RNA–Protein interactions for RNA: ENST00000476215.5

PTCD3-211, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 3

Gene PTCD3, Length 754 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-211ENST00000476215 PPLO60437 1756 aa3.46□□□□□ -1.86
PTCD3-211ENST00000476215 LAMC1P11047 1609 aa3.46□□□□□ -1.86
PTCD3-211ENST00000476215 NHSL1Q5SYE7 1610 aa3.46□□□□□ -1.86
PTCD3-211ENST00000476215 LOC100131303A0A0U1RQF7 123 aa3.46□□□□□ -1.86
PTCD3-211ENST00000476215 HSFX4A0A1B0GTS1 333 aaPredicted RBP3.46□□□□□ -1.86
PTCD3-211ENST00000476215 HSFX3A0A1B0GWH4 333 aaPredicted RBP3.46□□□□□ -1.86
PTCD3-211ENST00000476215 GSAPA4D1B5 854 aa3.46□□□□□ -1.86
PTCD3-211ENST00000476215 TMEM110-MUSTN1A8MSY1 372 aa3.46□□□□□ -1.86
PTCD3-211ENST00000476215 CTAGE5O15320 804 aa3.46□□□□□ -1.86
PTCD3-211ENST00000476215 B3GAT3O94766 335 aa3.46□□□□□ -1.86
PTCD3-211ENST00000476215 F10P00742 488 aa3.46□□□□□ -1.86
PTCD3-211ENST00000476215 KRT6BP04259 564 aa3.46□□□□□ -1.86
PTCD3-211ENST00000476215 SEMG1P04279 462 aa3.46□□□□□ -1.86
PTCD3-211ENST00000476215 CPN1P15169 458 aa3.46□□□□□ -1.86
PTCD3-211ENST00000476215 EPHX2P34913 555 aa3.46□□□□□ -1.86
PTCD3-211ENST00000476215 KRT6CP48668 564 aa3.46□□□□□ -1.86
PTCD3-211ENST00000476215 RIPPLY1Q0D2K3 151 aa3.46□□□□□ -1.86
PTCD3-211ENST00000476215 LAGE3Q14657 143 aa3.46□□□□□ -1.86
PTCD3-211ENST00000476215 AANATQ16613 207 aa3.46□□□□□ -1.86
PTCD3-211ENST00000476215 LRRC36Q1X8D7 754 aa3.46□□□□□ -1.86
PTCD3-211ENST00000476215 USH1GQ495M9 461 aa3.46□□□□□ -1.86
PTCD3-211ENST00000476215 FAHD2BQ6P2I3 314 aaPredicted RBP3.46□□□□□ -1.86
PTCD3-211ENST00000476215 TMEM110Q86TL2 294 aa3.46□□□□□ -1.86
PTCD3-211ENST00000476215 TGIF2LYQ8IUE0 185 aa3.46□□□□□ -1.86
PTCD3-211ENST00000476215 Q8N7P7 452 aa3.46□□□□□ -1.86
PTCD3-211ENST00000476215 AENQ8WTP8 325 aaKnown RBP3.46□□□□□ -1.86
PTCD3-211ENST00000476215 FAHD2AQ96GK7 314 aa3.46□□□□□ -1.86
PTCD3-211ENST00000476215 MS4A14Q96JA4 679 aa3.46□□□□□ -1.86
PTCD3-211ENST00000476215 C4orf36Q96KX1 117 aa3.46□□□□□ -1.86
PTCD3-211ENST00000476215 C16orf45Q96MC5 204 aaPredicted RBP3.46□□□□□ -1.86
PTCD3-211ENST00000476215 TECTBQ96PL2 329 aa3.46□□□□□ -1.86
PTCD3-211ENST00000476215 CYP2S1Q96SQ9 504 aa3.46□□□□□ -1.86
PTCD3-211ENST00000476215 ISG20L2Q9H9L3 353 aaKnown RBP3.46□□□□□ -1.86
PTCD3-211ENST00000476215 LIN28AQ9H9Z2 209 aaKnown RBP3.46□□□□□ -1.86
PTCD3-211ENST00000476215 ADAM22Q9P0K1 906 aa3.46□□□□□ -1.86
PTCD3-211ENST00000476215 ONECUT1Q9UBC0 465 aa3.46□□□□□ -1.86
PTCD3-211ENST00000476215 WDR45Q9Y484 360 aa3.46□□□□□ -1.86
PTCD3-211ENST00000476215 OARD1Q9Y530 152 aa3.46□□□□□ -1.86
PTCD3-211ENST00000476215 SETD1AO15047 1707 aaKnown RBP3.46□□□□□ -1.86
PTCD3-211ENST00000476215 MYOM2P54296 1465 aa3.46□□□□□ -1.86
PTCD3-211ENST00000476215 NALCNQ8IZF0 1738 aa3.45□□□□□ -1.86
PTCD3-211ENST00000476215 TUBAL3A6NHL2 446 aa3.45□□□□□ -1.86
PTCD3-211ENST00000476215 K7EPI3 171 aa3.45□□□□□ -1.86
PTCD3-211ENST00000476215 SMPD2O60906 423 aa3.45□□□□□ -1.86
PTCD3-211ENST00000476215 MFN2O95140 757 aa3.45□□□□□ -1.86
PTCD3-211ENST00000476215 ACTL6AO96019 429 aa3.45□□□□□ -1.86
PTCD3-211ENST00000476215 IGLL1P15814 213 aa3.45□□□□□ -1.86
PTCD3-211ENST00000476215 CALB2P22676 271 aa3.45□□□□□ -1.86
PTCD3-211ENST00000476215 NTSP30990 170 aa3.45□□□□□ -1.86
PTCD3-211ENST00000476215 KIR2DS2P43631 304 aa3.45□□□□□ -1.86
PTCD3-211ENST00000476215 ACADVLP49748 655 aa3.45□□□□□ -1.86
PTCD3-211ENST00000476215 EWSR1Q01844 656 aaKnown RBP eCLIP3.45□□□□□ -1.86
PTCD3-211ENST00000476215 ELAVL3Q14576 367 aaKnown RBP3.45□□□□□ -1.86
PTCD3-211ENST00000476215 TIGITQ495A1 244 aa3.45□□□□□ -1.86
PTCD3-211ENST00000476215 SPATA46Q5T0L3 261 aa3.45□□□□□ -1.86
PTCD3-211ENST00000476215 DNM1P46Q6ZS02 220 aa3.45□□□□□ -1.86
PTCD3-211ENST00000476215 KIAA1328Q86T90 577 aa3.45□□□□□ -1.86
PTCD3-211ENST00000476215 ZNF589Q86UQ0 364 aaPredicted RBP3.45□□□□□ -1.86
PTCD3-211ENST00000476215 PPP1R27Q86WC6 154 aa3.45□□□□□ -1.86
PTCD3-211ENST00000476215 GRAMD2AQ8IUY3 354 aa3.45□□□□□ -1.86
PTCD3-211ENST00000476215 OR10T2Q8NGX3 314 aa3.45□□□□□ -1.86
PTCD3-211ENST00000476215 CITED1Q99966 193 aa3.45□□□□□ -1.86
PTCD3-211ENST00000476215 WRAP73Q9P2S5 460 aaPredicted RBP3.45□□□□□ -1.86
PTCD3-211ENST00000476215 GSTK1Q9Y2Q3 226 aa3.45□□□□□ -1.86
PTCD3-211ENST00000476215 ARHGEF10O15013 1369 aa3.45□□□□□ -1.86
PTCD3-211ENST00000476215 SF3B1O75533 1304 aaKnown RBP eCLIP3.44□□□□□ -1.86
PTCD3-211ENST00000476215 RGS12O14924 1447 aa3.44□□□□□ -1.86
PTCD3-211ENST00000476215 SLIT2O94813 1529 aa3.44□□□□□ -1.86
PTCD3-211ENST00000476215 CDC42BPGQ6DT37 1551 aa3.44□□□□□ -1.86
PTCD3-211ENST00000476215 IGHV7-81A0A0B4J1V7 117 aa3.44□□□□□ -1.86
PTCD3-211ENST00000476215 FAM231BA6NCW3 169 aa3.44□□□□□ -1.86
PTCD3-211ENST00000476215 ASNSP08243 561 aa3.44□□□□□ -1.86
PTCD3-211ENST00000476215 TBXA2RP21731 343 aa3.44□□□□□ -1.86
PTCD3-211ENST00000476215 DRD3P35462 400 aa3.44□□□□□ -1.86
PTCD3-211ENST00000476215 ZNF45Q02386 682 aa3.44□□□□□ -1.86
PTCD3-211ENST00000476215 RAB40BQ12829 278 aa3.44□□□□□ -1.86
PTCD3-211ENST00000476215 SLC5A12Q1EHB4 618 aa3.44□□□□□ -1.86
PTCD3-211ENST00000476215 RIPPLY2Q5TAB7 128 aa3.44□□□□□ -1.86
PTCD3-211ENST00000476215 LIPNQ5VXI9 398 aa3.44□□□□□ -1.86
PTCD3-211ENST00000476215 BLOC1S2Q6QNY1 142 aa3.44□□□□□ -1.86
PTCD3-211ENST00000476215 SKA3Q8IX90 412 aa3.44□□□□□ -1.86
PTCD3-211ENST00000476215 ZNF100Q8IYN0 542 aa3.44□□□□□ -1.86
PTCD3-211ENST00000476215 C15orf54Q8N8G6 183 aa3.44□□□□□ -1.86
PTCD3-211ENST00000476215 DENND6BQ8NEG7 585 aa3.44□□□□□ -1.86
PTCD3-211ENST00000476215 BBS1Q8NFJ9 593 aa3.44□□□□□ -1.86
PTCD3-211ENST00000476215 SETD7Q8WTS6 366 aaKnown RBP3.44□□□□□ -1.86
PTCD3-211ENST00000476215 FRAT1Q92837 279 aaPredicted RBP3.44□□□□□ -1.86
PTCD3-211ENST00000476215 TBC1D31Q96DN5 1066 aa3.44□□□□□ -1.86
PTCD3-211ENST00000476215 CELF6Q96J87 481 aaKnown RBP3.44□□□□□ -1.86
PTCD3-211ENST00000476215 SMIM14Q96QK8 99 aa3.44□□□□□ -1.86
PTCD3-211ENST00000476215 MCHR1Q99705 422 aa3.44□□□□□ -1.86
PTCD3-211ENST00000476215 SLC6A7Q99884 636 aa3.44□□□□□ -1.86
PTCD3-211ENST00000476215 NICN1Q9BSH3 213 aa3.44□□□□□ -1.86
PTCD3-211ENST00000476215 CHIAQ9BZP6 476 aa3.44□□□□□ -1.86
PTCD3-211ENST00000476215 NANSQ9NR45 359 aa3.44□□□□□ -1.86
PTCD3-211ENST00000476215 ANAPC11Q9NYG5 84 aa3.44□□□□□ -1.86
PTCD3-211ENST00000476215 NYAP2Q9P242 653 aa3.44□□□□□ -1.86
PTCD3-211ENST00000476215 ZNF221Q9UK13 617 aa3.44□□□□□ -1.86
PTCD3-211ENST00000476215 UBQLN1Q9UMX0 589 aaKnown RBP3.44□□□□□ -1.86
PTCD3-211ENST00000476215 TNS3Q68CZ2 1445 aa3.44□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms