RNA–Protein interactions for RNA: ENST00000474647.1

CCDC78-209, Transcript of coiled-coil domain containing 78, humanhuman

TSL 3

Gene CCDC78, Length 506 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78-209ENST00000474647 RADILQ96JH8 1075 aa12.34□□□□□ -0.43
CCDC78-209ENST00000474647 DHRS9Q9BPW9 319 aa12.34□□□□□ -0.43
CCDC78-209ENST00000474647 SHARPINQ9H0F6 387 aa12.34□□□□□ -0.43
CCDC78-209ENST00000474647 CENPHQ9H3R5 247 aa12.34□□□□□ -0.43
CCDC78-209ENST00000474647 TUBB1Q9H4B7 451 aa12.34□□□□□ -0.43
CCDC78-209ENST00000474647 OXSMQ9NWU1 459 aa12.34□□□□□ -0.43
CCDC78-209ENST00000474647 MKS1Q9NXB0 559 aa12.34□□□□□ -0.43
CCDC78-209ENST00000474647 MGAT4BQ9UQ53 548 aa12.34□□□□□ -0.43
CCDC78-209ENST00000474647 TMED5Q9Y3A6 229 aa12.34□□□□□ -0.43
CCDC78-209ENST00000474647 DTNAQ9Y4J8 743 aa12.34□□□□□ -0.43
CCDC78-209ENST00000474647 ZNF724A8MTY0 619 aa12.33□□□□□ -0.44
CCDC78-209ENST00000474647 PLIN3O60664 434 aa12.33□□□□□ -0.44
CCDC78-209ENST00000474647 KRT16P08779 473 aa12.33□□□□□ -0.44
CCDC78-209ENST00000474647 BCKDHAP12694 445 aa12.33□□□□□ -0.44
CCDC78-209ENST00000474647 CPA3P15088 417 aa12.33□□□□□ -0.44
CCDC78-209ENST00000474647 KRT4P19013 534 aa12.33□□□□□ -0.44
CCDC78-209ENST00000474647 SOAT1P35610 550 aa12.33□□□□□ -0.44
CCDC78-209ENST00000474647 CCT3P49368 545 aaKnown RBP12.33□□□□□ -0.44
CCDC78-209ENST00000474647 DIO1P49895 249 aa12.33□□□□□ -0.44
CCDC78-209ENST00000474647 SRSF2Q01130 221 aaKnown RBP12.33□□□□□ -0.44
CCDC78-209ENST00000474647 LOXL1Q08397 574 aaPredicted RBP12.33□□□□□ -0.44
CCDC78-209ENST00000474647 MLC1Q15049 377 aa12.33□□□□□ -0.44
CCDC78-209ENST00000474647 PDZK1Q5T2W1 519 aa12.33□□□□□ -0.44
CCDC78-209ENST00000474647 AGBL2Q5U5Z8 902 aa12.33□□□□□ -0.44
CCDC78-209ENST00000474647 CYB5R2Q6BCY4 276 aa12.33□□□□□ -0.44
CCDC78-209ENST00000474647 B3GLCTQ6Y288 498 aa12.33□□□□□ -0.44
CCDC78-209ENST00000474647 IL17RELQ6ZVW7 336 aa12.33□□□□□ -0.44
CCDC78-209ENST00000474647 SSX8Q7RTT4 187 aa12.33□□□□□ -0.44
CCDC78-209ENST00000474647 C4orf33Q8N1A6 199 aa12.33□□□□□ -0.44
CCDC78-209ENST00000474647 DEPDC4Q8N2C3 294 aa12.33□□□□□ -0.44
CCDC78-209ENST00000474647 OR5D16Q8NGK9 328 aa12.33□□□□□ -0.44
CCDC78-209ENST00000474647 OR5W2Q8NH69 310 aa12.33□□□□□ -0.44
CCDC78-209ENST00000474647 OR5AK3PQ8NH89 298 aa12.33□□□□□ -0.44
CCDC78-209ENST00000474647 TLCD1Q96CP7 247 aa12.33□□□□□ -0.44
CCDC78-209ENST00000474647 THUMPD3Q9BV44 507 aaKnown RBP12.33□□□□□ -0.44
CCDC78-209ENST00000474647 CHODLQ9H9P2 273 aa12.33□□□□□ -0.44
CCDC78-209ENST00000474647 EMC3Q9P0I2 261 aa12.33□□□□□ -0.44
CCDC78-209ENST00000474647 LPAR3Q9UBY5 353 aa12.33□□□□□ -0.44
CCDC78-209ENST00000474647 GIMAP2Q9UG22 337 aa12.33□□□□□ -0.44
CCDC78-209ENST00000474647 NOSIPQ9Y314 301 aaKnown RBP12.33□□□□□ -0.44
CCDC78-209ENST00000474647 GOLGA8QA0A0J9YX86 632 aa12.32□□□□□ -0.44
CCDC78-209ENST00000474647 GOLGA8OA6NCC3 632 aa12.32□□□□□ -0.44
CCDC78-209ENST00000474647 ELOA3DA6NLF2 546 aaPredicted RBP12.32□□□□□ -0.44
CCDC78-209ENST00000474647 TMEM233B4DJY2 109 aa12.32□□□□□ -0.44
CCDC78-209ENST00000474647 GOLGA8NF8WBI6 632 aa12.32□□□□□ -0.44
CCDC78-209ENST00000474647 SULT2B1O00204 365 aa12.32□□□□□ -0.44
CCDC78-209ENST00000474647 CFLARO15519 480 aa12.32□□□□□ -0.44
CCDC78-209ENST00000474647 EIF4E2O60573 245 aaKnown RBP12.32□□□□□ -0.44
CCDC78-209ENST00000474647 PGM3O95394 542 aa12.32□□□□□ -0.44
CCDC78-209ENST00000474647 C6orf47O95873 294 aa12.32□□□□□ -0.44
CCDC78-209ENST00000474647 TFPIP10646 304 aa12.32□□□□□ -0.44
CCDC78-209ENST00000474647 LAMP1P11279 417 aa12.32□□□□□ -0.44
CCDC78-209ENST00000474647 PTAFRP25105 342 aa12.32□□□□□ -0.44
CCDC78-209ENST00000474647 CD40P25942 277 aa12.32□□□□□ -0.44
CCDC78-209ENST00000474647 RPL3P39023 403 aaKnown RBP12.32□□□□□ -0.44
CCDC78-209ENST00000474647 CCT5P48643 541 aa12.32□□□□□ -0.44
CCDC78-209ENST00000474647 CSNK2A1P68400 391 aaPredicted RBP12.32□□□□□ -0.44
CCDC78-209ENST00000474647 MERTKQ12866 999 aa12.32□□□□□ -0.44
CCDC78-209ENST00000474647 GPR68Q15743 365 aa12.32□□□□□ -0.44
CCDC78-209ENST00000474647 ELOA3BQ3SY89 546 aa12.32□□□□□ -0.44
CCDC78-209ENST00000474647 SLC25A53Q5H9E4 307 aa12.32□□□□□ -0.44
CCDC78-209ENST00000474647 FBXW9Q5XUX1 488 aa12.32□□□□□ -0.44
CCDC78-209ENST00000474647 KANK2Q63ZY3 851 aa12.32□□□□□ -0.44
CCDC78-209ENST00000474647 C10orf107Q8IVU9 208 aa12.32□□□□□ -0.44
CCDC78-209ENST00000474647 ARIH2OSQ8N7S6 290 aa12.32□□□□□ -0.44
CCDC78-209ENST00000474647 GOLGA6L1Q8N7Z2 621 aa12.32□□□□□ -0.44
CCDC78-209ENST00000474647 ELOA3Q8NG57 546 aa12.32□□□□□ -0.44
CCDC78-209ENST00000474647 ZNF75CPQ92670 426 aaPredicted RBP12.32□□□□□ -0.44
CCDC78-209ENST00000474647 APH1AQ96BI3 265 aa12.32□□□□□ -0.44
CCDC78-209ENST00000474647 APOPT1Q96IL0 206 aa12.32□□□□□ -0.44
CCDC78-209ENST00000474647 OR7D2Q96RA2 312 aa12.32□□□□□ -0.44
CCDC78-209ENST00000474647 C19orf24Q9BVV8 132 aa12.32□□□□□ -0.44
CCDC78-209ENST00000474647 C1QTNF6Q9BXI9 259 aa12.32□□□□□ -0.44
CCDC78-209ENST00000474647 SSU72Q9NP77 194 aaKnown RBP12.32□□□□□ -0.44
CCDC78-209ENST00000474647 SERINC1Q9NRX5 453 aa12.32□□□□□ -0.44
CCDC78-209ENST00000474647 GPATCH2Q9NW75 528 aa12.32□□□□□ -0.44
CCDC78-209ENST00000474647 TMEM160Q9NX00 188 aa12.32□□□□□ -0.44
CCDC78-209ENST00000474647 ATP6V1HQ9UI12 483 aa12.32□□□□□ -0.44
CCDC78-209ENST00000474647 TRAF6Q9Y4K3 522 aa12.32□□□□□ -0.44
CCDC78-209ENST00000474647 TMEM114B3SHH9 223 aa12.31□□□□□ -0.44
CCDC78-209ENST00000474647 NPIPB9F8W1W9 429 aa12.31□□□□□ -0.44
CCDC78-209ENST00000474647 COPEO14579 308 aa12.31□□□□□ -0.44
CCDC78-209ENST00000474647 PIP5K1BO14986 540 aa12.31□□□□□ -0.44
CCDC78-209ENST00000474647 LY6HO94772 140 aa12.31□□□□□ -0.44
CCDC78-209ENST00000474647 UBTFL6P0CB48 400 aaPredicted RBP12.31□□□□□ -0.44
CCDC78-209ENST00000474647 IGHV4-31P0DP07 118 aa12.31□□□□□ -0.44
CCDC78-209ENST00000474647 SRD5A1P18405 259 aa12.31□□□□□ -0.44
CCDC78-209ENST00000474647 MAPK1P28482 360 aa12.31□□□□□ -0.44
CCDC78-209ENST00000474647 RPS26P62854 115 aaKnown RBP12.31□□□□□ -0.44
CCDC78-209ENST00000474647 SKP2Q13309 424 aa12.31□□□□□ -0.44
CCDC78-209ENST00000474647 PTGR1Q14914 329 aa12.31□□□□□ -0.44
CCDC78-209ENST00000474647 SYT14P1Q58G82 188 aa12.31□□□□□ -0.44
CCDC78-209ENST00000474647 TTMPQ5BVD1 217 aa12.31□□□□□ -0.44
CCDC78-209ENST00000474647 ABLIM2Q6H8Q1 611 aa12.31□□□□□ -0.44
CCDC78-209ENST00000474647 AGR3Q8TD06 166 aa12.31□□□□□ -0.44
CCDC78-209ENST00000474647 SFXN5Q8TD22 340 aa12.31□□□□□ -0.44
CCDC78-209ENST00000474647 C10orf105Q8TEF2 133 aa12.31□□□□□ -0.44
CCDC78-209ENST00000474647 TWIST2Q8WVJ9 160 aa12.31□□□□□ -0.44
CCDC78-209ENST00000474647 OR5P2Q8WZ92 322 aa12.31□□□□□ -0.44
CCDC78-209ENST00000474647 ZHX1-C8orf76Q96EF9 292 aa12.31□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms