RNA–Protein interactions for RNA: ENST00000474272.1

TMEM50B-208, Transcript of transmembrane protein 50B, human

TSL 3

Gene TMEM50B, Length 518 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TMEM50B-208	ENST00000474272	RIMBP3	Q9UFD9	1639 aa		2.57	□□□□□ -2
TMEM50B-208	ENST00000474272	NRXN3	Q9Y4C0	1643 aa		2.57	□□□□□ -2
TMEM50B-208	ENST00000474272	KLF18	A0A0U1RQI7	1052 aa		2.56	□□□□□ -2
TMEM50B-208	ENST00000474272		A0A1B0GVL5	298 aa		2.56	□□□□□ -2
TMEM50B-208	ENST00000474272	MPHOSPH10	O00566	681 aa	Known RBP	2.56	□□□□□ -2
TMEM50B-208	ENST00000474272	CPLX1	O14810	134 aa		2.56	□□□□□ -2
TMEM50B-208	ENST00000474272	TRIM3	O75382	744 aa	Predicted RBP	2.56	□□□□□ -2
TMEM50B-208	ENST00000474272	ANP32D	O95626	131 aa		2.56	□□□□□ -2
TMEM50B-208	ENST00000474272	PRB2	P02812	416 aa	Predicted RBP	2.56	□□□□□ -2
TMEM50B-208	ENST00000474272	OPN1LW	P04000	364 aa		2.56	□□□□□ -2
TMEM50B-208	ENST00000474272	HEXB	P07686	556 aa		2.56	□□□□□ -2
TMEM50B-208	ENST00000474272	CD55	P08174	381 aa		2.56	□□□□□ -2
TMEM50B-208	ENST00000474272	UQCRFS1P1	P0C7P4	283 aa		2.56	□□□□□ -2
TMEM50B-208	ENST00000474272	TOP1	P11387	765 aa	Known RBP	2.56	□□□□□ -2
TMEM50B-208	ENST00000474272	TNNI3	P19429	210 aa		2.56	□□□□□ -2
TMEM50B-208	ENST00000474272	CASQ1	P31415	396 aa		2.56	□□□□□ -2
TMEM50B-208	ENST00000474272	CDH5	P33151	784 aa	Predicted RBP	2.56	□□□□□ -2
TMEM50B-208	ENST00000474272	MAGEA5	P43359	124 aa		2.56	□□□□□ -2
TMEM50B-208	ENST00000474272	SYK	P43405	635 aa		2.56	□□□□□ -2
TMEM50B-208	ENST00000474272	BDKRB1	P46663	353 aa		2.56	□□□□□ -2
TMEM50B-208	ENST00000474272	ACADVL	P49748	655 aa		2.56	□□□□□ -2
TMEM50B-208	ENST00000474272	HLCS	P50747	726 aa		2.56	□□□□□ -2
TMEM50B-208	ENST00000474272	NDUFA8	P51970	172 aa		2.56	□□□□□ -2
TMEM50B-208	ENST00000474272	OSTN	P61366	133 aa		2.56	□□□□□ -2
TMEM50B-208	ENST00000474272	MAP2K1	Q02750	393 aa	Predicted RBP	2.56	□□□□□ -2
TMEM50B-208	ENST00000474272	CD47	Q08722	323 aa		2.56	□□□□□ -2
TMEM50B-208	ENST00000474272	MAPK6	Q16659	721 aa		2.56	□□□□□ -2
TMEM50B-208	ENST00000474272	CCDC57	Q2TAC2	916 aa		2.56	□□□□□ -2
TMEM50B-208	ENST00000474272	FILIP1L	Q4L180	1135 aa		2.56	□□□□□ -2
TMEM50B-208	ENST00000474272	HSP90B2P	Q58FF3	399 aa		2.56	□□□□□ -2
TMEM50B-208	ENST00000474272	RIPPLY2	Q5TAB7	128 aa		2.56	□□□□□ -2
TMEM50B-208	ENST00000474272	RESP18	Q5W5W9	173 aa		2.56	□□□□□ -2
TMEM50B-208	ENST00000474272	CENPU	Q71F23	418 aa		2.56	□□□□□ -2
TMEM50B-208	ENST00000474272	SERPINA9	Q86WD7	417 aa		2.56	□□□□□ -2
TMEM50B-208	ENST00000474272	EGFL6	Q8IUX8	553 aa		2.56	□□□□□ -2
TMEM50B-208	ENST00000474272	ZBED8	Q8IZ13	594 aa		2.56	□□□□□ -2
TMEM50B-208	ENST00000474272	CENPL	Q8N0S6	344 aa	Predicted RBP	2.56	□□□□□ -2
TMEM50B-208	ENST00000474272	TTC5	Q8N0Z6	440 aa		2.56	□□□□□ -2
TMEM50B-208	ENST00000474272	LINC01561	Q8N1V8	128 aa		2.56	□□□□□ -2
TMEM50B-208	ENST00000474272	C11orf42	Q8N5U0	333 aa		2.56	□□□□□ -2
TMEM50B-208	ENST00000474272	OR2T33	Q8NG76	320 aa		2.56	□□□□□ -2
TMEM50B-208	ENST00000474272	OR9A4	Q8NGU2	314 aa		2.56	□□□□□ -2
TMEM50B-208	ENST00000474272	FAM210A	Q96ND0	272 aa		2.56	□□□□□ -2
TMEM50B-208	ENST00000474272	GSDMA	Q96QA5	445 aa		2.56	□□□□□ -2
TMEM50B-208	ENST00000474272	GPA33	Q99795	319 aa		2.56	□□□□□ -2
TMEM50B-208	ENST00000474272	SLC30A2	Q9BRI3	323 aa		2.56	□□□□□ -2
TMEM50B-208	ENST00000474272	TSSK1B	Q9BXA7	367 aa		2.56	□□□□□ -2
TMEM50B-208	ENST00000474272	SLITRK2	Q9H156	845 aa		2.56	□□□□□ -2
TMEM50B-208	ENST00000474272	GLT8D2	Q9H1C3	349 aa		2.56	□□□□□ -2
TMEM50B-208	ENST00000474272	ZNF275	Q9NSD4	429 aa	Predicted RBP	2.56	□□□□□ -2
TMEM50B-208	ENST00000474272	SLC35D1	Q9NTN3	355 aa		2.56	□□□□□ -2
TMEM50B-208	ENST00000474272	IFNK	Q9P0W0	207 aa		2.56	□□□□□ -2
TMEM50B-208	ENST00000474272	MOK	Q9UQ07	419 aa		2.56	□□□□□ -2
TMEM50B-208	ENST00000474272	CHMP2B	Q9UQN3	213 aa		2.56	□□□□□ -2
TMEM50B-208	ENST00000474272	MRC1	P22897	1456 aa		2.56	□□□□□ -2
TMEM50B-208	ENST00000474272	CEP170B	Q9Y4F5	1589 aa	Predicted RBP	2.56	□□□□□ -2
TMEM50B-208	ENST00000474272	NALCN	Q8IZF0	1738 aa		2.56	□□□□□ -2
TMEM50B-208	ENST00000474272	SIPA1L2	Q9P2F8	1722 aa	Predicted RBP	2.56	□□□□□ -2
TMEM50B-208	ENST00000474272	USP27X	A6NNY8	438 aa		2.55	□□□□□ -2
TMEM50B-208	ENST00000474272	ERVV-1	B6SEH8	477 aa		2.55	□□□□□ -2
TMEM50B-208	ENST00000474272	CLDN5	O00501	218 aa		2.55	□□□□□ -2
TMEM50B-208	ENST00000474272	STX7	O15400	261 aa	Known RBP	2.55	□□□□□ -2
TMEM50B-208	ENST00000474272	ERLIN1	O75477	346 aa		2.55	□□□□□ -2
TMEM50B-208	ENST00000474272	SF3B1	O75533	1304 aa	Known RBP eCLIP	2.55	□□□□□ -2
TMEM50B-208	ENST00000474272	SCRG1	O75711	98 aa		2.55	□□□□□ -2
TMEM50B-208	ENST00000474272	NEBL	O76041	1014 aa		2.55	□□□□□ -2
TMEM50B-208	ENST00000474272	ABCC6	O95255	1503 aa		2.55	□□□□□ -2
TMEM50B-208	ENST00000474272	SMC2	O95347	1197 aa		2.55	□□□□□ -2
TMEM50B-208	ENST00000474272	PGK1	P00558	417 aa		2.55	□□□□□ -2
TMEM50B-208	ENST00000474272	IGF1	P05019	195 aa		2.55	□□□□□ -2
TMEM50B-208	ENST00000474272	PCCA	P05165	728 aa	Predicted RBP	2.55	□□□□□ -2
TMEM50B-208	ENST00000474272	IVL	P07476	585 aa		2.55	□□□□□ -2
TMEM50B-208	ENST00000474272	PNMA6A	P0CW24	399 aa	Predicted RBP	2.55	□□□□□ -2
TMEM50B-208	ENST00000474272	HTR2A	P28223	471 aa		2.55	□□□□□ -2
TMEM50B-208	ENST00000474272	HPD	P32754	393 aa	Predicted RBP	2.55	□□□□□ -2
TMEM50B-208	ENST00000474272	NF2	P35240	595 aa		2.55	□□□□□ -2
TMEM50B-208	ENST00000474272	PPP1R2	P41236	205 aa		2.55	□□□□□ -2
TMEM50B-208	ENST00000474272	GNPDA1	P46926	289 aa		2.55	□□□□□ -2
TMEM50B-208	ENST00000474272	SARNP	P82979	210 aa	Known RBP	2.55	□□□□□ -2
TMEM50B-208	ENST00000474272	SPAG1	Q07617	926 aa		2.55	□□□□□ -2
TMEM50B-208	ENST00000474272	RGS1	Q08116	209 aa		2.55	□□□□□ -2
TMEM50B-208	ENST00000474272	OVGP1	Q12889	678 aa		2.55	□□□□□ -2
TMEM50B-208	ENST00000474272	NID2	Q14112	1375 aa		2.55	□□□□□ -2
TMEM50B-208	ENST00000474272	KCNJ11	Q14654	390 aa		2.55	□□□□□ -2
TMEM50B-208	ENST00000474272	ATXN7L3	Q14CW9	347 aa	Predicted RBP	2.55	□□□□□ -2
TMEM50B-208	ENST00000474272	TEX44	Q53QW1	395 aa		2.55	□□□□□ -2
TMEM50B-208	ENST00000474272	HSP90AA5P	Q58FG0	334 aa		2.55	□□□□□ -2
TMEM50B-208	ENST00000474272	DCST2	Q5T1A1	773 aa		2.55	□□□□□ -2
TMEM50B-208	ENST00000474272	SPECC1L	Q69YQ0	1117 aa		2.55	□□□□□ -2
TMEM50B-208	ENST00000474272	SCYL2	Q6P3W7	929 aa		2.55	□□□□□ -2
TMEM50B-208	ENST00000474272	SYT10	Q6XYQ8	523 aa		2.55	□□□□□ -2
TMEM50B-208	ENST00000474272	USP54	Q70EL1	1684 aa		2.55	□□□□□ -2
TMEM50B-208	ENST00000474272	DPY19L4	Q7Z388	723 aa		2.55	□□□□□ -2
TMEM50B-208	ENST00000474272	ZNF677	Q86XU0	584 aa		2.55	□□□□□ -2
TMEM50B-208	ENST00000474272	XRN1	Q8IZH2	1706 aa	Known RBP	2.55	□□□□□ -2
TMEM50B-208	ENST00000474272	ZSCAN4	Q8NAM6	433 aa	Predicted RBP	2.55	□□□□□ -2
TMEM50B-208	ENST00000474272	OR13F1	Q8NGS4	319 aa		2.55	□□□□□ -2
TMEM50B-208	ENST00000474272	CNIH3	Q8TBE1	160 aa		2.55	□□□□□ -2
TMEM50B-208	ENST00000474272	PSMG2	Q969U7	264 aa		2.55	□□□□□ -2
TMEM50B-208	ENST00000474272	DTNBP1	Q96EV8	351 aa		2.55	□□□□□ -2

Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms