RNA–Protein interactions for RNA: ENST00000474384.2

SNRPB-203, Transcript of small nuclear ribonucleoprotein polypeptides B and B1, humanhuman

TSL 5

Gene SNRPB, Length 985 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPB-203ENST00000474384 ME2P23368 584 aa16.33■□□□□ 0.2
SNRPB-203ENST00000474384 HTR2AP28223 471 aa16.33■□□□□ 0.2
SNRPB-203ENST00000474384 SHC1P29353 583 aa16.33■□□□□ 0.2
SNRPB-203ENST00000474384 SFTPDP35247 375 aa16.33■□□□□ 0.2
SNRPB-203ENST00000474384 APOBEC1P41238 236 aaKnown RBP16.33■□□□□ 0.2
SNRPB-203ENST00000474384 HTR3AP46098 478 aa16.33■□□□□ 0.2
SNRPB-203ENST00000474384 FXNQ16595 210 aa16.33■□□□□ 0.2
SNRPB-203ENST00000474384 C4orf17Q53FE4 359 aa16.33■□□□□ 0.2
SNRPB-203ENST00000474384 RTL6Q6ICC9 239 aa16.33■□□□□ 0.2
SNRPB-203ENST00000474384 GGNQ86UU5 652 aa16.33■□□□□ 0.2
SNRPB-203ENST00000474384 ADGRG3Q86Y34 549 aa16.33■□□□□ 0.2
SNRPB-203ENST00000474384 ARHGAP24Q8N264 748 aa16.33■□□□□ 0.2
SNRPB-203ENST00000474384 RPRMLQ8N4K4 120 aa16.33■□□□□ 0.2
SNRPB-203ENST00000474384 MEIOBQ8N635 442 aa16.33■□□□□ 0.2
SNRPB-203ENST00000474384 OR52E4Q8NGH9 312 aa16.33■□□□□ 0.2
SNRPB-203ENST00000474384 OR6T1Q8NGN1 323 aa16.33■□□□□ 0.2
SNRPB-203ENST00000474384 CLPTM1LQ96KA5 538 aa16.33■□□□□ 0.2
SNRPB-203ENST00000474384 TUBA1CQ9BQE3 449 aa16.33■□□□□ 0.2
SNRPB-203ENST00000474384 ZNF559Q9BR84 538 aa16.33■□□□□ 0.2
SNRPB-203ENST00000474384 BTBD10Q9BSF8 475 aa16.33■□□□□ 0.2
SNRPB-203ENST00000474384 THTPAQ9BU02 230 aa16.33■□□□□ 0.2
SNRPB-203ENST00000474384 EVA1AQ9H8M9 152 aa16.33■□□□□ 0.2
SNRPB-203ENST00000474384 SERINC1Q9NRX5 453 aa16.33■□□□□ 0.2
SNRPB-203ENST00000474384 ADPRHL2Q9NX46 363 aa16.33■□□□□ 0.2
SNRPB-203ENST00000474384 OSGIN1Q9UJX0 560 aa16.33■□□□□ 0.2
SNRPB-203ENST00000474384 PRDM4Q9UKN5 801 aa16.33■□□□□ 0.2
SNRPB-203ENST00000474384 TMED7Q9Y3B3 224 aa16.33■□□□□ 0.2
SNRPB-203ENST00000474384 GCN1Q92616 2671 aaKnown RBP16.33■□□□□ 0.2
SNRPB-203ENST00000474384 HELZ2Q9BYK8 2649 aaKnown RBP16.32■□□□□ 0.2
SNRPB-203ENST00000474384 A0A1B0GUH1 482 aa16.32■□□□□ 0.2
SNRPB-203ENST00000474384 EIF1AYO14602 144 aaKnown RBP16.32■□□□□ 0.2
SNRPB-203ENST00000474384 PDE5AO76074 875 aa16.32■□□□□ 0.2
SNRPB-203ENST00000474384 OR1E2P47887 323 aa16.32■□□□□ 0.2
SNRPB-203ENST00000474384 POLR2HP52434 150 aaKnown RBP16.32■□□□□ 0.2
SNRPB-203ENST00000474384 NCALDP61601 193 aa16.32■□□□□ 0.2
SNRPB-203ENST00000474384 SELENBP1Q13228 472 aa16.32■□□□□ 0.2
SNRPB-203ENST00000474384 NPTX1Q15818 432 aa16.32■□□□□ 0.2
SNRPB-203ENST00000474384 TMEM176BQ3YBM2 270 aaPredicted RBP16.32■□□□□ 0.2
SNRPB-203ENST00000474384 DNAL1Q4LDG9 190 aa16.32■□□□□ 0.2
SNRPB-203ENST00000474384 C1orf185Q5T7R7 199 aa16.32■□□□□ 0.2
SNRPB-203ENST00000474384 NCCRP1Q6ZVX7 275 aaPredicted RBP16.32■□□□□ 0.2
SNRPB-203ENST00000474384 CBLL1Q75N03 491 aa16.32■□□□□ 0.2
SNRPB-203ENST00000474384 RANBP3LQ86VV4 465 aaPredicted RBP16.32■□□□□ 0.2
SNRPB-203ENST00000474384 CARM1Q86X55 608 aa16.32■□□□□ 0.2
SNRPB-203ENST00000474384 LSMEM1Q8N8F7 131 aa16.32■□□□□ 0.2
SNRPB-203ENST00000474384 ZPLD1Q8TCW7 415 aa16.32■□□□□ 0.2
SNRPB-203ENST00000474384 LZICQ8WZA0 190 aa16.32■□□□□ 0.2
SNRPB-203ENST00000474384 MCHR1Q99705 422 aa16.32■□□□□ 0.2
SNRPB-203ENST00000474384 TRIM2Q9C040 744 aa16.32■□□□□ 0.2
SNRPB-203ENST00000474384 RPS6KB2Q9UBS0 482 aa16.32■□□□□ 0.2
SNRPB-203ENST00000474384 TESQ9UGI8 421 aaKnown RBP16.32■□□□□ 0.2
SNRPB-203ENST00000474384 MAGEL2Q9UJ55 1249 aa16.32■□□□□ 0.2
SNRPB-203ENST00000474384 MEMO1Q9Y316 297 aa16.32■□□□□ 0.2
SNRPB-203ENST00000474384 FAM215AQ9Y5M1 114 aa16.32■□□□□ 0.2
SNRPB-203ENST00000474384 A0A0J9YW62 118 aa16.31■□□□□ 0.2
SNRPB-203ENST00000474384 KDM4EB2RXH2 506 aaPredicted RBP16.31■□□□□ 0.2
SNRPB-203ENST00000474384 E9PLN8 166 aa16.31■□□□□ 0.2
SNRPB-203ENST00000474384 TNFSF11O14788 317 aa16.31■□□□□ 0.2
SNRPB-203ENST00000474384 SEMA7AO75326 666 aa16.31■□□□□ 0.2
SNRPB-203ENST00000474384 ATP5HO75947 161 aa16.31■□□□□ 0.2
SNRPB-203ENST00000474384 HOXD4P09016 255 aaPredicted RBP16.31■□□□□ 0.2
SNRPB-203ENST00000474384 CXCR1P25024 350 aa16.31■□□□□ 0.2
SNRPB-203ENST00000474384 KCNC4Q03721 635 aa16.31■□□□□ 0.2
SNRPB-203ENST00000474384 OR1Q1Q15612 314 aa16.31■□□□□ 0.2
SNRPB-203ENST00000474384 ACSF3Q4G176 576 aaPredicted RBP16.31■□□□□ 0.2
SNRPB-203ENST00000474384 C3orf33Q6P1S2 294 aa16.31■□□□□ 0.2
SNRPB-203ENST00000474384 PLXDC2Q6UX71 529 aa16.31■□□□□ 0.2
SNRPB-203ENST00000474384 RPTNQ6XPR3 784 aa16.31■□□□□ 0.2
SNRPB-203ENST00000474384 VTCN1Q7Z7D3 282 aa16.31■□□□□ 0.2
SNRPB-203ENST00000474384 C3orf49Q96BT1 292 aa16.31■□□□□ 0.2
SNRPB-203ENST00000474384 KLHL15Q96M94 604 aa16.31■□□□□ 0.2
SNRPB-203ENST00000474384 TRIB1Q96RU8 372 aa16.31■□□□□ 0.2
SNRPB-203ENST00000474384 VKORC1Q9BQB6 163 aa16.31■□□□□ 0.2
SNRPB-203ENST00000474384 GORASP2Q9H8Y8 452 aa16.31■□□□□ 0.2
SNRPB-203ENST00000474384 TMEM27Q9HBJ8 222 aa16.31■□□□□ 0.2
SNRPB-203ENST00000474384 ZKSCAN7Q9P0L1 754 aaPredicted RBP16.31■□□□□ 0.2
SNRPB-203ENST00000474384 CHRNA9Q9UGM1 479 aa16.31■□□□□ 0.2
SNRPB-203ENST00000474384 ERRFI1Q9UJM3 462 aaPredicted RBP16.31■□□□□ 0.2
SNRPB-203ENST00000474384 SLC5A6Q9Y289 635 aa16.31■□□□□ 0.2
SNRPB-203ENST00000474384 SLC9A8Q9Y2E8 581 aa16.31■□□□□ 0.2
SNRPB-203ENST00000474384 SNX13Q9Y5W8 968 aa16.31■□□□□ 0.2
SNRPB-203ENST00000474384 A0A1B0GWA3 101 aa16.3■□□□□ 0.2
SNRPB-203ENST00000474384 TMEM72A0PK05 275 aa16.3■□□□□ 0.2
SNRPB-203ENST00000474384 GJE1A6NN92 205 aa16.3■□□□□ 0.2
SNRPB-203ENST00000474384 CLCA1A8K7I4 914 aa16.3■□□□□ 0.2
SNRPB-203ENST00000474384 ARPC2O15144 300 aa16.3■□□□□ 0.2
SNRPB-203ENST00000474384 ADAMDEC1O15204 470 aa16.3■□□□□ 0.2
SNRPB-203ENST00000474384 PTGER4P35408 488 aa16.3■□□□□ 0.2
SNRPB-203ENST00000474384 EIF1AXP47813 144 aaKnown RBP16.3■□□□□ 0.2
SNRPB-203ENST00000474384 BNIP2Q12982 314 aa16.3■□□□□ 0.2
SNRPB-203ENST00000474384 SF3B4Q15427 424 aaKnown RBP eCLIP16.3■□□□□ 0.22e-9■■■■□ 22.1
SNRPB-203ENST00000474384 CTU2Q2VPK5 515 aaKnown RBP16.3■□□□□ 0.2
SNRPB-203ENST00000474384 B3GNT6Q6ZMB0 384 aa16.3■□□□□ 0.2
SNRPB-203ENST00000474384 ESPNLQ6ZVH7 1005 aa16.3■□□□□ 0.2
SNRPB-203ENST00000474384 CHMP1BQ7LBR1 199 aa16.3■□□□□ 0.2
SNRPB-203ENST00000474384 MARVELD2Q8N4S9 558 aa16.3■□□□□ 0.2
SNRPB-203ENST00000474384 ZNF845Q96IR2 970 aaPredicted RBP16.3■□□□□ 0.2
SNRPB-203ENST00000474384 ADGRG7Q96K78 797 aa16.3■□□□□ 0.2
SNRPB-203ENST00000474384 DMRTA2Q96SC8 542 aa16.3■□□□□ 0.2
SNRPB-203ENST00000474384 DCAF13Q9NV06 445 aaKnown RBP16.3■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms