RNA–Protein interactions for RNA: ENST00000476724.1

TMEM53-208, Transcript of transmembrane protein 53, humanhuman

TSL 1 (best)

Gene TMEM53, Length 2,075 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53-208ENST00000476724 SHISA5Q8N114 240 aa15.16■□□□□ 0.02
TMEM53-208ENST00000476724 AVL9Q8NBF6 648 aa15.16■□□□□ 0.02
TMEM53-208ENST00000476724 OR6F1Q8NGZ6 308 aa15.16■□□□□ 0.02
TMEM53-208ENST00000476724 OR5W2Q8NH69 310 aa15.16■□□□□ 0.02
TMEM53-208ENST00000476724 RIT1Q92963 219 aa15.16■□□□□ 0.02
TMEM53-208ENST00000476724 TIMP4Q99727 224 aa15.16■□□□□ 0.02
TMEM53-208ENST00000476724 UCKL1Q9NWZ5 548 aa15.16■□□□□ 0.02
TMEM53-208ENST00000476724 DNAJB12Q9NXW2 375 aaKnown RBP15.16■□□□□ 0.02
TMEM53-208ENST00000476724 FLRT3Q9NZU0 649 aa15.16■□□□□ 0.02
TMEM53-208ENST00000476724 POU2F3Q9UKI9 436 aa15.16■□□□□ 0.02
TMEM53-208ENST00000476724 SMIM30A4D0T7 59 aa15.15■□□□□ 0.02
TMEM53-208ENST00000476724 TTC36A6NLP5 189 aa15.15■□□□□ 0.02
TMEM53-208ENST00000476724 PLPP2O43688 288 aa15.15■□□□□ 0.02
TMEM53-208ENST00000476724 SBK2P0C263 348 aa15.15■□□□□ 0.02
TMEM53-208ENST00000476724 SLC2A2P11168 524 aaPredicted RBP15.15■□□□□ 0.02
TMEM53-208ENST00000476724 SLC2A5P22732 501 aa15.15■□□□□ 0.02
TMEM53-208ENST00000476724 RPS7P62081 194 aaKnown RBP15.15■□□□□ 0.02
TMEM53-208ENST00000476724 ACTC1P68032 377 aa15.15■□□□□ 0.02
TMEM53-208ENST00000476724 ACTA1P68133 377 aa15.15■□□□□ 0.02
TMEM53-208ENST00000476724 IGLV3-21P80748 117 aaPredicted RBP15.15■□□□□ 0.02
TMEM53-208ENST00000476724 STX4Q12846 297 aa15.15■□□□□ 0.02
TMEM53-208ENST00000476724 DEFB133Q30KQ1 61 aa15.15■□□□□ 0.02
TMEM53-208ENST00000476724 CHCHD2P9Q5T1J5 151 aaPredicted RBP15.15■□□□□ 0.02
TMEM53-208ENST00000476724 ARHGAP11AQ6P4F7 1023 aa15.15■□□□□ 0.02
TMEM53-208ENST00000476724 ULK3Q6PHR2 472 aa15.15■□□□□ 0.02
TMEM53-208ENST00000476724 LINC00114Q6XXX2 140 aa15.15■□□□□ 0.02
TMEM53-208ENST00000476724 ARL14Q8N4G2 192 aa15.15■□□□□ 0.02
TMEM53-208ENST00000476724 TMEM99Q8N816 258 aa15.15■□□□□ 0.02
TMEM53-208ENST00000476724 ZNF614Q8N883 585 aa15.15■□□□□ 0.02
TMEM53-208ENST00000476724 C19orf18Q8NEA5 215 aa15.15■□□□□ 0.02
TMEM53-208ENST00000476724 OR10H4Q8NGA5 316 aa15.15■□□□□ 0.02
TMEM53-208ENST00000476724 GRHL3Q8TE85 626 aa15.15■□□□□ 0.02
TMEM53-208ENST00000476724 DNASE2BQ8WZ79 361 aa15.15■□□□□ 0.02
TMEM53-208ENST00000476724 KCTD12Q96CX2 325 aaKnown RBP15.15■□□□□ 0.02
TMEM53-208ENST00000476724 ZNF578Q96N58 590 aaPredicted RBP15.15■□□□□ 0.02
TMEM53-208ENST00000476724 G6PC3Q9BUM1 346 aa15.15■□□□□ 0.02
TMEM53-208ENST00000476724 HCAR1Q9BXC0 346 aa15.15■□□□□ 0.02
TMEM53-208ENST00000476724 C2orf92A0A1B0GVN3 265 aa15.15■□□□□ 0.02
TMEM53-208ENST00000476724 SHISA3A0PJX4 238 aa15.15■□□□□ 0.02
TMEM53-208ENST00000476724 MEIOCA2RUB1 952 aa15.15■□□□□ 0.02
TMEM53-208ENST00000476724 HMX3A6NHT5 357 aa15.15■□□□□ 0.02
TMEM53-208ENST00000476724 CLDN4O14493 209 aa15.15■□□□□ 0.02
TMEM53-208ENST00000476724 HPGDSO60760 199 aa15.15■□□□□ 0.02
TMEM53-208ENST00000476724 FNTBP49356 437 aa15.15■□□□□ 0.02
TMEM53-208ENST00000476724 ZXDAP98168 799 aa15.15■□□□□ 0.02
TMEM53-208ENST00000476724 FGFBP1Q14512 234 aa15.15■□□□□ 0.02
TMEM53-208ENST00000476724 ALG10BQ5I7T1 473 aa15.15■□□□□ 0.02
TMEM53-208ENST00000476724 TRIQKQ629K1 86 aa15.15■□□□□ 0.02
TMEM53-208ENST00000476724 B3GLCTQ6Y288 498 aa15.15■□□□□ 0.02
TMEM53-208ENST00000476724 TPRA1Q86W33 373 aa15.15■□□□□ 0.02
TMEM53-208ENST00000476724 GKN2Q86XP6 184 aa15.15■□□□□ 0.02
TMEM53-208ENST00000476724 GATAD2AQ86YP4 633 aa15.15■□□□□ 0.02
TMEM53-208ENST00000476724 OR51A7Q8NH64 312 aa15.15■□□□□ 0.02
TMEM53-208ENST00000476724 VSTM2LQ96N03 204 aa15.15■□□□□ 0.02
TMEM53-208ENST00000476724 PHOX2BQ99453 314 aa15.15■□□□□ 0.02
TMEM53-208ENST00000476724 C11orf54Q9H0W9 315 aaPredicted RBP15.15■□□□□ 0.02
TMEM53-208ENST00000476724 OR51V1Q9H2C8 321 aa15.15■□□□□ 0.02
TMEM53-208ENST00000476724 NEK6Q9HC98 313 aa15.15■□□□□ 0.02
TMEM53-208ENST00000476724 TRAV27A0A087WT01 109 aa15.14■□□□□ 0.01
TMEM53-208ENST00000476724 HTR3EA5X5Y0 456 aa15.14■□□□□ 0.01
TMEM53-208ENST00000476724 HCRTR1O43613 425 aa15.14■□□□□ 0.01
TMEM53-208ENST00000476724 RFPL3O75679 317 aa15.14■□□□□ 0.01
TMEM53-208ENST00000476724 APEX1P27695 318 aaKnown RBP15.14■□□□□ 0.01
TMEM53-208ENST00000476724 NOS3P29474 1203 aa15.14■□□□□ 0.01
TMEM53-208ENST00000476724 DDOSTP39656 456 aa15.14■□□□□ 0.01
TMEM53-208ENST00000476724 RFX3P48380 749 aa15.14■□□□□ 0.01
TMEM53-208ENST00000476724 SLC16A1P53985 500 aa15.14■□□□□ 0.01
TMEM53-208ENST00000476724 SRSF5Q13243 272 aaKnown RBP15.14■□□□□ 0.01
TMEM53-208ENST00000476724 MZT2BQ6NZ67 158 aa15.14■□□□□ 0.01
TMEM53-208ENST00000476724 Q8N402 240 aa15.14■□□□□ 0.01
TMEM53-208ENST00000476724 ZNF486Q96H40 463 aaPredicted RBP15.14■□□□□ 0.01
TMEM53-208ENST00000476724 TNFRSF13CQ96RJ3 184 aa15.14■□□□□ 0.01
TMEM53-208ENST00000476724 RNF32Q9H0A6 362 aa15.14■□□□□ 0.01
TMEM53-208ENST00000476724 DUSP15Q9H1R2 295 aaPredicted RBP15.14■□□□□ 0.01
TMEM53-208ENST00000476724 ADGRL4Q9HBW9 690 aa15.14■□□□□ 0.01
TMEM53-208ENST00000476724 CAPN10Q9HC96 672 aa15.14■□□□□ 0.01
TMEM53-208ENST00000476724 Q9N2J8 555 aa15.14■□□□□ 0.01
TMEM53-208ENST00000476724 RPS6KB2Q9UBS0 482 aa15.14■□□□□ 0.01
TMEM53-208ENST00000476724 SERTAD3Q9UJW9 196 aa15.14■□□□□ 0.01
TMEM53-208ENST00000476724 PCDH15Q96QU1 1955 aa15.14■□□□□ 0.01
TMEM53-208ENST00000476724 LINC00854A0A1B0GVQ3 168 aa15.13■□□□□ 0.01
TMEM53-208ENST00000476724 ZC3H12DA2A288 527 aaKnown RBP15.13■□□□□ 0.01
TMEM53-208ENST00000476724 NPIPB9F8W1W9 429 aa15.13■□□□□ 0.01
TMEM53-208ENST00000476724 PLA2G10O15496 165 aa15.13■□□□□ 0.01
TMEM53-208ENST00000476724 PRAMEF2O60811 474 aa15.13■□□□□ 0.01
TMEM53-208ENST00000476724 REM1O75628 298 aa15.13■□□□□ 0.01
TMEM53-208ENST00000476724 GPR143P51810 404 aa15.13■□□□□ 0.01
TMEM53-208ENST00000476724 ATP12AP54707 1039 aa15.13■□□□□ 0.01
TMEM53-208ENST00000476724 IL18Q14116 193 aa15.13■□□□□ 0.01
TMEM53-208ENST00000476724 FAM53BQ14153 422 aa15.13■□□□□ 0.01
TMEM53-208ENST00000476724 HBMQ6B0K9 141 aa15.13■□□□□ 0.01
TMEM53-208ENST00000476724 OR6C4Q8NGE1 309 aa15.13■□□□□ 0.01
TMEM53-208ENST00000476724 TCTN2Q96GX1 697 aa15.13■□□□□ 0.01
TMEM53-208ENST00000476724 ZC3HAV1LQ96H79 300 aaKnown RBP15.13■□□□□ 0.01
TMEM53-208ENST00000476724 PTCHD1Q96NR3 888 aa15.13■□□□□ 0.01
TMEM53-208ENST00000476724 NECAB3Q96P71 396 aaPredicted RBP15.13■□□□□ 0.01
TMEM53-208ENST00000476724 UBL7Q96S82 380 aaPredicted RBP15.13■□□□□ 0.01
TMEM53-208ENST00000476724 TBX5Q99593 518 aa15.13■□□□□ 0.01
TMEM53-208ENST00000476724 PRTFDC1Q9NRG1 225 aa15.13■□□□□ 0.01
TMEM53-208ENST00000476724 SIRT4Q9Y6E7 314 aaPredicted RBP15.13■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms