RNA–Protein interactions for RNA: ENST00000479897.5

TRAPPC12-218, Transcript of trafficking protein particle complex 12, humanhuman

TSL 3

Gene TRAPPC12, Length 454 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC12-218ENST00000479897 SPENQ96T58 3664 aaKnown RBP11.35□□□□□ -0.59
TRAPPC12-218ENST00000479897 DNAJC13O75165 2243 aa11.35□□□□□ -0.59
TRAPPC12-218ENST00000479897 A0A087WUJ7 227 aa11.35□□□□□ -0.59
TRAPPC12-218ENST00000479897 FAM166BA8MTA8 275 aa11.35□□□□□ -0.59
TRAPPC12-218ENST00000479897 H0YHG0 523 aa11.35□□□□□ -0.59
TRAPPC12-218ENST00000479897 TFECO14948 347 aaPredicted RBP11.35□□□□□ -0.59
TRAPPC12-218ENST00000479897 GMFGO60234 142 aa11.35□□□□□ -0.59
TRAPPC12-218ENST00000479897 HCN1O60741 890 aa11.35□□□□□ -0.59
TRAPPC12-218ENST00000479897 KRT36O76013 467 aa11.35□□□□□ -0.59
TRAPPC12-218ENST00000479897 CST1P01037 141 aa11.35□□□□□ -0.59
TRAPPC12-218ENST00000479897 IGF2P01344 180 aa11.35□□□□□ -0.59
TRAPPC12-218ENST00000479897 MT-ND1P03886 318 aa11.35□□□□□ -0.59
TRAPPC12-218ENST00000479897 H1F0P07305 194 aaKnown RBP11.35□□□□□ -0.59
TRAPPC12-218ENST00000479897 CHMP24386 653 aa11.35□□□□□ -0.59
TRAPPC12-218ENST00000479897 FASP25445 335 aa11.35□□□□□ -0.59
TRAPPC12-218ENST00000479897 FKBP2P26885 142 aaKnown RBP11.35□□□□□ -0.59
TRAPPC12-218ENST00000479897 TACR3P29371 465 aa11.35□□□□□ -0.59
TRAPPC12-218ENST00000479897 RFC3P40938 356 aa11.35□□□□□ -0.59
TRAPPC12-218ENST00000479897 RBM34P42696 430 aaKnown RBP11.35□□□□□ -0.59
TRAPPC12-218ENST00000479897 LIMS1P48059 325 aa11.35□□□□□ -0.59
TRAPPC12-218ENST00000479897 HMGA2P52926 109 aa11.35□□□□□ -0.59
TRAPPC12-218ENST00000479897 CDH12P55289 794 aa11.35□□□□□ -0.59
TRAPPC12-218ENST00000479897 GFRA1P56159 465 aa11.35□□□□□ -0.59
TRAPPC12-218ENST00000479897 SMIM11AP58511 58 aa11.35□□□□□ -0.59
TRAPPC12-218ENST00000479897 SELENBP1Q13228 472 aa11.35□□□□□ -0.59
TRAPPC12-218ENST00000479897 ATP6AP1Q15904 470 aa11.35□□□□□ -0.59
TRAPPC12-218ENST00000479897 CMPK2Q5EBM0 449 aa11.35□□□□□ -0.59
TRAPPC12-218ENST00000479897 NHSL2Q5HYW2 709 aa11.35□□□□□ -0.59
TRAPPC12-218ENST00000479897 ZNF324BQ6AW86 544 aaPredicted RBP11.35□□□□□ -0.59
TRAPPC12-218ENST00000479897 C3orf33Q6P1S2 294 aa11.35□□□□□ -0.59
TRAPPC12-218ENST00000479897 FAM180AQ6UWF9 173 aa11.35□□□□□ -0.59
TRAPPC12-218ENST00000479897 C5orf46Q6UWT4 87 aa11.35□□□□□ -0.59
TRAPPC12-218ENST00000479897 GDF7Q7Z4P5 450 aa11.35□□□□□ -0.59
TRAPPC12-218ENST00000479897 TEX19Q8NA77 164 aa11.35□□□□□ -0.59
TRAPPC12-218ENST00000479897 SLC25A43Q8WUT9 341 aaPredicted RBP11.35□□□□□ -0.59
TRAPPC12-218ENST00000479897 PRSS27Q9BQR3 290 aa11.35□□□□□ -0.59
TRAPPC12-218ENST00000479897 FUZQ9BT04 418 aa11.35□□□□□ -0.59
TRAPPC12-218ENST00000479897 FNDC11Q9BVV2 318 aa11.35□□□□□ -0.59
TRAPPC12-218ENST00000479897 PRR14Q9BWN1 585 aa11.35□□□□□ -0.59
TRAPPC12-218ENST00000479897 NMNAT1Q9HAN9 279 aaPredicted RBP11.35□□□□□ -0.59
TRAPPC12-218ENST00000479897 RIMS3Q9UJD0 308 aa11.35□□□□□ -0.59
TRAPPC12-218ENST00000479897 LYVE1Q9Y5Y7 322 aa11.35□□□□□ -0.59
TRAPPC12-218ENST00000479897 BOD1L1Q8NFC6 3051 aa11.34□□□□□ -0.59
TRAPPC12-218ENST00000479897 A0A1B0GVC2 190 aa11.34□□□□□ -0.59
TRAPPC12-218ENST00000479897 OR2M5A3KFT3 312 aa11.34□□□□□ -0.59
TRAPPC12-218ENST00000479897 ATXN7O15265 892 aaPredicted RBP11.34□□□□□ -0.59
TRAPPC12-218ENST00000479897 CLOCKO15516 846 aa11.34□□□□□ -0.59
TRAPPC12-218ENST00000479897 ZNF208O43345 1280 aa11.34□□□□□ -0.59
TRAPPC12-218ENST00000479897 SUSD5O60279 629 aa11.34□□□□□ -0.59
TRAPPC12-218ENST00000479897 FZD7O75084 574 aa11.34□□□□□ -0.59
TRAPPC12-218ENST00000479897 TIPRLO75663 272 aa11.34□□□□□ -0.59
TRAPPC12-218ENST00000479897 DIRAS1O95057 198 aa11.34□□□□□ -0.59
TRAPPC12-218ENST00000479897 CELA3AP09093 270 aa11.34□□□□□ -0.59
TRAPPC12-218ENST00000479897 RRM2P31350 389 aa11.34□□□□□ -0.59
TRAPPC12-218ENST00000479897 YAP1P46937 504 aaKnown RBP11.34□□□□□ -0.59
TRAPPC12-218ENST00000479897 SPIBQ01892 262 aa11.34□□□□□ -0.59
TRAPPC12-218ENST00000479897 ALDH6A1Q02252 535 aaKnown RBP11.34□□□□□ -0.59
TRAPPC12-218ENST00000479897 MERTKQ12866 999 aa11.34□□□□□ -0.59
TRAPPC12-218ENST00000479897 RIPK1Q13546 671 aa11.34□□□□□ -0.59
TRAPPC12-218ENST00000479897 LY6DQ14210 128 aa11.34□□□□□ -0.59
TRAPPC12-218ENST00000479897 SLC10A1Q14973 349 aa11.34□□□□□ -0.59
TRAPPC12-218ENST00000479897 TRAM2Q15035 370 aa11.34□□□□□ -0.59
TRAPPC12-218ENST00000479897 COLEC12Q5KU26 742 aa11.34□□□□□ -0.59
TRAPPC12-218ENST00000479897 RAET1LQ5VY80 246 aa11.34□□□□□ -0.59
TRAPPC12-218ENST00000479897 ADGRG3Q86Y34 549 aa11.34□□□□□ -0.59
TRAPPC12-218ENST00000479897 OR14L1PQ8NHC6 308 aa11.34□□□□□ -0.59
TRAPPC12-218ENST00000479897 SLC39A7Q92504 469 aa11.34□□□□□ -0.59
TRAPPC12-218ENST00000479897 HS6ST2Q96MM7 605 aa11.34□□□□□ -0.59
TRAPPC12-218ENST00000479897 EPYCQ99645 322 aa11.34□□□□□ -0.59
TRAPPC12-218ENST00000479897 BARD1Q99728 777 aaKnown RBP11.34□□□□□ -0.59
TRAPPC12-218ENST00000479897 NPAS1Q99742 590 aa11.34□□□□□ -0.59
TRAPPC12-218ENST00000479897 TMEM43Q9BTV4 400 aa11.34□□□□□ -0.59
TRAPPC12-218ENST00000479897 SLC19A3Q9BZV2 496 aa11.34□□□□□ -0.59
TRAPPC12-218ENST00000479897 CTPS2Q9NRF8 586 aa11.34□□□□□ -0.59
TRAPPC12-218ENST00000479897 SELENONQ9NZV5 590 aa11.34□□□□□ -0.59
TRAPPC12-218ENST00000479897 CHRNA9Q9UGM1 479 aa11.34□□□□□ -0.59
TRAPPC12-218ENST00000479897 SLC7A7Q9UM01 511 aa11.34□□□□□ -0.59
TRAPPC12-218ENST00000479897 TESMINQ9Y4I5 508 aa11.34□□□□□ -0.59
TRAPPC12-218ENST00000479897 SPIN1Q9Y657 262 aaPredicted RBP11.34□□□□□ -0.59
TRAPPC12-218ENST00000479897 KMT2BQ9UMN6 2715 aaPredicted RBP11.34□□□□□ -0.59
TRAPPC12-218ENST00000479897 KIAA1549Q9HCM3 1950 aa11.34□□□□□ -0.59
TRAPPC12-218ENST00000479897 COL6A6A6NMZ7 2263 aa11.33□□□□□ -0.6
TRAPPC12-218ENST00000479897 MED12Q93074 2177 aa11.33□□□□□ -0.6
TRAPPC12-218ENST00000479897 TMED7-TICAM2A0A0A6YYA0 188 aa11.33□□□□□ -0.6
TRAPPC12-218ENST00000479897 HTR3EA5X5Y0 456 aa11.33□□□□□ -0.6
TRAPPC12-218ENST00000479897 ELOA3DA6NLF2 546 aaPredicted RBP11.33□□□□□ -0.6
TRAPPC12-218ENST00000479897 MGRN1O60291 552 aa11.33□□□□□ -0.6
TRAPPC12-218ENST00000479897 NPIPB7O75200 414 aa11.33□□□□□ -0.6
TRAPPC12-218ENST00000479897 TRAPPC6AO75865 159 aa11.33□□□□□ -0.6
TRAPPC12-218ENST00000479897 GADD45GO95257 159 aa11.33□□□□□ -0.6
TRAPPC12-218ENST00000479897 LDLRP01130 860 aa11.33□□□□□ -0.6
TRAPPC12-218ENST00000479897 CLK1P49759 484 aaKnown RBP11.33□□□□□ -0.6
TRAPPC12-218ENST00000479897 ZNF800Q2TB10 664 aaPredicted RBP eCLIP11.33□□□□□ -0.6
TRAPPC12-218ENST00000479897 ELOA3BQ3SY89 546 aa11.33□□□□□ -0.6
TRAPPC12-218ENST00000479897 WIPI1Q5MNZ9 446 aaPredicted RBP11.33□□□□□ -0.6
TRAPPC12-218ENST00000479897 WDR88Q6ZMY6 472 aa11.33□□□□□ -0.6
TRAPPC12-218ENST00000479897 TRILQ7L0X0 811 aa11.33□□□□□ -0.6
TRAPPC12-218ENST00000479897 YRDCQ86U90 279 aaKnown RBP11.33□□□□□ -0.6
TRAPPC12-218ENST00000479897 LILRA2Q8N149 483 aa11.33□□□□□ -0.6
TRAPPC12-218ENST00000479897 ELOA3Q8NG57 546 aa11.33□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 58 ms