RNA–Protein interactions for RNA: ENST00000481655.2

CTCFL-210, Transcript of CCCTC-binding factor like, humanhuman

TSL 1 (best) BASIC

Gene CTCFL, Length 1,512 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTCFL-210ENST00000481655 ZNF24P17028 368 aa13.54□□□□□ -0.24
CTCFL-210ENST00000481655 FPR1P21462 350 aa13.54□□□□□ -0.24
CTCFL-210ENST00000481655 FKBP2P26885 142 aaKnown RBP13.54□□□□□ -0.24
CTCFL-210ENST00000481655 ELK4P28324 431 aa13.54□□□□□ -0.24
CTCFL-210ENST00000481655 RBM34P42696 430 aaKnown RBP13.54□□□□□ -0.24
CTCFL-210ENST00000481655 HMGA2P52926 109 aa13.54□□□□□ -0.24
CTCFL-210ENST00000481655 SLC34A1Q06495 639 aa13.54□□□□□ -0.24
CTCFL-210ENST00000481655 FOXF1Q12946 379 aa13.54□□□□□ -0.24
CTCFL-210ENST00000481655 FOXD4Q12950 439 aaPredicted RBP13.54□□□□□ -0.24
CTCFL-210ENST00000481655 RAET1LQ5VY80 246 aa13.54□□□□□ -0.24
CTCFL-210ENST00000481655 C19orf48Q6RUI8 117 aa13.54□□□□□ -0.24
CTCFL-210ENST00000481655 HIPK1Q86Z02 1210 aa13.54□□□□□ -0.24
CTCFL-210ENST00000481655 ZDHHC13Q8IUH4 622 aa13.54□□□□□ -0.24
CTCFL-210ENST00000481655 LILRA2Q8N149 483 aa13.54□□□□□ -0.24
CTCFL-210ENST00000481655 GTPBP8Q8N3Z3 284 aaPredicted RBP13.54□□□□□ -0.24
CTCFL-210ENST00000481655 ICA1LQ8NDH6 482 aa13.54□□□□□ -0.24
CTCFL-210ENST00000481655 PNPLA2Q96AD5 504 aa13.54□□□□□ -0.24
CTCFL-210ENST00000481655 NRBF2Q96F24 287 aa13.54□□□□□ -0.24
CTCFL-210ENST00000481655 U3KQV3 271 aa13.54□□□□□ -0.24
CTCFL-210ENST00000481655 CNTRLQ7Z7A1 2325 aa13.53□□□□□ -0.24
CTCFL-210ENST00000481655 A0A087WUJ7 227 aa13.53□□□□□ -0.24
CTCFL-210ENST00000481655 FAM166BA8MTA8 275 aa13.53□□□□□ -0.24
CTCFL-210ENST00000481655 LINC01387J3KSC0 135 aa13.53□□□□□ -0.24
CTCFL-210ENST00000481655 K7EM74 188 aa13.53□□□□□ -0.24
CTCFL-210ENST00000481655 ERVH48-1M5A8F1 160 aa13.53□□□□□ -0.24
CTCFL-210ENST00000481655 TFECO14948 347 aaPredicted RBP13.53□□□□□ -0.24
CTCFL-210ENST00000481655 HPNP05981 417 aa13.53□□□□□ -0.24
CTCFL-210ENST00000481655 MST1P26927 711 aa13.53□□□□□ -0.24
CTCFL-210ENST00000481655 RFC3P40938 356 aa13.53□□□□□ -0.24
CTCFL-210ENST00000481655 EXOC3L2Q2M3D2 409 aa13.53□□□□□ -0.24
CTCFL-210ENST00000481655 SLC6A19Q695T7 634 aa13.53□□□□□ -0.24
CTCFL-210ENST00000481655 SHQ1Q6PI26 577 aaKnown RBP13.53□□□□□ -0.24
CTCFL-210ENST00000481655 TTC33Q6PID6 262 aaPredicted RBP13.53□□□□□ -0.24
CTCFL-210ENST00000481655 POMZP3Q6PJE2 187 aa13.53□□□□□ -0.24
CTCFL-210ENST00000481655 C5orf46Q6UWT4 87 aa13.53□□□□□ -0.24
CTCFL-210ENST00000481655 ZNF730Q6ZMV8 503 aa13.53□□□□□ -0.24
CTCFL-210ENST00000481655 ATG4DQ86TL0 474 aaPredicted RBP13.53□□□□□ -0.24
CTCFL-210ENST00000481655 TSPYL5Q86VY4 417 aaPredicted RBP13.53□□□□□ -0.24
CTCFL-210ENST00000481655 RNF113BQ8IZP6 322 aaKnown RBP13.53□□□□□ -0.24
CTCFL-210ENST00000481655 TMEM251Q8N6I4 163 aa13.53□□□□□ -0.24
CTCFL-210ENST00000481655 TEX19Q8NA77 164 aa13.53□□□□□ -0.24
CTCFL-210ENST00000481655 OR5K1Q8NHB7 308 aa13.53□□□□□ -0.24
CTCFL-210ENST00000481655 ACOT11Q8WXI4 607 aaPredicted RBP13.53□□□□□ -0.24
CTCFL-210ENST00000481655 CNTNAP3BQ96NU0 1288 aa13.53□□□□□ -0.24
CTCFL-210ENST00000481655 CNTNAP3Q9BZ76 1288 aa13.53□□□□□ -0.24
CTCFL-210ENST00000481655 SLC19A3Q9BZV2 496 aa13.53□□□□□ -0.24
CTCFL-210ENST00000481655 OR2B2Q9GZK3 357 aa13.53□□□□□ -0.24
CTCFL-210ENST00000481655 RASSF4Q9H2L5 321 aa13.53□□□□□ -0.24
CTCFL-210ENST00000481655 OSGIN1Q9UJX0 560 aa13.53□□□□□ -0.24
CTCFL-210ENST00000481655 HRH3Q9Y5N1 445 aa13.53□□□□□ -0.24
CTCFL-210ENST00000481655 TMED7-TICAM2A0A0A6YYA0 188 aa13.52□□□□□ -0.25
CTCFL-210ENST00000481655 HTR3EA5X5Y0 456 aa13.52□□□□□ -0.25
CTCFL-210ENST00000481655 B4DXG7 233 aa13.52□□□□□ -0.25
CTCFL-210ENST00000481655 G3V2T6 193 aa13.52□□□□□ -0.25
CTCFL-210ENST00000481655 CCNB2O95067 398 aa13.52□□□□□ -0.25
CTCFL-210ENST00000481655 CRYABP02511 175 aaKnown RBP13.52□□□□□ -0.25
CTCFL-210ENST00000481655 RFPL3SP0C7P2 107 aa13.52□□□□□ -0.25
CTCFL-210ENST00000481655 MAGEA5P43359 124 aa13.52□□□□□ -0.25
CTCFL-210ENST00000481655 SELENBP1Q13228 472 aa13.52□□□□□ -0.25
CTCFL-210ENST00000481655 SLC10A1Q14973 349 aa13.52□□□□□ -0.25
CTCFL-210ENST00000481655 ST3GAL2Q16842 350 aa13.52□□□□□ -0.25
CTCFL-210ENST00000481655 MICAQ29983 383 aa13.52□□□□□ -0.25
CTCFL-210ENST00000481655 HMBOX1Q6NT76 420 aa13.52□□□□□ -0.25
CTCFL-210ENST00000481655 C3orf33Q6P1S2 294 aa13.52□□□□□ -0.25
CTCFL-210ENST00000481655 FAM83FQ8NEG4 500 aaPredicted RBP13.52□□□□□ -0.25
CTCFL-210ENST00000481655 SLC7A13Q8TCU3 470 aa13.52□□□□□ -0.25
CTCFL-210ENST00000481655 SLC25A43Q8WUT9 341 aaPredicted RBP13.52□□□□□ -0.25
CTCFL-210ENST00000481655 TMEM239Q8WW34 195 aa13.52□□□□□ -0.25
CTCFL-210ENST00000481655 EME1Q96AY2 570 aa13.52□□□□□ -0.25
CTCFL-210ENST00000481655 SFXN2Q96NB2 322 aa13.52□□□□□ -0.25
CTCFL-210ENST00000481655 KLHDC3Q9BQ90 382 aa13.52□□□□□ -0.25
CTCFL-210ENST00000481655 C9orf16Q9BUW7 83 aa13.52□□□□□ -0.25
CTCFL-210ENST00000481655 OSBPL10Q9BXB5 764 aa13.52□□□□□ -0.25
CTCFL-210ENST00000481655 KLHL4Q9C0H6 718 aa13.52□□□□□ -0.25
CTCFL-210ENST00000481655 MAN2C1Q9NTJ4 1040 aa13.52□□□□□ -0.25
CTCFL-210ENST00000481655 CHRNA9Q9UGM1 479 aa13.52□□□□□ -0.25
CTCFL-210ENST00000481655 RPH3AQ9Y2J0 694 aaPredicted RBP13.52□□□□□ -0.25
CTCFL-210ENST00000481655 TMED7Q9Y3B3 224 aa13.52□□□□□ -0.25
CTCFL-210ENST00000481655 MED31Q9Y3C7 131 aa13.52□□□□□ -0.25
CTCFL-210ENST00000481655 LOC400499M0QZD8 3231 aa13.52□□□□□ -0.25
CTCFL-210ENST00000481655 TPRP12270 2363 aaKnown RBP13.51□□□□□ -0.25
CTCFL-210ENST00000481655 TRBV4-1A0A0J9YWV2 114 aa13.51□□□□□ -0.25
CTCFL-210ENST00000481655 SH3PXD2BA1X283 911 aa13.51□□□□□ -0.25
CTCFL-210ENST00000481655 ARRDC5A6NEK1 342 aa13.51□□□□□ -0.25
CTCFL-210ENST00000481655 GJE1A6NN92 205 aa13.51□□□□□ -0.25
CTCFL-210ENST00000481655 ZNF208O43345 1280 aa13.51□□□□□ -0.25
CTCFL-210ENST00000481655 SUSD5O60279 629 aa13.51□□□□□ -0.25
CTCFL-210ENST00000481655 OR10H3O60404 316 aa13.51□□□□□ -0.25
CTCFL-210ENST00000481655 ZIC3O60481 467 aa13.51□□□□□ -0.25
CTCFL-210ENST00000481655 NTN1O95631 604 aa13.51□□□□□ -0.25
CTCFL-210ENST00000481655 THY1P04216 161 aa13.51□□□□□ -0.25
CTCFL-210ENST00000481655 TCEA1P23193 301 aaKnown RBP13.51□□□□□ -0.25
CTCFL-210ENST00000481655 LIMS1P48059 325 aa13.51□□□□□ -0.25
CTCFL-210ENST00000481655 TRIP10Q15642 601 aa13.51□□□□□ -0.25
CTCFL-210ENST00000481655 PLEKHN1Q494U1 663 aaPredicted RBP13.51□□□□□ -0.25
CTCFL-210ENST00000481655 PODNL1Q6PEZ8 512 aa13.51□□□□□ -0.25
CTCFL-210ENST00000481655 YRDCQ86U90 279 aaKnown RBP13.51□□□□□ -0.25
CTCFL-210ENST00000481655 NKAIN4Q8IVV8 208 aa13.51□□□□□ -0.25
CTCFL-210ENST00000481655 CDK20Q8IZL9 346 aa13.51□□□□□ -0.25
CTCFL-210ENST00000481655 OR4C15Q8NGM1 316 aa13.51□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms