RNA–Protein interactions for RNA: ENST00000475251.1

SKA3-206, Transcript of spindle and kinetochore associated complex subunit 3, humanhuman

TSL 2

Gene SKA3, Length 397 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA3-206ENST00000475251 ABLIM2Q6H8Q1 611 aa11.06□□□□□ -0.64
SKA3-206ENST00000475251 FRMD7Q6ZUT3 714 aa11.06□□□□□ -0.64
SKA3-206ENST00000475251 C1orf162Q8NEQ5 155 aaPredicted RBP11.06□□□□□ -0.64
SKA3-206ENST00000475251 OR56A1Q8NGH5 318 aa11.06□□□□□ -0.64
SKA3-206ENST00000475251 PIGXQ8TBF5 258 aa11.06□□□□□ -0.64
SKA3-206ENST00000475251 TSSK3Q96PN8 268 aa11.06□□□□□ -0.64
SKA3-206ENST00000475251 PRR14Q9BWN1 585 aa11.06□□□□□ -0.64
SKA3-206ENST00000475251 DCDC2Q9UHG0 476 aa11.06□□□□□ -0.64
SKA3-206ENST00000475251 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP11.06□□□□□ -0.64
SKA3-206ENST00000475251 NPIPA5A0A0B4J1W7 369 aa11.05□□□□□ -0.64
SKA3-206ENST00000475251 NPIPA7E9PJI5 369 aa11.05□□□□□ -0.64
SKA3-206ENST00000475251 OIP5O43482 229 aa11.05□□□□□ -0.64
SKA3-206ENST00000475251 DNPH1O43598 174 aa11.05□□□□□ -0.64
SKA3-206ENST00000475251 H6PDO95479 791 aa11.05□□□□□ -0.64
SKA3-206ENST00000475251 CHEK2O96017 543 aa11.05□□□□□ -0.64
SKA3-206ENST00000475251 IGHV3-9P01782 118 aa11.05□□□□□ -0.64
SKA3-206ENST00000475251 NPIPA8P0DM63 369 aa11.05□□□□□ -0.64
SKA3-206ENST00000475251 SDC1P18827 310 aa11.05□□□□□ -0.64
SKA3-206ENST00000475251 PGCP20142 388 aa11.05□□□□□ -0.64
SKA3-206ENST00000475251 HPCAL1P37235 193 aa11.05□□□□□ -0.64
SKA3-206ENST00000475251 SYT14P1Q58G82 188 aa11.05□□□□□ -0.64
SKA3-206ENST00000475251 DDX59Q5T1V6 619 aaKnown RBP eCLIP11.05□□□□□ -0.64
SKA3-206ENST00000475251 ZYG11AQ6WRX3 759 aa11.05□□□□□ -0.64
SKA3-206ENST00000475251 C12orf54Q6X4T0 127 aa11.05□□□□□ -0.64
SKA3-206ENST00000475251 ALPK2Q86TB3 2170 aa11.05□□□□□ -0.64
SKA3-206ENST00000475251 MEX3DQ86XN8 651 aaKnown RBP11.05□□□□□ -0.64
SKA3-206ENST00000475251 NATD1Q8N6N6 113 aa11.05□□□□□ -0.64
SKA3-206ENST00000475251 C3orf49Q96BT1 292 aa11.05□□□□□ -0.64
SKA3-206ENST00000475251 MOAP1Q96BY2 351 aa11.05□□□□□ -0.64
SKA3-206ENST00000475251 FCRL1Q96LA6 429 aa11.05□□□□□ -0.64
SKA3-206ENST00000475251 ANKZF1Q9H8Y5 726 aa11.05□□□□□ -0.64
SKA3-206ENST00000475251 UPB1Q9UBR1 384 aa11.05□□□□□ -0.64
SKA3-206ENST00000475251 FBXO9Q9UK97 447 aaPredicted RBP11.05□□□□□ -0.64
SKA3-206ENST00000475251 TRAF6Q9Y4K3 522 aa11.05□□□□□ -0.64
SKA3-206ENST00000475251 CCL27Q9Y4X3 112 aa11.05□□□□□ -0.64
SKA3-206ENST00000475251 A0A1W2PR80 420 aa11.04□□□□□ -0.64
SKA3-206ENST00000475251 ZNF716A6NP11 495 aa11.04□□□□□ -0.64
SKA3-206ENST00000475251 NPIPB9F8W1W9 429 aa11.04□□□□□ -0.64
SKA3-206ENST00000475251 ANKRD28O15084 1053 aa11.04□□□□□ -0.64
SKA3-206ENST00000475251 PMS2P2O95744 297 aa11.04□□□□□ -0.64
SKA3-206ENST00000475251 WNT11O96014 354 aa11.04□□□□□ -0.64
SKA3-206ENST00000475251 TFPIP10646 304 aa11.04□□□□□ -0.64
SKA3-206ENST00000475251 ZNF23P17027 643 aa11.04□□□□□ -0.64
SKA3-206ENST00000475251 PCMT1P22061 227 aa11.04□□□□□ -0.64
SKA3-206ENST00000475251 PAX7P23759 505 aa11.04□□□□□ -0.64
SKA3-206ENST00000475251 MAGEA8P43361 318 aa11.04□□□□□ -0.64
SKA3-206ENST00000475251 CCT3P49368 545 aaKnown RBP11.04□□□□□ -0.64
SKA3-206ENST00000475251 RPL38P63173 70 aaKnown RBP11.04□□□□□ -0.64
SKA3-206ENST00000475251 MERTKQ12866 999 aa11.04□□□□□ -0.64
SKA3-206ENST00000475251 TP53BP2Q13625 1128 aa11.04□□□□□ -0.64
SKA3-206ENST00000475251 CARTPTQ16568 116 aa11.04□□□□□ -0.64
SKA3-206ENST00000475251 CR1LQ2VPA4 569 aa11.04□□□□□ -0.64
SKA3-206ENST00000475251 NDUFAF6Q330K2 333 aa11.04□□□□□ -0.64
SKA3-206ENST00000475251 SPDYE7PQ495Y7 208 aa11.04□□□□□ -0.64
SKA3-206ENST00000475251 BHLHB9Q6PI77 547 aa11.04□□□□□ -0.64
SKA3-206ENST00000475251 KLHL24Q6TFL4 600 aa11.04□□□□□ -0.64
SKA3-206ENST00000475251 UGT2A3Q6UWM9 527 aa11.04□□□□□ -0.64
SKA3-206ENST00000475251 RNF165Q6ZSG1 346 aa11.04□□□□□ -0.64
SKA3-206ENST00000475251 FBXO17Q96EF6 278 aa11.04□□□□□ -0.64
SKA3-206ENST00000475251 KCNS3Q9BQ31 491 aa11.04□□□□□ -0.64
SKA3-206ENST00000475251 THUMPD3Q9BV44 507 aaKnown RBP11.04□□□□□ -0.64
SKA3-206ENST00000475251 C1QTNF6Q9BXI9 259 aa11.04□□□□□ -0.64
SKA3-206ENST00000475251 NMUR2Q9GZQ4 415 aa11.04□□□□□ -0.64
SKA3-206ENST00000475251 LAT2Q9GZY6 243 aa11.04□□□□□ -0.64
SKA3-206ENST00000475251 C12orf65Q9H3J6 166 aaKnown RBP11.04□□□□□ -0.64
SKA3-206ENST00000475251 SIRT3Q9NTG7 399 aaPredicted RBP11.04□□□□□ -0.64
SKA3-206ENST00000475251 ATAD3AQ9NVI7 634 aa11.04□□□□□ -0.64
SKA3-206ENST00000475251 PARPBPQ9NWS1 579 aa11.04□□□□□ -0.64
SKA3-206ENST00000475251 DCTN4Q9UJW0 460 aa11.04□□□□□ -0.64
SKA3-206ENST00000475251 PLCE1Q9P212 2302 aa11.03□□□□□ -0.64
SKA3-206ENST00000475251 MALRD1Q5VYJ5 2156 aa11.03□□□□□ -0.64
SKA3-206ENST00000475251 SERINC4A6NH21 518 aa11.03□□□□□ -0.64
SKA3-206ENST00000475251 TMEM114B3SHH9 223 aa11.03□□□□□ -0.64
SKA3-206ENST00000475251 SPRY1O43609 319 aaPredicted RBP11.03□□□□□ -0.64
SKA3-206ENST00000475251 DNAJA2O60884 412 aa11.03□□□□□ -0.64
SKA3-206ENST00000475251 GLRA3O75311 464 aa11.03□□□□□ -0.64
SKA3-206ENST00000475251 CYP7B1O75881 506 aa11.03□□□□□ -0.64
SKA3-206ENST00000475251 LY6HO94772 140 aa11.03□□□□□ -0.64
SKA3-206ENST00000475251 AK1P00568 194 aa11.03□□□□□ -0.64
SKA3-206ENST00000475251 ABHD2P08910 425 aa11.03□□□□□ -0.64
SKA3-206ENST00000475251 MAPK1P28482 360 aa11.03□□□□□ -0.64
SKA3-206ENST00000475251 SRP14P37108 136 aaKnown RBP11.03□□□□□ -0.64
SKA3-206ENST00000475251 APOBEC1P41238 236 aaKnown RBP11.03□□□□□ -0.64
SKA3-206ENST00000475251 CLK1P49759 484 aaKnown RBP11.03□□□□□ -0.64
SKA3-206ENST00000475251 RNF144AP50876 292 aaPredicted RBP11.03□□□□□ -0.64
SKA3-206ENST00000475251 SLC16A1P53985 500 aa11.03□□□□□ -0.64
SKA3-206ENST00000475251 SESN3P58005 492 aa11.03□□□□□ -0.64
SKA3-206ENST00000475251 DNAJB13P59910 316 aa11.03□□□□□ -0.64
SKA3-206ENST00000475251 PRPS1P60891 318 aa11.03□□□□□ -0.64
SKA3-206ENST00000475251 ETF1P62495 437 aaKnown RBP11.03□□□□□ -0.64
SKA3-206ENST00000475251 SKP2Q13309 424 aa11.03□□□□□ -0.64
SKA3-206ENST00000475251 SWI5Q1ZZU3 235 aa11.03□□□□□ -0.64
SKA3-206ENST00000475251 LSM12Q3MHD2 195 aaKnown RBP11.03□□□□□ -0.64
SKA3-206ENST00000475251 CCDC153Q494R4 210 aa11.03□□□□□ -0.64
SKA3-206ENST00000475251 CASP12Q6UXS9 341 aa11.03□□□□□ -0.64
SKA3-206ENST00000475251 SLC46A3Q7Z3Q1 461 aa11.03□□□□□ -0.64
SKA3-206ENST00000475251 CLHC1Q8NHS4 586 aa11.03□□□□□ -0.64
SKA3-206ENST00000475251 PSMA8Q8TAA3 256 aa11.03□□□□□ -0.64
SKA3-206ENST00000475251 SFXN5Q8TD22 340 aa11.03□□□□□ -0.64
SKA3-206ENST00000475251 IFT81Q8WYA0 676 aa11.03□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms