RNA–Protein interactions for RNA: ENST00000478443.1

USP22-205, Transcript of ubiquitin specific peptidase 22, humanhuman

TSL 1 (best)

Gene USP22, Length 1,071 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP22-205ENST00000478443 EPS8Q12929 822 aa13.32□□□□□ -0.28
USP22-205ENST00000478443 PON3Q15166 354 aa13.32□□□□□ -0.28
USP22-205ENST00000478443 TOMM34Q15785 309 aaPredicted RBP13.32□□□□□ -0.28
USP22-205ENST00000478443 ADRM1Q16186 407 aa13.32□□□□□ -0.28
USP22-205ENST00000478443 VMACQ2NL98 169 aa13.32□□□□□ -0.28
USP22-205ENST00000478443 POMZP3Q6PJE2 187 aa13.32□□□□□ -0.28
USP22-205ENST00000478443 DHRS4L2Q6PKH6 230 aa13.32□□□□□ -0.28
USP22-205ENST00000478443 HACD2Q6Y1H2 254 aa13.32□□□□□ -0.28
USP22-205ENST00000478443 PLEKHM3Q6ZWE6 761 aa13.32□□□□□ -0.28
USP22-205ENST00000478443 NET1Q7Z628 596 aaPredicted RBP13.32□□□□□ -0.28
USP22-205ENST00000478443 ADGRE4PQ86SQ3 457 aa13.32□□□□□ -0.28
USP22-205ENST00000478443 CCDC197Q8NCU1 140 aa13.32□□□□□ -0.28
USP22-205ENST00000478443 TNIP2Q8NFZ5 429 aa13.32□□□□□ -0.28
USP22-205ENST00000478443 OR10D3Q8NH80 312 aa13.32□□□□□ -0.28
USP22-205ENST00000478443 POC1BQ8TC44 478 aa13.32□□□□□ -0.28
USP22-205ENST00000478443 OSTF1Q92882 214 aa13.32□□□□□ -0.28
USP22-205ENST00000478443 DDIT4LQ96D03 193 aa13.32□□□□□ -0.28
USP22-205ENST00000478443 SLC39A3Q9BRY0 314 aa13.32□□□□□ -0.28
USP22-205ENST00000478443 SFXN3Q9BWM7 321 aa13.32□□□□□ -0.28
USP22-205ENST00000478443 MYLK2Q9H1R3 596 aa13.32□□□□□ -0.28
USP22-205ENST00000478443 SLC24A3Q9HC58 644 aa13.32□□□□□ -0.28
USP22-205ENST00000478443 GLRX2Q9NS18 164 aa13.32□□□□□ -0.28
USP22-205ENST00000478443 RLIMQ9NVW2 624 aa13.32□□□□□ -0.28
USP22-205ENST00000478443 NDE1Q9NXR1 346 aa13.32□□□□□ -0.28
USP22-205ENST00000478443 CLCF1Q9UBD9 225 aa13.32□□□□□ -0.28
USP22-205ENST00000478443 CHRNA9Q9UGM1 479 aa13.32□□□□□ -0.28
USP22-205ENST00000478443 ASH1LQ9NR48 2969 aaKnown RBP13.32□□□□□ -0.28
USP22-205ENST00000478443 GMNNO75496 209 aa13.31□□□□□ -0.28
USP22-205ENST00000478443 RNF224P0DH78 156 aa13.31□□□□□ -0.28
USP22-205ENST00000478443 BMP5P22003 454 aa13.31□□□□□ -0.28
USP22-205ENST00000478443 CXCR1P25024 350 aa13.31□□□□□ -0.28
USP22-205ENST00000478443 PEX19P40855 299 aa13.31□□□□□ -0.28
USP22-205ENST00000478443 SUCLG1P53597 346 aaKnown RBP13.31□□□□□ -0.28
USP22-205ENST00000478443 DLX5P56178 289 aa13.31□□□□□ -0.28
USP22-205ENST00000478443 VEZF1Q14119 521 aa13.31□□□□□ -0.28
USP22-205ENST00000478443 SELPLGQ14242 412 aa13.31□□□□□ -0.28
USP22-205ENST00000478443 NCCRP1Q6ZVX7 275 aaPredicted RBP13.31□□□□□ -0.28
USP22-205ENST00000478443 GGNQ86UU5 652 aa13.31□□□□□ -0.28
USP22-205ENST00000478443 RANBP3LQ86VV4 465 aaPredicted RBP13.31□□□□□ -0.28
USP22-205ENST00000478443 CADM2Q8N3J6 435 aa13.31□□□□□ -0.28
USP22-205ENST00000478443 OR2T12Q8NG77 320 aa13.31□□□□□ -0.28
USP22-205ENST00000478443 TRIM2Q9C040 744 aa13.31□□□□□ -0.28
USP22-205ENST00000478443 PIGMQ9H3S5 423 aa13.31□□□□□ -0.28
USP22-205ENST00000478443 HDGFL3Q9Y3E1 203 aa13.31□□□□□ -0.28
USP22-205ENST00000478443 CACNA1CQ13936 2221 aa13.3□□□□□ -0.28
USP22-205ENST00000478443 FAM90A27PA6NNH2 459 aa13.3□□□□□ -0.28
USP22-205ENST00000478443 M0QX08 132 aa13.3□□□□□ -0.28
USP22-205ENST00000478443 FXYD1O00168 92 aa13.3□□□□□ -0.28
USP22-205ENST00000478443 ZNF208O43345 1280 aa13.3□□□□□ -0.28
USP22-205ENST00000478443 OPN1LWP04000 364 aa13.3□□□□□ -0.28
USP22-205ENST00000478443 C8BP07358 591 aa13.3□□□□□ -0.28
USP22-205ENST00000478443 GKN3PP0CG01 181 aa13.3□□□□□ -0.28
USP22-205ENST00000478443 CTBP2P56545 445 aa13.3□□□□□ -0.28
USP22-205ENST00000478443 RGS8P57771 180 aaPredicted RBP13.3□□□□□ -0.28
USP22-205ENST00000478443 RAC3P60763 192 aa13.3□□□□□ -0.28
USP22-205ENST00000478443 RNPS1Q15287 305 aaKnown RBP13.3□□□□□ -0.28
USP22-205ENST00000478443 SYT14P1Q58G82 188 aa13.3□□□□□ -0.28
USP22-205ENST00000478443 RABL3Q5HYI8 236 aa13.3□□□□□ -0.28
USP22-205ENST00000478443 PTOV1Q86YD1 416 aa13.3□□□□□ -0.28
USP22-205ENST00000478443 ZZZ3Q8IYH5 903 aa13.3□□□□□ -0.28
USP22-205ENST00000478443 SLC43A2Q8N370 569 aa13.3□□□□□ -0.28
USP22-205ENST00000478443 CLIP4Q8N3C7 705 aa13.3□□□□□ -0.28
USP22-205ENST00000478443 C9orf106Q8NAJ2 232 aa13.3□□□□□ -0.28
USP22-205ENST00000478443 FNDC9Q8TBE3 224 aa13.3□□□□□ -0.28
USP22-205ENST00000478443 INTS12Q96CB8 462 aaKnown RBP13.3□□□□□ -0.28
USP22-205ENST00000478443 OR5B2Q96R09 309 aa13.3□□□□□ -0.28
USP22-205ENST00000478443 ZNF559Q9BR84 538 aa13.3□□□□□ -0.28
USP22-205ENST00000478443 TRIM8Q9BZR9 551 aa13.3□□□□□ -0.28
USP22-205ENST00000478443 PIF1Q9H611 641 aa13.3□□□□□ -0.28
USP22-205ENST00000478443 TMEM27Q9HBJ8 222 aa13.3□□□□□ -0.28
USP22-205ENST00000478443 FANCFQ9NPI8 374 aa13.3□□□□□ -0.28
USP22-205ENST00000478443 FAM53CQ9NYF3 392 aa13.3□□□□□ -0.28
USP22-205ENST00000478443 FOXD3Q9UJU5 478 aaPredicted RBP13.3□□□□□ -0.28
USP22-205ENST00000478443 SLC9A8Q9Y2E8 581 aa13.3□□□□□ -0.28
USP22-205ENST00000478443 EMC9Q9Y3B6 208 aa13.3□□□□□ -0.28
USP22-205ENST00000478443 TMED7-TICAM2A0A0A6YYA0 188 aa13.29□□□□□ -0.28
USP22-205ENST00000478443 A0A0J9YW62 118 aa13.29□□□□□ -0.28
USP22-205ENST00000478443 ELOVL7A1L3X0 281 aa13.29□□□□□ -0.28
USP22-205ENST00000478443 FAM220BPB1ANY3 271 aa13.29□□□□□ -0.28
USP22-205ENST00000478443 H0YC42 278 aa13.29□□□□□ -0.28
USP22-205ENST00000478443 SULT2B1O00204 365 aa13.29□□□□□ -0.28
USP22-205ENST00000478443 SYT5O00445 386 aa13.29□□□□□ -0.28
USP22-205ENST00000478443 GSTA4O15217 222 aa13.29□□□□□ -0.28
USP22-205ENST00000478443 CXCL13O43927 109 aa13.29□□□□□ -0.28
USP22-205ENST00000478443 SHOX2O60902 331 aaPredicted RBP13.29□□□□□ -0.28
USP22-205ENST00000478443 BCAS1O75363 584 aaPredicted RBP13.29□□□□□ -0.28
USP22-205ENST00000478443 MFN2O95140 757 aa13.29□□□□□ -0.28
USP22-205ENST00000478443 CLDN1O95832 211 aa13.29□□□□□ -0.28
USP22-205ENST00000478443 TACR3P29371 465 aa13.29□□□□□ -0.28
USP22-205ENST00000478443 TPD52P55327 224 aaPredicted RBP13.29□□□□□ -0.28
USP22-205ENST00000478443 PCBP3P57721 371 aaKnown RBP13.29□□□□□ -0.28
USP22-205ENST00000478443 MXRA7P84157 204 aa13.29□□□□□ -0.28
USP22-205ENST00000478443 SEM1Q6ZVN7 128 aa13.29□□□□□ -0.28
USP22-205ENST00000478443 TREML1Q86YW5 311 aa13.29□□□□□ -0.28
USP22-205ENST00000478443 C10orf111Q8N326 155 aa13.29□□□□□ -0.28
USP22-205ENST00000478443 CNEP1R1Q8N9A8 125 aa13.29□□□□□ -0.28
USP22-205ENST00000478443 OR52E4Q8NGH9 312 aa13.29□□□□□ -0.28
USP22-205ENST00000478443 DNAJA4Q8WW22 397 aaPredicted RBP13.29□□□□□ -0.28
USP22-205ENST00000478443 LZICQ8WZA0 190 aa13.29□□□□□ -0.28
USP22-205ENST00000478443 PROX1Q92786 737 aa13.29□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms