RNA–Protein interactions for RNA: ENST00000479596.5

CCNL1-222, Transcript of cyclin L1, human

TSL 3

Gene CCNL1, Length 883 nt, Biotype retained intron, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CCNL1-222	ENST00000479596	HPCA	P84074	193 aa		13.36	□□□□□ -0.27
CCNL1-222	ENST00000479596	FOXD4	Q12950	439 aa	Predicted RBP	13.36	□□□□□ -0.27
CCNL1-222	ENST00000479596	GSTA3	Q16772	222 aa		13.36	□□□□□ -0.27
CCNL1-222	ENST00000479596	GTDC1	Q4AE62	458 aa		13.36	□□□□□ -0.27
CCNL1-222	ENST00000479596	SYT14P1	Q58G82	188 aa		13.36	□□□□□ -0.27
CCNL1-222	ENST00000479596	TMEM201	Q5SNT2	666 aa		13.36	□□□□□ -0.27
CCNL1-222	ENST00000479596	EPGN	Q6UW88	154 aa		13.36	□□□□□ -0.27
CCNL1-222	ENST00000479596	LRRC74B	Q6ZQY2	392 aa		13.36	□□□□□ -0.27
CCNL1-222	ENST00000479596	TMEM234	Q8WY98	164 aa		13.36	□□□□□ -0.27
CCNL1-222	ENST00000479596	OR5B2	Q96R09	309 aa		13.36	□□□□□ -0.27
CCNL1-222	ENST00000479596	ACTR6	Q9GZN1	396 aa		13.36	□□□□□ -0.27
CCNL1-222	ENST00000479596	DLL4	Q9NR61	685 aa		13.36	□□□□□ -0.27
CCNL1-222	ENST00000479596	CTPS2	Q9NRF8	586 aa		13.36	□□□□□ -0.27
CCNL1-222	ENST00000479596	ST6GALNAC1	Q9NSC7	600 aa	Predicted RBP	13.36	□□□□□ -0.27
CCNL1-222	ENST00000479596	LIPT1	Q9Y234	373 aa		13.36	□□□□□ -0.27
CCNL1-222	ENST00000479596	USH1C	Q9Y6N9	552 aa		13.36	□□□□□ -0.27
CCNL1-222	ENST00000479596	RAI1	Q7Z5J4	1906 aa	Predicted RBP	13.36	□□□□□ -0.27
CCNL1-222	ENST00000479596	ZNF814	B7Z6K7	855 aa		13.35	□□□□□ -0.27
CCNL1-222	ENST00000479596	UBD	O15205	165 aa		13.35	□□□□□ -0.27
CCNL1-222	ENST00000479596	CYTIP	O60759	359 aa		13.35	□□□□□ -0.27
CCNL1-222	ENST00000479596	DIAPH2	O60879	1101 aa		13.35	□□□□□ -0.27
CCNL1-222	ENST00000479596	YES1	P07947	543 aa		13.35	□□□□□ -0.27
CCNL1-222	ENST00000479596	CD99	P14209	185 aa		13.35	□□□□□ -0.27
CCNL1-222	ENST00000479596	PPP3CB	P16298	524 aa		13.35	□□□□□ -0.27
CCNL1-222	ENST00000479596	RYK	P34925	604 aa		13.35	□□□□□ -0.27
CCNL1-222	ENST00000479596	DIO1	P49895	249 aa		13.35	□□□□□ -0.27
CCNL1-222	ENST00000479596	TTMP	Q5BVD1	217 aa		13.35	□□□□□ -0.27
CCNL1-222	ENST00000479596	ABLIM2	Q6H8Q1	611 aa		13.35	□□□□□ -0.27
CCNL1-222	ENST00000479596	TMPPE	Q6ZT21	453 aa		13.35	□□□□□ -0.27
CCNL1-222	ENST00000479596	STK32C	Q86UX6	486 aa		13.35	□□□□□ -0.27
CCNL1-222	ENST00000479596	SLC43A2	Q8N370	569 aa		13.35	□□□□□ -0.27
CCNL1-222	ENST00000479596	WFDC11	Q8NEX6	87 aa		13.35	□□□□□ -0.27
CCNL1-222	ENST00000479596	SLC25A43	Q8WUT9	341 aa	Predicted RBP	13.35	□□□□□ -0.27
CCNL1-222	ENST00000479596	VPS33A	Q96AX1	596 aa		13.35	□□□□□ -0.27
CCNL1-222	ENST00000479596	C7orf26	Q96N11	449 aa		13.35	□□□□□ -0.27
CCNL1-222	ENST00000479596	ZNF300	Q96RE9	604 aa	Predicted RBP	13.35	□□□□□ -0.27
CCNL1-222	ENST00000479596	OR10A4	Q9H209	315 aa		13.35	□□□□□ -0.27
CCNL1-222	ENST00000479596	SLCO1B3	Q9NPD5	702 aa		13.35	□□□□□ -0.27
CCNL1-222	ENST00000479596	BEX4	Q9NWD9	120 aa	Predicted RBP	13.35	□□□□□ -0.27
CCNL1-222	ENST00000479596	GPR52	Q9Y2T5	361 aa		13.35	□□□□□ -0.27
CCNL1-222	ENST00000479596	DSPP	Q9NZW4	1301 aa		13.35	□□□□□ -0.27
CCNL1-222	ENST00000479596	MBD3L2B	A0A1B0GVZ6	204 aa	Predicted RBP	13.34	□□□□□ -0.27
CCNL1-222	ENST00000479596	KRT75	O95678	551 aa		13.34	□□□□□ -0.27
CCNL1-222	ENST00000479596	FES	P07332	822 aa		13.34	□□□□□ -0.27
CCNL1-222	ENST00000479596	ZCCHC18	P0CG32	403 aa		13.34	□□□□□ -0.27
CCNL1-222	ENST00000479596	ETFA	P13804	333 aa		13.34	□□□□□ -0.27
CCNL1-222	ENST00000479596	HOXB9	P17482	250 aa	Predicted RBP	13.34	□□□□□ -0.27
CCNL1-222	ENST00000479596	HOXC12	P31275	282 aa		13.34	□□□□□ -0.27
CCNL1-222	ENST00000479596	APOBEC1	P41238	236 aa	Known RBP	13.34	□□□□□ -0.27
CCNL1-222	ENST00000479596	MRPL19	P49406	292 aa	Known RBP	13.34	□□□□□ -0.27
CCNL1-222	ENST00000479596	POLR2J	P52435	117 aa	Known RBP	13.34	□□□□□ -0.27
CCNL1-222	ENST00000479596	RIPPLY3	P57055	190 aa		13.34	□□□□□ -0.27
CCNL1-222	ENST00000479596	TSC22D1	Q15714	1073 aa		13.34	□□□□□ -0.27
CCNL1-222	ENST00000479596	MSANTD1	Q6ZTZ1	278 aa		13.34	□□□□□ -0.27
CCNL1-222	ENST00000479596	GRINA	Q7Z429	371 aa		13.34	□□□□□ -0.27
CCNL1-222	ENST00000479596	ADGRG3	Q86Y34	549 aa		13.34	□□□□□ -0.27
CCNL1-222	ENST00000479596	CMIP	Q8IY22	773 aa		13.34	□□□□□ -0.27
CCNL1-222	ENST00000479596	ARFGAP2	Q8N6H7	521 aa		13.34	□□□□□ -0.27
CCNL1-222	ENST00000479596	ZNF563	Q8TA94	476 aa		13.34	□□□□□ -0.27
CCNL1-222	ENST00000479596	WDR60	Q8WVS4	1066 aa		13.34	□□□□□ -0.27
CCNL1-222	ENST00000479596	S100PBP	Q96BU1	408 aa		13.34	□□□□□ -0.27
CCNL1-222	ENST00000479596	AURKB	Q96GD4	344 aa	Predicted RBP	13.34	□□□□□ -0.27
CCNL1-222	ENST00000479596	ARL5B	Q96KC2	179 aa		13.34	□□□□□ -0.27
CCNL1-222	ENST00000479596	ATP6V1G3	Q96LB4	118 aa		13.34	□□□□□ -0.27
CCNL1-222	ENST00000479596	OR11A1	Q9GZK7	315 aa		13.34	□□□□□ -0.27
CCNL1-222	ENST00000479596	MTHFD2L	Q9H903	347 aa	Predicted RBP	13.34	□□□□□ -0.27
CCNL1-222	ENST00000479596	UBTD1	Q9HAC8	227 aa		13.34	□□□□□ -0.27
CCNL1-222	ENST00000479596	SERINC1	Q9NRX5	453 aa		13.34	□□□□□ -0.27
CCNL1-222	ENST00000479596	KLHL9	Q9P2J3	617 aa		13.34	□□□□□ -0.27
CCNL1-222	ENST00000479596	CHRNA9	Q9UGM1	479 aa		13.34	□□□□□ -0.27
CCNL1-222	ENST00000479596	PRR14L	Q5THK1	2151 aa		13.34	□□□□□ -0.27
CCNL1-222	ENST00000479596	FREM1	Q5H8C1	2179 aa		13.33	□□□□□ -0.28
CCNL1-222	ENST00000479596	SULT2B1	O00204	365 aa		13.33	□□□□□ -0.28
CCNL1-222	ENST00000479596	NR2F1	P10589	423 aa		13.33	□□□□□ -0.28
CCNL1-222	ENST00000479596	MAGEA8	P43361	318 aa		13.33	□□□□□ -0.28
CCNL1-222	ENST00000479596	OR3A2	P47893	321 aa		13.33	□□□□□ -0.28
CCNL1-222	ENST00000479596	IDH2	P48735	452 aa	Known RBP	13.33	□□□□□ -0.28
CCNL1-222	ENST00000479596	ANXA11	P50995	505 aa	Known RBP	13.33	□□□□□ -0.28
CCNL1-222	ENST00000479596	RASGEF1B	Q0VAM2	473 aa		13.33	□□□□□ -0.28
CCNL1-222	ENST00000479596	ACKR1	Q16570	336 aa		13.33	□□□□□ -0.28
CCNL1-222	ENST00000479596	BEX5	Q5H9J7	111 aa		13.33	□□□□□ -0.28
CCNL1-222	ENST00000479596	SFRP5	Q5T4F7	317 aa		13.33	□□□□□ -0.28
CCNL1-222	ENST00000479596	MRPL2	Q5T653	305 aa	Known RBP	13.33	□□□□□ -0.28
CCNL1-222	ENST00000479596	SEZ6L2	Q6UXD5	910 aa		13.33	□□□□□ -0.28
CCNL1-222	ENST00000479596	ZC3HAV1	Q7Z2W4	902 aa	Known RBP	13.33	□□□□□ -0.28
CCNL1-222	ENST00000479596	MIER2	Q8N344	545 aa		13.33	□□□□□ -0.28
CCNL1-222	ENST00000479596	IGFBPL1	Q8WX77	278 aa		13.33	□□□□□ -0.28
CCNL1-222	ENST00000479596	GTF2H4	Q92759	462 aa		13.33	□□□□□ -0.28
CCNL1-222	ENST00000479596	ZNF775	Q96BV0	537 aa	Predicted RBP	13.33	□□□□□ -0.28
CCNL1-222	ENST00000479596	DNAJA3	Q96EY1	480 aa		13.33	□□□□□ -0.28
CCNL1-222	ENST00000479596	EBF4	Q9BQW3	602 aa		13.33	□□□□□ -0.28
CCNL1-222	ENST00000479596	TACO1	Q9BSH4	297 aa	Known RBP	13.33	□□□□□ -0.28
CCNL1-222	ENST00000479596	TMEM204	Q9BSN7	226 aa		13.33	□□□□□ -0.28
CCNL1-222	ENST00000479596	PAIP1	Q9H074	479 aa	Known RBP	13.33	□□□□□ -0.28
CCNL1-222	ENST00000479596	TPT1P8	Q9HAU6	139 aa		13.33	□□□□□ -0.28
CCNL1-222	ENST00000479596	FANCF	Q9NPI8	374 aa		13.33	□□□□□ -0.28
CCNL1-222	ENST00000479596	PRSS50	Q9UI38	385 aa		13.33	□□□□□ -0.28
CCNL1-222	ENST00000479596	NIPBL	Q6KC79	2804 aa	eCLIP	13.33	□□□□□ -0.28
CCNL1-222	ENST00000479596	IGKV3D-15	A0A087WSY6	115 aa		13.32	□□□□□ -0.28
CCNL1-222	ENST00000479596	FAM234B	A2RU67	622 aa		13.32	□□□□□ -0.28

Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms