RNA–Protein interactions for RNA: ENST00000476367.5

CCNL1-217, Transcript of cyclin L1, humanhuman

TSL 1 (best)

Gene CCNL1, Length 1,603 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNL1-217ENST00000476367 CHMP24386 653 aa12.99□□□□□ -0.33
CCNL1-217ENST00000476367 SESN3P58005 492 aa12.99□□□□□ -0.33
CCNL1-217ENST00000476367 TRAP1Q12931 704 aaKnown RBP12.99□□□□□ -0.33
CCNL1-217ENST00000476367 QPRTQ15274 297 aa12.99□□□□□ -0.33
CCNL1-217ENST00000476367 SLC25A53Q5H9E4 307 aa12.99□□□□□ -0.33
CCNL1-217ENST00000476367 RELTQ969Z4 430 aa12.99□□□□□ -0.33
CCNL1-217ENST00000476367 FAM162AQ96A26 154 aa12.99□□□□□ -0.33
CCNL1-217ENST00000476367 ZBTB8AQ96BR9 441 aa12.99□□□□□ -0.33
CCNL1-217ENST00000476367 HSH2DQ96JZ2 352 aa12.99□□□□□ -0.33
CCNL1-217ENST00000476367 AMBRA1Q9C0C7 1298 aa12.99□□□□□ -0.33
CCNL1-217ENST00000476367 TMEM185BQ9H7F4 350 aa12.99□□□□□ -0.33
CCNL1-217ENST00000476367 SH3GLB1Q9Y371 365 aa12.99□□□□□ -0.33
CCNL1-217ENST00000476367 H0Y3Z8 333 aa12.98□□□□□ -0.33
CCNL1-217ENST00000476367 LYPD3O95274 346 aa12.98□□□□□ -0.33
CCNL1-217ENST00000476367 ZNF17P17021 662 aa12.98□□□□□ -0.33
CCNL1-217ENST00000476367 PGCP20142 388 aa12.98□□□□□ -0.33
CCNL1-217ENST00000476367 ACVR2AP27037 513 aa12.98□□□□□ -0.33
CCNL1-217ENST00000476367 LHX2P50458 406 aa12.98□□□□□ -0.33
CCNL1-217ENST00000476367 CLDN15P56746 228 aa12.98□□□□□ -0.33
CCNL1-217ENST00000476367 GTPBP8Q8N3Z3 284 aaPredicted RBP12.98□□□□□ -0.33
CCNL1-217ENST00000476367 FAM26EQ8N5C1 309 aa12.98□□□□□ -0.33
CCNL1-217ENST00000476367 LSMEM1Q8N8F7 131 aa12.98□□□□□ -0.33
CCNL1-217ENST00000476367 WDYHV1Q96HA8 205 aa12.98□□□□□ -0.33
CCNL1-217ENST00000476367 TPD52L3Q96J77 140 aa12.98□□□□□ -0.33
CCNL1-217ENST00000476367 PRDM14Q9GZV8 571 aa12.98□□□□□ -0.33
CCNL1-217ENST00000476367 ADAM19Q9H013 955 aa12.98□□□□□ -0.33
CCNL1-217ENST00000476367 MMADHCQ9H3L0 296 aaPredicted RBP12.98□□□□□ -0.33
CCNL1-217ENST00000476367 MEMO1Q9Y316 297 aa12.98□□□□□ -0.33
CCNL1-217ENST00000476367 ZNF337Q9Y3M9 751 aa12.98□□□□□ -0.33
CCNL1-217ENST00000476367 USP9XQ93008 2570 aaPredicted RBP12.98□□□□□ -0.33
CCNL1-217ENST00000476367 NCOA6Q14686 2063 aaPredicted RBP12.97□□□□□ -0.33
CCNL1-217ENST00000476367 TNFSF12-TNFSF13A0A0A6YY99 330 aa12.97□□□□□ -0.33
CCNL1-217ENST00000476367 C7orf72A4D263 438 aa12.97□□□□□ -0.33
CCNL1-217ENST00000476367 FFAR1O14842 300 aa12.97□□□□□ -0.33
CCNL1-217ENST00000476367 WDR1O75083 606 aa12.97□□□□□ -0.33
CCNL1-217ENST00000476367 PRSS23O95084 383 aa12.97□□□□□ -0.33
CCNL1-217ENST00000476367 ZNF682O95780 498 aa12.97□□□□□ -0.33
CCNL1-217ENST00000476367 RNF224P0DH78 156 aa12.97□□□□□ -0.33
CCNL1-217ENST00000476367 PEPDP12955 493 aa12.97□□□□□ -0.33
CCNL1-217ENST00000476367 ZNF708P17019 499 aa12.97□□□□□ -0.33
CCNL1-217ENST00000476367 IDH2P48735 452 aaKnown RBP12.97□□□□□ -0.33
CCNL1-217ENST00000476367 ERFP50548 548 aa12.97□□□□□ -0.33
CCNL1-217ENST00000476367 CLDN18P56856 261 aa12.97□□□□□ -0.33
CCNL1-217ENST00000476367 VLDLRP98155 873 aa12.97□□□□□ -0.33
CCNL1-217ENST00000476367 ZSWIM7Q19AV6 140 aa12.97□□□□□ -0.33
CCNL1-217ENST00000476367 GLYR1Q49A26 553 aaPredicted RBP12.97□□□□□ -0.33
CCNL1-217ENST00000476367 C1orf185Q5T7R7 199 aa12.97□□□□□ -0.33
CCNL1-217ENST00000476367 POMZP3Q6PJE2 187 aa12.97□□□□□ -0.33
CCNL1-217ENST00000476367 CARM1Q86X55 608 aa12.97□□□□□ -0.33
CCNL1-217ENST00000476367 DHFR2Q86XF0 187 aa12.97□□□□□ -0.33
CCNL1-217ENST00000476367 PM20D2Q8IYS1 436 aa12.97□□□□□ -0.33
CCNL1-217ENST00000476367 BHLHE22Q8NFJ8 381 aaPredicted RBP12.97□□□□□ -0.33
CCNL1-217ENST00000476367 ZNF563Q8TA94 476 aa12.97□□□□□ -0.33
CCNL1-217ENST00000476367 VANGL1Q8TAA9 524 aaPredicted RBP12.97□□□□□ -0.33
CCNL1-217ENST00000476367 SLC26A7Q8TE54 656 aa12.97□□□□□ -0.33
CCNL1-217ENST00000476367 RASSF5Q8WWW0 418 aa12.97□□□□□ -0.33
CCNL1-217ENST00000476367 MCUR1Q96AQ8 359 aa12.97□□□□□ -0.33
CCNL1-217ENST00000476367 CCDC120Q96HB5 630 aa12.97□□□□□ -0.33
CCNL1-217ENST00000476367 NSMCE2Q96MF7 247 aa12.97□□□□□ -0.33
CCNL1-217ENST00000476367 MUC13Q9H3R2 512 aa12.97□□□□□ -0.33
CCNL1-217ENST00000476367 FAM215AQ9Y5M1 114 aa12.97□□□□□ -0.33
CCNL1-217ENST00000476367 V9GYQ6 96 aa12.97□□□□□ -0.33
CCNL1-217ENST00000476367 KDM4EB2RXH2 506 aaPredicted RBP12.96□□□□□ -0.33
CCNL1-217ENST00000476367 ANKRD65E5RJM6 399 aa12.96□□□□□ -0.33
CCNL1-217ENST00000476367 E9PLN8 166 aa12.96□□□□□ -0.33
CCNL1-217ENST00000476367 H0YC42 278 aa12.96□□□□□ -0.33
CCNL1-217ENST00000476367 J3KTA2 159 aa12.96□□□□□ -0.33
CCNL1-217ENST00000476367 ZG16O60844 167 aa12.96□□□□□ -0.33
CCNL1-217ENST00000476367 OPN1LWP04000 364 aa12.96□□□□□ -0.33
CCNL1-217ENST00000476367 GABRA1P14867 456 aa12.96□□□□□ -0.33
CCNL1-217ENST00000476367 SHC1P29353 583 aa12.96□□□□□ -0.33
CCNL1-217ENST00000476367 TPD52P55327 224 aaPredicted RBP12.96□□□□□ -0.33
CCNL1-217ENST00000476367 PER3P56645 1201 aa12.96□□□□□ -0.33
CCNL1-217ENST00000476367 CLDN20P56880 219 aa12.96□□□□□ -0.33
CCNL1-217ENST00000476367 RTL6Q6ICC9 239 aa12.96□□□□□ -0.33
CCNL1-217ENST00000476367 ADGRG3Q86Y34 549 aa12.96□□□□□ -0.33
CCNL1-217ENST00000476367 ZNF440Q8IYI8 595 aa12.96□□□□□ -0.33
CCNL1-217ENST00000476367 EID3Q8N140 333 aa12.96□□□□□ -0.33
CCNL1-217ENST00000476367 MARVELD2Q8N4S9 558 aa12.96□□□□□ -0.33
CCNL1-217ENST00000476367 C3orf49Q96BT1 292 aa12.96□□□□□ -0.33
CCNL1-217ENST00000476367 PYURFQ96I23 114 aa12.96□□□□□ -0.33
CCNL1-217ENST00000476367 DMRTA2Q96SC8 542 aa12.96□□□□□ -0.33
CCNL1-217ENST00000476367 VKORC1Q9BQB6 163 aa12.96□□□□□ -0.33
CCNL1-217ENST00000476367 ARMC7Q9H6L4 198 aa12.96□□□□□ -0.33
CCNL1-217ENST00000476367 ACER3Q9NUN7 267 aa12.96□□□□□ -0.33
CCNL1-217ENST00000476367 ADPRHL2Q9NX46 363 aa12.96□□□□□ -0.33
CCNL1-217ENST00000476367 BAG5Q9UL15 447 aa12.96□□□□□ -0.33
CCNL1-217ENST00000476367 A4GNTQ9UNA3 340 aa12.96□□□□□ -0.33
CCNL1-217ENST00000476367 DOCK7Q96N67 2140 aa12.96□□□□□ -0.33
CCNL1-217ENST00000476367 DOPEY2Q9Y3R5 2298 aa12.95□□□□□ -0.34
CCNL1-217ENST00000476367 TCRBV3S1A0A5B6 114 aa12.95□□□□□ -0.34
CCNL1-217ENST00000476367 CLEC18AA5D8T8 446 aa12.95□□□□□ -0.34
CCNL1-217ENST00000476367 IFNA14P01570 189 aa12.95□□□□□ -0.34
CCNL1-217ENST00000476367 SFTPDP35247 375 aa12.95□□□□□ -0.34
CCNL1-217ENST00000476367 EIF1P41567 113 aaKnown RBP12.95□□□□□ -0.34
CCNL1-217ENST00000476367 SLC6A8P48029 635 aa12.95□□□□□ -0.34
CCNL1-217ENST00000476367 RGS8P57771 180 aaPredicted RBP12.95□□□□□ -0.34
CCNL1-217ENST00000476367 CCNIQ14094 377 aa12.95□□□□□ -0.34
CCNL1-217ENST00000476367 ACSF3Q4G176 576 aaPredicted RBP12.95□□□□□ -0.34
CCNL1-217ENST00000476367 PLXDC2Q6UX71 529 aa12.95□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 68.8 ms