RNA–Protein interactions for RNA: ENST00000473924.1

DDX56-209, Transcript of DEAD-box helicase 56, humanhuman

TSL 5

Gene DDX56, Length 385 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-209ENST00000473924 CALHM2Q9HA72 323 aa11.18□□□□□ -0.62
DDX56-209ENST00000473924 CTPS2Q9NRF8 586 aa11.18□□□□□ -0.62
DDX56-209ENST00000473924 ABCD2Q9UBJ2 740 aa11.18□□□□□ -0.62
DDX56-209ENST00000473924 RPS6KB2Q9UBS0 482 aa11.18□□□□□ -0.62
DDX56-209ENST00000473924 PRDM4Q9UKN5 801 aa11.18□□□□□ -0.62
DDX56-209ENST00000473924 RELNP78509 3460 aa11.18□□□□□ -0.62
DDX56-209ENST00000473924 HIVEP3Q5T1R4 2406 aa11.18□□□□□ -0.62
DDX56-209ENST00000473924 MYO7BQ6PIF6 2116 aa11.17□□□□□ -0.62
DDX56-209ENST00000473924 B2RBV5 119 aa11.17□□□□□ -0.62
DDX56-209ENST00000473924 SYT5O00445 386 aa11.17□□□□□ -0.62
DDX56-209ENST00000473924 TNFSF11O14788 317 aa11.17□□□□□ -0.62
DDX56-209ENST00000473924 EFNA2O43921 213 aa11.17□□□□□ -0.62
DDX56-209ENST00000473924 GMNNO75496 209 aa11.17□□□□□ -0.62
DDX56-209ENST00000473924 SYNGR4O95473 234 aa11.17□□□□□ -0.62
DDX56-209ENST00000473924 IL2RAP01589 272 aa11.17□□□□□ -0.62
DDX56-209ENST00000473924 C8BP07358 591 aa11.17□□□□□ -0.62
DDX56-209ENST00000473924 TFPIP10646 304 aa11.17□□□□□ -0.62
DDX56-209ENST00000473924 CCNA2P20248 432 aa11.17□□□□□ -0.62
DDX56-209ENST00000473924 CXCR1P25024 350 aa11.17□□□□□ -0.62
DDX56-209ENST00000473924 TACR3P29371 465 aa11.17□□□□□ -0.62
DDX56-209ENST00000473924 KDELR2P33947 212 aa11.17□□□□□ -0.62
DDX56-209ENST00000473924 KCNJ5P48544 419 aa11.17□□□□□ -0.62
DDX56-209ENST00000473924 ADORA2A-AS1P86434 159 aa11.17□□□□□ -0.62
DDX56-209ENST00000473924 HBMQ6B0K9 141 aa11.17□□□□□ -0.62
DDX56-209ENST00000473924 XKRXQ6PP77 449 aa11.17□□□□□ -0.62
DDX56-209ENST00000473924 RANBP3LQ86VV4 465 aaPredicted RBP11.17□□□□□ -0.62
DDX56-209ENST00000473924 DEFB107AQ8IZN7 70 aa11.17□□□□□ -0.62
DDX56-209ENST00000473924 RNF148Q8N7C7 305 aa11.17□□□□□ -0.62
DDX56-209ENST00000473924 OR10D3Q8NH80 312 aa11.17□□□□□ -0.62
DDX56-209ENST00000473924 OR2V1Q8NHB1 315 aa11.17□□□□□ -0.62
DDX56-209ENST00000473924 SLC25A43Q8WUT9 341 aaPredicted RBP11.17□□□□□ -0.62
DDX56-209ENST00000473924 PROX1Q92786 737 aa11.17□□□□□ -0.62
DDX56-209ENST00000473924 TAMM41Q96BW9 452 aa11.17□□□□□ -0.62
DDX56-209ENST00000473924 SDCCAG3Q96C92 435 aa11.17□□□□□ -0.62
DDX56-209ENST00000473924 PRRG4Q9BZD6 226 aa11.17□□□□□ -0.62
DDX56-209ENST00000473924 TIGARQ9NQ88 270 aa11.17□□□□□ -0.62
DDX56-209ENST00000473924 PAQR5Q9NXK6 330 aaPredicted RBP11.17□□□□□ -0.62
DDX56-209ENST00000473924 TMEM181Q9P2C4 612 aa11.17□□□□□ -0.62
DDX56-209ENST00000473924 GMPR2Q9P2T1 348 aaKnown RBP11.17□□□□□ -0.62
DDX56-209ENST00000473924 CHRNA9Q9UGM1 479 aa11.17□□□□□ -0.62
DDX56-209ENST00000473924 BAG5Q9UL15 447 aa11.17□□□□□ -0.62
DDX56-209ENST00000473924 FLNCQ14315 2725 aa11.16□□□□□ -0.62
DDX56-209ENST00000473924 TMED7-TICAM2A0A0A6YYA0 188 aa11.16□□□□□ -0.62
DDX56-209ENST00000473924 A0A0J9YW62 118 aa11.16□□□□□ -0.62
DDX56-209ENST00000473924 WIPF3A6NGB9 483 aa11.16□□□□□ -0.62
DDX56-209ENST00000473924 SLC22A20A6NK97 555 aa11.16□□□□□ -0.62
DDX56-209ENST00000473924 KDM4EB2RXH2 506 aaPredicted RBP11.16□□□□□ -0.62
DDX56-209ENST00000473924 CXCR6O00574 342 aa11.16□□□□□ -0.62
DDX56-209ENST00000473924 CXCL13O43927 109 aa11.16□□□□□ -0.62
DDX56-209ENST00000473924 LGI1O95970 557 aa11.16□□□□□ -0.62
DDX56-209ENST00000473924 FESP07332 822 aa11.16□□□□□ -0.62
DDX56-209ENST00000473924 RNF224P0DH78 156 aa11.16□□□□□ -0.62
DDX56-209ENST00000473924 TCN1P20061 433 aaPredicted RBP11.16□□□□□ -0.62
DDX56-209ENST00000473924 FKBP2P26885 142 aaKnown RBP11.16□□□□□ -0.62
DDX56-209ENST00000473924 SHC1P29353 583 aa11.16□□□□□ -0.62
DDX56-209ENST00000473924 TIMP3P35625 211 aa11.16□□□□□ -0.62
DDX56-209ENST00000473924 DLX5P56178 289 aa11.16□□□□□ -0.62
DDX56-209ENST00000473924 CARD18P57730 90 aa11.16□□□□□ -0.62
DDX56-209ENST00000473924 PON3Q15166 354 aa11.16□□□□□ -0.62
DDX56-209ENST00000473924 SAMD4BQ5PRF9 694 aaKnown RBP11.16□□□□□ -0.62
DDX56-209ENST00000473924 RIPPLY2Q5TAB7 128 aa11.16□□□□□ -0.62
DDX56-209ENST00000473924 PLXDC2Q6UX71 529 aa11.16□□□□□ -0.62
DDX56-209ENST00000473924 SEM1Q6ZVN7 128 aa11.16□□□□□ -0.62
DDX56-209ENST00000473924 COMTD1Q86VU5 262 aa11.16□□□□□ -0.62
DDX56-209ENST00000473924 ZNF808Q8N4W9 903 aaPredicted RBP11.16□□□□□ -0.62
DDX56-209ENST00000473924 GPR32P1Q8NGA4 272 aa11.16□□□□□ -0.62
DDX56-209ENST00000473924 OR52E4Q8NGH9 312 aa11.16□□□□□ -0.62
DDX56-209ENST00000473924 VANGL1Q8TAA9 524 aaPredicted RBP11.16□□□□□ -0.62
DDX56-209ENST00000473924 RNF217Q8TC41 542 aa11.16□□□□□ -0.62
DDX56-209ENST00000473924 CA5BP1Q8WTZ4 195 aa11.16□□□□□ -0.62
DDX56-209ENST00000473924 ASB5Q8WWX0 329 aa11.16□□□□□ -0.62
DDX56-209ENST00000473924 OSTF1Q92882 214 aa11.16□□□□□ -0.62
DDX56-209ENST00000473924 WNT2BQ93097 391 aa11.16□□□□□ -0.62
DDX56-209ENST00000473924 DDIT4LQ96D03 193 aa11.16□□□□□ -0.62
DDX56-209ENST00000473924 ZNF845Q96IR2 970 aaPredicted RBP11.16□□□□□ -0.62
DDX56-209ENST00000473924 OR5B2Q96R09 309 aa11.16□□□□□ -0.62
DDX56-209ENST00000473924 CDRT15Q96T59 188 aa11.16□□□□□ -0.62
DDX56-209ENST00000473924 TM9SF2Q99805 663 aa11.16□□□□□ -0.62
DDX56-209ENST00000473924 ZNF559Q9BR84 538 aa11.16□□□□□ -0.62
DDX56-209ENST00000473924 RSPO3Q9BXY4 272 aaPredicted RBP11.16□□□□□ -0.62
DDX56-209ENST00000473924 TRIM2Q9C040 744 aa11.16□□□□□ -0.62
DDX56-209ENST00000473924 TMEM27Q9HBJ8 222 aa11.16□□□□□ -0.62
DDX56-209ENST00000473924 ADPRHL2Q9NX46 363 aa11.16□□□□□ -0.62
DDX56-209ENST00000473924 SELENONQ9NZV5 590 aa11.16□□□□□ -0.62
DDX56-209ENST00000473924 CLCF1Q9UBD9 225 aa11.16□□□□□ -0.62
DDX56-209ENST00000473924 TESQ9UGI8 421 aaKnown RBP11.16□□□□□ -0.62
DDX56-209ENST00000473924 OSGIN1Q9UJX0 560 aa11.16□□□□□ -0.62
DDX56-209ENST00000473924 PACSIN3Q9UKS6 424 aa11.16□□□□□ -0.62
DDX56-209ENST00000473924 MCTS1Q9ULC4 181 aaKnown RBP11.16□□□□□ -0.62
DDX56-209ENST00000473924 RNF6Q9Y252 685 aa11.16□□□□□ -0.62
DDX56-209ENST00000473924 SLC9A8Q9Y2E8 581 aa11.16□□□□□ -0.62
DDX56-209ENST00000473924 TMED7Q9Y3B3 224 aa11.16□□□□□ -0.62
DDX56-209ENST00000473924 PHF3Q92576 2039 aaKnown RBP11.15□□□□□ -0.62
DDX56-209ENST00000473924 A0A0G2JNJ9 132 aa11.15□□□□□ -0.62
DDX56-209ENST00000473924 A0A1W2PNR3 127 aa11.15□□□□□ -0.62
DDX56-209ENST00000473924 MBD3L4A6NDZ8 208 aaPredicted RBP11.15□□□□□ -0.62
DDX56-209ENST00000473924 MBD3L3A6NE82 208 aaPredicted RBP11.15□□□□□ -0.62
DDX56-209ENST00000473924 MBD3L5A6NJ08 208 aaPredicted RBP11.15□□□□□ -0.62
DDX56-209ENST00000473924 HSPB2A8KAH6 182 aa11.15□□□□□ -0.62
DDX56-209ENST00000473924 M0R3H8 397 aa11.15□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms