78
SF3B1-210ENST00000482158 NRMQ8IXM6 262 aa3.91□□□□□ -1.78
SF3B1-210ENST00000482158 TMEM252Q8N6L7 170 aa3.91□□□□□ -1.78
SF3B1-210ENST00000482158 OR52I1Q8NGK6 324 aa3.91□□□□□ -1.78
SF3B1-210ENST00000482158 OR1E3Q8WZA6 343 aa3.91□□□□□ -1.78
SF3B1-210ENST00000482158 MARC2Q969Z3 335 aa3.91□□□□□ -1.78
SF3B1-210ENST00000482158 TUBGCP2Q9BSJ2 902 aa3.91□□□□□ -1.78
SF3B1-210ENST00000482158 MAGT1Q9H0U3 335 aa3.91□□□□□ -1.78
SF3B1-210ENST00000482158 POPDC2Q9HBU9 364 aa3.91□□□□□ -1.78
SF3B1-210ENST00000482158 SMPD3Q9NY59 655 aaPredicted RBP3.91□□□□□ -1.78
SF3B1-210ENST00000482158 CD274Q9NZQ7 290 aa3.91□□□□□ -1.78
SF3B1-210ENST00000482158 CLSPNQ9HAW4 1339 aa3.91□□□□□ -1.78
SF3B1-210ENST00000482158 IGKV1D-8A0A087WSZ0 117 aa3.9□□□□□ -1.79
SF3B1-210ENST00000482158 A0A1B0GUS0 222 aa3.9□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms