RNA–Protein interactions for RNA: ENST00000473420.5

CTDSP1-207, Transcript of CTD small phosphatase 1, humanhuman

TSL 3

Gene CTDSP1, Length 922 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP1-207ENST00000473420 CTPS2Q9NRF8 586 aa17.11■□□□□ 0.33
CTDSP1-207ENST00000473420 SNX13Q9Y5W8 968 aa17.11■□□□□ 0.33
CTDSP1-207ENST00000473420 E9PLN8 166 aa17.1■□□□□ 0.33
CTDSP1-207ENST00000473420 PYCARD-AS1I3L0S3 204 aa17.1■□□□□ 0.33
CTDSP1-207ENST00000473420 M0R3H8 397 aa17.1■□□□□ 0.33
CTDSP1-207ENST00000473420 ARPC2O15144 300 aa17.1■□□□□ 0.33
CTDSP1-207ENST00000473420 SERPINA1P01009 418 aa17.1■□□□□ 0.33
CTDSP1-207ENST00000473420 IL11P20809 199 aa17.1■□□□□ 0.33
CTDSP1-207ENST00000473420 TACR3P29371 465 aa17.1■□□□□ 0.33
CTDSP1-207ENST00000473420 HOXC5Q00444 222 aa17.1■□□□□ 0.33
CTDSP1-207ENST00000473420 C1orf185Q5T7R7 199 aa17.1■□□□□ 0.33
CTDSP1-207ENST00000473420 ESPNLQ6ZVH7 1005 aa17.1■□□□□ 0.33
CTDSP1-207ENST00000473420 CADM2Q8N3J6 435 aa17.1■□□□□ 0.33
CTDSP1-207ENST00000473420 OR6T1Q8NGN1 323 aa17.1■□□□□ 0.33
CTDSP1-207ENST00000473420 C3orf49Q96BT1 292 aa17.1■□□□□ 0.33
CTDSP1-207ENST00000473420 KLHL15Q96M94 604 aa17.1■□□□□ 0.33
CTDSP1-207ENST00000473420 VKORC1Q9BQB6 163 aa17.1■□□□□ 0.33
CTDSP1-207ENST00000473420 WFDC6Q9BQY6 131 aa17.1■□□□□ 0.33
CTDSP1-207ENST00000473420 PCDHAC1Q9H158 963 aa17.1■□□□□ 0.33
CTDSP1-207ENST00000473420 DCAF13Q9NV06 445 aaKnown RBP17.1■□□□□ 0.33
CTDSP1-207ENST00000473420 PAQR5Q9NXK6 330 aaPredicted RBP17.1■□□□□ 0.33
CTDSP1-207ENST00000473420 RPS6KB2Q9UBS0 482 aa17.1■□□□□ 0.33
CTDSP1-207ENST00000473420 CHRNA9Q9UGM1 479 aa17.1■□□□□ 0.33
CTDSP1-207ENST00000473420 OSGIN1Q9UJX0 560 aa17.1■□□□□ 0.33
CTDSP1-207ENST00000473420 SAMD4AQ9UPU9 718 aaKnown RBP17.1■□□□□ 0.33
CTDSP1-207ENST00000473420 KIAA1549Q9HCM3 1950 aa17.09■□□□□ 0.33
CTDSP1-207ENST00000473420 TMED7-TICAM2A0A0A6YYA0 188 aa17.09■□□□□ 0.33
CTDSP1-207ENST00000473420 ADAMDEC1O15204 470 aa17.09■□□□□ 0.33
CTDSP1-207ENST00000473420 ZNF208O43345 1280 aa17.09■□□□□ 0.33
CTDSP1-207ENST00000473420 TPST2O60704 377 aa17.09■□□□□ 0.33
CTDSP1-207ENST00000473420 ZNF682O95780 498 aa17.09■□□□□ 0.33
CTDSP1-207ENST00000473420 HTR2AP28223 471 aa17.09■□□□□ 0.33
CTDSP1-207ENST00000473420 CLK1P49759 484 aaKnown RBP17.09■□□□□ 0.33
CTDSP1-207ENST00000473420 SUCLG1P53597 346 aaKnown RBP17.09■□□□□ 0.33
CTDSP1-207ENST00000473420 CLDN15P56746 228 aa17.09■□□□□ 0.33
CTDSP1-207ENST00000473420 CLDN20P56880 219 aa17.09■□□□□ 0.33
CTDSP1-207ENST00000473420 RPS3AP61247 264 aaKnown RBP17.09■□□□□ 0.33
CTDSP1-207ENST00000473420 SRYQ05066 204 aa17.09■□□□□ 0.33
CTDSP1-207ENST00000473420 NPTX1Q15818 432 aa17.09■□□□□ 0.33
CTDSP1-207ENST00000473420 CTU2Q2VPK5 515 aaKnown RBP17.09■□□□□ 0.33
CTDSP1-207ENST00000473420 ACSF3Q4G176 576 aaPredicted RBP17.09■□□□□ 0.33
CTDSP1-207ENST00000473420 PDSS1Q5T2R2 415 aa17.09■□□□□ 0.33
CTDSP1-207ENST00000473420 MTFR2Q6P444 385 aa17.09■□□□□ 0.33
CTDSP1-207ENST00000473420 ADGRE4PQ86SQ3 457 aa17.09■□□□□ 0.33
CTDSP1-207ENST00000473420 CARM1Q86X55 608 aa17.09■□□□□ 0.33
CTDSP1-207ENST00000473420 ADGRG3Q86Y34 549 aa17.09■□□□□ 0.33
CTDSP1-207ENST00000473420 LACC1Q8IV20 430 aa17.09■□□□□ 0.33
CTDSP1-207ENST00000473420 UBQLNLQ8IYU4 475 aa17.09■□□□□ 0.33
CTDSP1-207ENST00000473420 OR4D11Q8NGI4 311 aa17.09■□□□□ 0.33
CTDSP1-207ENST00000473420 VANGL1Q8TAA9 524 aaPredicted RBP17.09■□□□□ 0.33
CTDSP1-207ENST00000473420 PHF10Q8WUB8 498 aaKnown RBP17.09■□□□□ 0.33
CTDSP1-207ENST00000473420 DNAJA4Q8WW22 397 aaPredicted RBP17.09■□□□□ 0.33
CTDSP1-207ENST00000473420 SMPDL3BQ92485 455 aa17.09■□□□□ 0.33
CTDSP1-207ENST00000473420 TPD52L3Q96J77 140 aa17.09■□□□□ 0.33
CTDSP1-207ENST00000473420 ADGRG7Q96K78 797 aa17.09■□□□□ 0.33
CTDSP1-207ENST00000473420 UCN2Q96RP3 112 aa17.09■□□□□ 0.33
CTDSP1-207ENST00000473420 DMRTA2Q96SC8 542 aa17.09■□□□□ 0.33
CTDSP1-207ENST00000473420 MCHR1Q99705 422 aa17.09■□□□□ 0.33
CTDSP1-207ENST00000473420 TUBA1CQ9BQE3 449 aa17.09■□□□□ 0.33
CTDSP1-207ENST00000473420 THTPAQ9BU02 230 aa17.09■□□□□ 0.33
CTDSP1-207ENST00000473420 POLR2J2Q9GZM3 115 aaKnown RBP17.09■□□□□ 0.33
CTDSP1-207ENST00000473420 POLR2J3Q9H1A7 115 aaKnown RBP17.09■□□□□ 0.33
CTDSP1-207ENST00000473420 TMEM27Q9HBJ8 222 aa17.09■□□□□ 0.33
CTDSP1-207ENST00000473420 ZKSCAN7Q9P0L1 754 aaPredicted RBP17.09■□□□□ 0.33
CTDSP1-207ENST00000473420 ACTR3BQ9P1U1 418 aa17.09■□□□□ 0.33
CTDSP1-207ENST00000473420 SH3BGRL2Q9UJC5 107 aa17.09■□□□□ 0.33
CTDSP1-207ENST00000473420 SLC5A6Q9Y289 635 aa17.09■□□□□ 0.33
CTDSP1-207ENST00000473420 MEMO1Q9Y316 297 aa17.09■□□□□ 0.33
CTDSP1-207ENST00000473420 SH3GLB1Q9Y371 365 aa17.09■□□□□ 0.33
CTDSP1-207ENST00000473420 TMED7Q9Y3B3 224 aa17.09■□□□□ 0.33
CTDSP1-207ENST00000473420 FAM215AQ9Y5M1 114 aa17.09■□□□□ 0.33
CTDSP1-207ENST00000473420 HIVEP3Q5T1R4 2406 aa17.08■□□□□ 0.33
CTDSP1-207ENST00000473420 CD8B2A6NJW9 211 aa17.08■□□□□ 0.32
CTDSP1-207ENST00000473420 EBAG9O00559 213 aa17.08■□□□□ 0.32
CTDSP1-207ENST00000473420 CCL21O00585 134 aa17.08■□□□□ 0.32
CTDSP1-207ENST00000473420 EIF1AYO14602 144 aaKnown RBP17.08■□□□□ 0.32
CTDSP1-207ENST00000473420 SEC14L5O43304 696 aa17.08■□□□□ 0.32
CTDSP1-207ENST00000473420 DNAJC8O75937 253 aaPredicted RBP17.08■□□□□ 0.32
CTDSP1-207ENST00000473420 CXCR1P25024 350 aa17.08■□□□□ 0.32
CTDSP1-207ENST00000473420 MSX2P35548 267 aaPredicted RBP17.08■□□□□ 0.32
CTDSP1-207ENST00000473420 TRIM25Q14258 630 aaKnown RBP17.08■□□□□ 0.32
CTDSP1-207ENST00000473420 OR1Q1Q15612 314 aa17.08■□□□□ 0.32
CTDSP1-207ENST00000473420 SYT14P1Q58G82 188 aa17.08■□□□□ 0.32
CTDSP1-207ENST00000473420 MTX3Q5HYI7 312 aa17.08■□□□□ 0.32
CTDSP1-207ENST00000473420 SWT1Q5T5J6 900 aaKnown RBP17.08■□□□□ 0.32
CTDSP1-207ENST00000473420 NSUN5P2Q63ZY6 315 aa17.08■□□□□ 0.32
CTDSP1-207ENST00000473420 RTL6Q6ICC9 239 aa17.08■□□□□ 0.32
CTDSP1-207ENST00000473420 TMEM211Q6ICI0 200 aa17.08■□□□□ 0.32
CTDSP1-207ENST00000473420 ZNF613Q6PF04 617 aa17.08■□□□□ 0.32
CTDSP1-207ENST00000473420 ULK3Q6PHR2 472 aa17.08■□□□□ 0.32
CTDSP1-207ENST00000473420 B3GNT6Q6ZMB0 384 aa17.08■□□□□ 0.32
CTDSP1-207ENST00000473420 ATG4DQ86TL0 474 aaPredicted RBP17.08■□□□□ 0.32
CTDSP1-207ENST00000473420 GEMIN6Q8WXD5 167 aaKnown RBP17.08■□□□□ 0.32
CTDSP1-207ENST00000473420 ASB9Q96DX5 294 aa17.08■□□□□ 0.32
CTDSP1-207ENST00000473420 NSMCE2Q96MF7 247 aa17.08■□□□□ 0.32
CTDSP1-207ENST00000473420 TMEM185BQ9H7F4 350 aa17.08■□□□□ 0.32
CTDSP1-207ENST00000473420 CALHM2Q9HA72 323 aa17.08■□□□□ 0.32
CTDSP1-207ENST00000473420 ALKBH4Q9NXW9 302 aa17.08■□□□□ 0.32
CTDSP1-207ENST00000473420 A0A0B4J2E0 115 aa17.07■□□□□ 0.32
CTDSP1-207ENST00000473420 A0A1B0GWA3 101 aa17.07■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms