RNA–Protein interactions for RNA: ENST00000476267.1

MRPL55-228, Transcript of mitochondrial ribosomal protein L55, humanhuman

TSL 3

Gene MRPL55, Length 169 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-228ENST00000476267 CLDN8P56748 225 aa11.56□□□□□ -0.56
MRPL55-228ENST00000476267 GPR68Q15743 365 aa11.56□□□□□ -0.56
MRPL55-228ENST00000476267 STK11Q15831 433 aa11.56□□□□□ -0.56
MRPL55-228ENST00000476267 SYT14P1Q58G82 188 aa11.56□□□□□ -0.56
MRPL55-228ENST00000476267 TYW3Q6IPR3 259 aaKnown RBP11.56□□□□□ -0.56
MRPL55-228ENST00000476267 CSPG4Q6UVK1 2322 aa11.56□□□□□ -0.56
MRPL55-228ENST00000476267 GALNT5Q7Z7M9 940 aa11.56□□□□□ -0.56
MRPL55-228ENST00000476267 P2RY8Q86VZ1 359 aa11.56□□□□□ -0.56
MRPL55-228ENST00000476267 HIPK1Q86Z02 1210 aa11.56□□□□□ -0.56
MRPL55-228ENST00000476267 RIBC1Q8N443 379 aaPredicted RBP11.56□□□□□ -0.56
MRPL55-228ENST00000476267 OIT3Q8WWZ8 545 aa11.56□□□□□ -0.56
MRPL55-228ENST00000476267 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP11.56□□□□□ -0.56
MRPL55-228ENST00000476267 PRPF18Q99633 342 aaKnown RBP11.56□□□□□ -0.56
MRPL55-228ENST00000476267 SAP130Q9H0E3 1048 aa11.56□□□□□ -0.56
MRPL55-228ENST00000476267 MKLN1Q9UL63 735 aa11.56□□□□□ -0.56
MRPL55-228ENST00000476267 B3GALT5Q9Y2C3 310 aa11.56□□□□□ -0.56
MRPL55-228ENST00000476267 IGHV4-30-2A0A087WSY4 118 aa11.55□□□□□ -0.56
MRPL55-228ENST00000476267 RNF103-CHMP3A0A140T963 221 aa11.55□□□□□ -0.56
MRPL55-228ENST00000476267 DUXAA6NLW8 204 aa11.55□□□□□ -0.56
MRPL55-228ENST00000476267 PDLIM1O00151 329 aa11.55□□□□□ -0.56
MRPL55-228ENST00000476267 RNASET2O00584 256 aaKnown RBP11.55□□□□□ -0.56
MRPL55-228ENST00000476267 SPAG7O75391 227 aa11.55□□□□□ -0.56
MRPL55-228ENST00000476267 CSTAP01040 98 aa11.55□□□□□ -0.56
MRPL55-228ENST00000476267 BPGMP07738 259 aa11.55□□□□□ -0.56
MRPL55-228ENST00000476267 UBTFL6P0CB48 400 aaPredicted RBP11.55□□□□□ -0.56
MRPL55-228ENST00000476267 CREB1P16220 341 aa11.55□□□□□ -0.56
MRPL55-228ENST00000476267 PGCP20142 388 aa11.55□□□□□ -0.56
MRPL55-228ENST00000476267 SOAT1P35610 550 aa11.55□□□□□ -0.56
MRPL55-228ENST00000476267 SLC16A1P53985 500 aa11.55□□□□□ -0.56
MRPL55-228ENST00000476267 CSNK2A1P68400 391 aaPredicted RBP11.55□□□□□ -0.56
MRPL55-228ENST00000476267 PHC1P78364 1004 aa11.55□□□□□ -0.56
MRPL55-228ENST00000476267 IRX1P78414 480 aaPredicted RBP11.55□□□□□ -0.56
MRPL55-228ENST00000476267 EMX2Q04743 252 aa11.55□□□□□ -0.56
MRPL55-228ENST00000476267 SPOCK1Q08629 439 aa11.55□□□□□ -0.56
MRPL55-228ENST00000476267 MERTKQ12866 999 aa11.55□□□□□ -0.56
MRPL55-228ENST00000476267 SMU1Q2TAY7 513 aa11.55□□□□□ -0.56
MRPL55-228ENST00000476267 FBXW9Q5XUX1 488 aa11.55□□□□□ -0.56
MRPL55-228ENST00000476267 OR4F3Q6IEY1 312 aa11.55□□□□□ -0.56
MRPL55-228ENST00000476267 BHLHB9Q6PI77 547 aa11.55□□□□□ -0.56
MRPL55-228ENST00000476267 MTDHQ86UE4 582 aaKnown RBP11.55□□□□□ -0.56
MRPL55-228ENST00000476267 OR10H5Q8NGA6 315 aa11.55□□□□□ -0.56
MRPL55-228ENST00000476267 OR8J2Q8NGG1 315 aa11.55□□□□□ -0.56
MRPL55-228ENST00000476267 SLC25A43Q8WUT9 341 aaPredicted RBP11.55□□□□□ -0.56
MRPL55-228ENST00000476267 TMEM234Q8WY98 164 aa11.55□□□□□ -0.56
MRPL55-228ENST00000476267 ARL5BQ96KC2 179 aa11.55□□□□□ -0.56
MRPL55-228ENST00000476267 SLC35G5Q96KT7 338 aa11.55□□□□□ -0.56
MRPL55-228ENST00000476267 OR51I1Q9H343 314 aa11.55□□□□□ -0.56
MRPL55-228ENST00000476267 BARX1Q9HBU1 254 aaPredicted RBP11.55□□□□□ -0.56
MRPL55-228ENST00000476267 FAIMQ9NVQ4 179 aa11.55□□□□□ -0.56
MRPL55-228ENST00000476267 MALT1Q9UDY8 824 aa11.55□□□□□ -0.56
MRPL55-228ENST00000476267 SLC25A15Q9Y619 301 aa11.55□□□□□ -0.56
MRPL55-228ENST00000476267 TLDC2A0PJX2 215 aa11.54□□□□□ -0.56
MRPL55-228ENST00000476267 PRAMEF27A3QJZ7 478 aa11.54□□□□□ -0.56
MRPL55-228ENST00000476267 E7EQL1 145 aa11.54□□□□□ -0.56
MRPL55-228ENST00000476267 SULT2B1O00204 365 aa11.54□□□□□ -0.56
MRPL55-228ENST00000476267 ANKRD28O15084 1053 aa11.54□□□□□ -0.56
MRPL55-228ENST00000476267 CFLARO15519 480 aa11.54□□□□□ -0.56
MRPL55-228ENST00000476267 TYROBPO43914 113 aa11.54□□□□□ -0.56
MRPL55-228ENST00000476267 GPRIN2O60269 458 aa11.54□□□□□ -0.56
MRPL55-228ENST00000476267 RAD51DO75771 328 aa11.54□□□□□ -0.56
MRPL55-228ENST00000476267 PMS2P2O95744 297 aa11.54□□□□□ -0.56
MRPL55-228ENST00000476267 PTNP21246 168 aa11.54□□□□□ -0.56
MRPL55-228ENST00000476267 APOBEC1P41238 236 aaKnown RBP11.54□□□□□ -0.56
MRPL55-228ENST00000476267 FOXG1P55316 489 aaPredicted RBP11.54□□□□□ -0.56
MRPL55-228ENST00000476267 H3F3AP84243 136 aa11.54□□□□□ -0.56
MRPL55-228ENST00000476267 MAD2L1Q13257 205 aaPredicted RBP11.54□□□□□ -0.56
MRPL55-228ENST00000476267 NRF1Q16656 503 aa11.54□□□□□ -0.56
MRPL55-228ENST00000476267 EMBQ6PCB8 327 aa11.54□□□□□ -0.56
MRPL55-228ENST00000476267 B3GLCTQ6Y288 498 aa11.54□□□□□ -0.56
MRPL55-228ENST00000476267 FRRS1Q6ZNA5 592 aa11.54□□□□□ -0.56
MRPL55-228ENST00000476267 EIF3MQ7L2H7 374 aaKnown RBP11.54□□□□□ -0.56
MRPL55-228ENST00000476267 LSRQ86X29 649 aaPredicted RBP11.54□□□□□ -0.56
MRPL55-228ENST00000476267 TUBGCP3Q96CW5 907 aa11.54□□□□□ -0.56
MRPL55-228ENST00000476267 ZG16BQ96DA0 208 aa11.54□□□□□ -0.56
MRPL55-228ENST00000476267 MUCL1Q96DR8 90 aa11.54□□□□□ -0.56
MRPL55-228ENST00000476267 RADILQ96JH8 1075 aa11.54□□□□□ -0.56
MRPL55-228ENST00000476267 HS6ST2Q96MM7 605 aa11.54□□□□□ -0.56
MRPL55-228ENST00000476267 ZIM3Q96PE6 472 aa11.54□□□□□ -0.56
MRPL55-228ENST00000476267 AMBRA1Q9C0C7 1298 aa11.54□□□□□ -0.56
MRPL55-228ENST00000476267 ALG2Q9H553 416 aa11.54□□□□□ -0.56
MRPL55-228ENST00000476267 EXOSC3Q9NQT5 275 aaKnown RBP11.54□□□□□ -0.56
MRPL55-228ENST00000476267 CTPS2Q9NRF8 586 aa11.54□□□□□ -0.56
MRPL55-228ENST00000476267 SERINC1Q9NRX5 453 aa11.54□□□□□ -0.56
MRPL55-228ENST00000476267 NOP53Q9NZM5 478 aaKnown RBP11.54□□□□□ -0.56
MRPL55-228ENST00000476267 NUP214P35658 2090 aaPredicted RBP11.53□□□□□ -0.56
MRPL55-228ENST00000476267 ELOA3DA6NLF2 546 aaPredicted RBP11.53□□□□□ -0.56
MRPL55-228ENST00000476267 DNPH1O43598 174 aa11.53□□□□□ -0.56
MRPL55-228ENST00000476267 SSX4O60224 188 aa11.53□□□□□ -0.56
MRPL55-228ENST00000476267 CYP7B1O75881 506 aa11.53□□□□□ -0.56
MRPL55-228ENST00000476267 IGHV3-9P01782 118 aa11.53□□□□□ -0.56
MRPL55-228ENST00000476267 C1QCP02747 245 aa11.53□□□□□ -0.56
MRPL55-228ENST00000476267 TP53P04637 393 aaPredicted RBP11.53□□□□□ -0.56
MRPL55-228ENST00000476267 ITGA5P08648 1049 aa11.53□□□□□ -0.56
MRPL55-228ENST00000476267 TTKP33981 857 aa11.53□□□□□ -0.56
MRPL55-228ENST00000476267 CASP9P55211 416 aa11.53□□□□□ -0.56
MRPL55-228ENST00000476267 GABRA6Q16445 453 aa11.53□□□□□ -0.56
MRPL55-228ENST00000476267 PGS1Q32NB8 556 aa11.53□□□□□ -0.56
MRPL55-228ENST00000476267 ELOA3BQ3SY89 546 aa11.53□□□□□ -0.56
MRPL55-228ENST00000476267 AGAP6Q5VW22 663 aa11.53□□□□□ -0.56
MRPL55-228ENST00000476267 SAXO2Q658L1 398 aa11.53□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms