RNA–Protein interactions for RNA: ENST00000474289.6

ECHDC1-214, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

APPRIS P3 TSL 5 BASIC

Gene ECHDC1, Length 2,443 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-214ENST00000474289 BPIFCQ8NFQ6 507 aa17.23■□□□□ 0.35
ECHDC1-214ENST00000474289 OR6K3Q8NGY3 331 aa17.23■□□□□ 0.35
ECHDC1-214ENST00000474289 FIBINQ8TAL6 211 aa17.23■□□□□ 0.35
ECHDC1-214ENST00000474289 FCAMRQ8WWV6 532 aa17.23■□□□□ 0.35
ECHDC1-214ENST00000474289 ZNF689Q96CS4 500 aaPredicted RBP17.23■□□□□ 0.35
ECHDC1-214ENST00000474289 C1QTNF2Q9BXJ5 285 aa17.23■□□□□ 0.35
ECHDC1-214ENST00000474289 SLC25A32Q9H2D1 315 aa17.23■□□□□ 0.35
ECHDC1-214ENST00000474289 ADGRL4Q9HBW9 690 aa17.23■□□□□ 0.35
ECHDC1-214ENST00000474289 YIPF1Q9Y548 306 aa17.23■□□□□ 0.35
ECHDC1-214ENST00000474289 SLC22A31A6NKX4 558 aa17.23■□□□□ 0.35
ECHDC1-214ENST00000474289 BHLHE40O14503 412 aa17.23■□□□□ 0.35
ECHDC1-214ENST00000474289 PRKRAO75569 313 aaKnown RBP17.23■□□□□ 0.35
ECHDC1-214ENST00000474289 ARL6IP5O75915 188 aa17.23■□□□□ 0.35
ECHDC1-214ENST00000474289 VSIG10L2P0DP72 767 aa17.23■□□□□ 0.35
ECHDC1-214ENST00000474289 CLUP10909 449 aa17.23■□□□□ 0.35
ECHDC1-214ENST00000474289 FLT3LGP49771 235 aa17.23■□□□□ 0.35
ECHDC1-214ENST00000474289 COL9A2Q14055 689 aaPredicted RBP17.23■□□□□ 0.35
ECHDC1-214ENST00000474289 GDPD4Q6W3E5 623 aa17.23■□□□□ 0.35
ECHDC1-214ENST00000474289 NUDT13Q86X67 352 aa17.23■□□□□ 0.35
ECHDC1-214ENST00000474289 RFLNBQ8N5W9 214 aa17.23■□□□□ 0.35
ECHDC1-214ENST00000474289 ZNF707Q96C28 371 aaPredicted RBP17.23■□□□□ 0.35
ECHDC1-214ENST00000474289 PAWRQ96IZ0 340 aaKnown RBP17.23■□□□□ 0.35
ECHDC1-214ENST00000474289 OR14A2Q96R54 314 aa17.23■□□□□ 0.35
ECHDC1-214ENST00000474289 MCHR1Q99705 422 aa17.23■□□□□ 0.35
ECHDC1-214ENST00000474289 VN1R3Q9BXE9 311 aa17.23■□□□□ 0.35
ECHDC1-214ENST00000474289 ZNF768Q9H5H4 540 aaKnown RBP17.23■□□□□ 0.35
ECHDC1-214ENST00000474289 TAS2R3Q9NYW6 316 aa17.23■□□□□ 0.35
ECHDC1-214ENST00000474289 PRRC2BQ5JSZ5 2229 aaKnown RBP17.22■□□□□ 0.35
ECHDC1-214ENST00000474289 PYCARD-AS1I3L0S3 204 aa17.22■□□□□ 0.35
ECHDC1-214ENST00000474289 CDC123O75794 336 aaPredicted RBP17.22■□□□□ 0.35
ECHDC1-214ENST00000474289 SERPINA3P01011 423 aa17.22■□□□□ 0.35
ECHDC1-214ENST00000474289 PTH2RP49190 550 aa17.22■□□□□ 0.35
ECHDC1-214ENST00000474289 UBE2MP61081 183 aaKnown RBP17.22■□□□□ 0.35
ECHDC1-214ENST00000474289 FAM74A1Q5RGS3 127 aa17.22■□□□□ 0.35
ECHDC1-214ENST00000474289 HES5Q5TA89 166 aa17.22■□□□□ 0.35
ECHDC1-214ENST00000474289 DCAF12L2Q5VW00 463 aa17.22■□□□□ 0.35
ECHDC1-214ENST00000474289 ZNF764Q96H86 408 aaPredicted RBP17.22■□□□□ 0.35
ECHDC1-214ENST00000474289 NRTNQ99748 197 aa17.22■□□□□ 0.35
ECHDC1-214ENST00000474289 DPH1Q9BZG8 443 aa17.22■□□□□ 0.35
ECHDC1-214ENST00000474289 SLC19A3Q9BZV2 496 aa17.22■□□□□ 0.35
ECHDC1-214ENST00000474289 RHBGQ9H310 441 aa17.22■□□□□ 0.35
ECHDC1-214ENST00000474289 BARX1Q9HBU1 254 aaPredicted RBP17.22■□□□□ 0.35
ECHDC1-214ENST00000474289 MYOFQ9NZM1 2061 aa17.22■□□□□ 0.35
ECHDC1-214ENST00000474289 FEZF1A0PJY2 475 aa17.22■□□□□ 0.35
ECHDC1-214ENST00000474289 GLOD5A6NK44 160 aa17.22■□□□□ 0.35
ECHDC1-214ENST00000474289 FMO6PO60774 539 aa17.22■□□□□ 0.35
ECHDC1-214ENST00000474289 UCHL1P09936 223 aa17.22■□□□□ 0.35
ECHDC1-214ENST00000474289 NOS3P29474 1203 aa17.22■□□□□ 0.35
ECHDC1-214ENST00000474289 LTB4RQ15722 352 aa17.22■□□□□ 0.35
ECHDC1-214ENST00000474289 IGSF11Q5DX21 431 aa17.22■□□□□ 0.35
ECHDC1-214ENST00000474289 SPOUT1Q5T280 376 aaKnown RBP17.22■□□□□ 0.35
ECHDC1-214ENST00000474289 LRRN1Q6UXK5 716 aa17.22■□□□□ 0.35
ECHDC1-214ENST00000474289 EID2Q8N6I1 236 aa17.22■□□□□ 0.35
ECHDC1-214ENST00000474289 ORAI1Q96D31 301 aa17.22■□□□□ 0.35
ECHDC1-214ENST00000474289 PEX11GQ96HA9 241 aa17.22■□□□□ 0.35
ECHDC1-214ENST00000474289 NARS2Q96I59 477 aaKnown RBP17.22■□□□□ 0.35
ECHDC1-214ENST00000474289 CMTM3Q96MX0 182 aa17.22■□□□□ 0.35
ECHDC1-214ENST00000474289 ELAC1Q9H777 363 aaKnown RBP17.22■□□□□ 0.35
ECHDC1-214ENST00000474289 ANKRD10Q9NXR5 420 aa17.22■□□□□ 0.35
ECHDC1-214ENST00000474289 TAS2R10Q9NYW0 307 aa17.22■□□□□ 0.35
ECHDC1-214ENST00000474289 ERVK-19Q9WJR5 959 aa17.22■□□□□ 0.35
ECHDC1-214ENST00000474289 MDC1Q14676 2089 aaKnown RBP17.22■□□□□ 0.35
ECHDC1-214ENST00000474289 F5H5P2 479 aa17.21■□□□□ 0.35
ECHDC1-214ENST00000474289 MAGEB4O15481 346 aaPredicted RBP17.21■□□□□ 0.35
ECHDC1-214ENST00000474289 EGFP01133 1207 aa17.21■□□□□ 0.35
ECHDC1-214ENST00000474289 TEAD1P28347 426 aa17.21■□□□□ 0.35
ECHDC1-214ENST00000474289 GDI2P50395 445 aaKnown RBP17.21■□□□□ 0.35
ECHDC1-214ENST00000474289 TAS2R38P59533 333 aa17.21■□□□□ 0.35
ECHDC1-214ENST00000474289 ELP2Q6IA86 826 aa17.21■□□□□ 0.35
ECHDC1-214ENST00000474289 TMEM88Q6PEY1 159 aa17.21■□□□□ 0.35
ECHDC1-214ENST00000474289 OVCH1Q7RTY7 1134 aa17.21■□□□□ 0.35
ECHDC1-214ENST00000474289 DNAAF1Q8NEP3 725 aa17.21■□□□□ 0.35
ECHDC1-214ENST00000474289 OR52L1Q8NGH7 329 aa17.21■□□□□ 0.35
ECHDC1-214ENST00000474289 SMPDL3BQ92485 455 aa17.21■□□□□ 0.35
ECHDC1-214ENST00000474289 MFRPQ9BY79 579 aa17.21■□□□□ 0.35
ECHDC1-214ENST00000474289 MFFQ9GZY8 342 aa17.21■□□□□ 0.35
ECHDC1-214ENST00000474289 SLC7A7Q9UM01 511 aa17.21■□□□□ 0.35
ECHDC1-214ENST00000474289 UBE2QL1A1L167 161 aa17.21■□□□□ 0.35
ECHDC1-214ENST00000474289 NEDD8-MDP1E9PL57 170 aa17.21■□□□□ 0.35
ECHDC1-214ENST00000474289 PPM1DO15297 605 aa17.21■□□□□ 0.35
ECHDC1-214ENST00000474289 MEOX2P50222 304 aa17.21■□□□□ 0.35
ECHDC1-214ENST00000474289 ANXA11P50995 505 aaKnown RBP17.21■□□□□ 0.35
ECHDC1-214ENST00000474289 RAB13P51153 203 aa17.21■□□□□ 0.35
ECHDC1-214ENST00000474289 RPS11P62280 158 aaKnown RBP eCLIP17.21■□□□□ 0.35
ECHDC1-214ENST00000474289 TP53I3Q53FA7 332 aa17.21■□□□□ 0.35
ECHDC1-214ENST00000474289 FCRLBQ6BAA4 426 aa17.21■□□□□ 0.35
ECHDC1-214ENST00000474289 SETD7Q8WTS6 366 aaKnown RBP17.21■□□□□ 0.35
ECHDC1-214ENST00000474289 ARMC5Q96C12 935 aa17.21■□□□□ 0.35
ECHDC1-214ENST00000474289 PBX4Q9BYU1 374 aa17.21■□□□□ 0.35
ECHDC1-214ENST00000474289 ZNF334Q9HCZ1 680 aaPredicted RBP17.21■□□□□ 0.35
ECHDC1-214ENST00000474289 KLF15Q9UIH9 416 aa17.21■□□□□ 0.35
ECHDC1-214ENST00000474289 FBXL4Q9UKA2 621 aa17.21■□□□□ 0.35
ECHDC1-214ENST00000474289 LRFN2Q9ULH4 789 aa17.21■□□□□ 0.35
ECHDC1-214ENST00000474289 A0A1B0GW55 424 aa17.2■□□□□ 0.34
ECHDC1-214ENST00000474289 GOSR2O14653 212 aa17.2■□□□□ 0.34
ECHDC1-214ENST00000474289 APOC1P02654 83 aa17.2■□□□□ 0.34
ECHDC1-214ENST00000474289 DUX4L2P0CJ85 424 aa17.2■□□□□ 0.34
ECHDC1-214ENST00000474289 DUX4L3P0CJ86 424 aa17.2■□□□□ 0.34
ECHDC1-214ENST00000474289 DUX4L4P0CJ87 422 aa17.2■□□□□ 0.34
ECHDC1-214ENST00000474289 DUX4L5P0CJ88 424 aa17.2■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms