RNA–Protein interactions for RNA: ENST00000472044.1

PTCD3-209, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 3

Gene PTCD3, Length 293 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-209ENST00000472044 TTC25Q96NG3 672 aa2.68□□□□□ -1.98
PTCD3-209ENST00000472044 NICN1Q9BSH3 213 aa2.68□□□□□ -1.98
PTCD3-209ENST00000472044 CRACR2AQ9BSW2 395 aa2.68□□□□□ -1.98
PTCD3-209ENST00000472044 PTGES2Q9H7Z7 377 aa2.68□□□□□ -1.98
PTCD3-209ENST00000472044 ISG20L2Q9H9L3 353 aaKnown RBP2.68□□□□□ -1.98
PTCD3-209ENST00000472044 SLC17A5Q9NRA2 495 aa2.68□□□□□ -1.98
PTCD3-209ENST00000472044 MARCH5Q9NX47 278 aa2.68□□□□□ -1.98
PTCD3-209ENST00000472044 UBQLN1Q9UMX0 589 aaKnown RBP2.68□□□□□ -1.98
PTCD3-209ENST00000472044 ABCG2Q9UNQ0 655 aa2.68□□□□□ -1.98
PTCD3-209ENST00000472044 AK6Q9Y3D8 172 aaKnown RBP2.68□□□□□ -1.98
PTCD3-209ENST00000472044 ATP10AO60312 1499 aa2.68□□□□□ -1.98
PTCD3-209ENST00000472044 ARHGAP23Q9P227 1491 aa2.68□□□□□ -1.98
PTCD3-209ENST00000472044 PTCH1Q13635 1447 aa2.68□□□□□ -1.98
PTCD3-209ENST00000472044 TDRD6O60522 2096 aaKnown RBP2.67□□□□□ -1.98
PTCD3-209ENST00000472044 PRRG1O14668 218 aa2.67□□□□□ -1.98
PTCD3-209ENST00000472044 ARPC3O15145 178 aa2.67□□□□□ -1.98
PTCD3-209ENST00000472044 GMFGO60234 142 aa2.67□□□□□ -1.98
PTCD3-209ENST00000472044 N4BP1O75113 896 aaKnown RBP2.67□□□□□ -1.98
PTCD3-209ENST00000472044 SLITRK3O94933 977 aa2.67□□□□□ -1.98
PTCD3-209ENST00000472044 LRATO95237 230 aa2.67□□□□□ -1.98
PTCD3-209ENST00000472044 PNMTP11086 282 aa2.67□□□□□ -1.98
PTCD3-209ENST00000472044 ZNF19P17023 458 aa2.67□□□□□ -1.98
PTCD3-209ENST00000472044 FGF9P31371 208 aaPredicted RBP2.67□□□□□ -1.98
PTCD3-209ENST00000472044 DAP3P51398 398 aaKnown RBP2.67□□□□□ -1.98
PTCD3-209ENST00000472044 STX17P56962 302 aa2.67□□□□□ -1.98
PTCD3-209ENST00000472044 MAP2K1Q02750 393 aaPredicted RBP2.67□□□□□ -1.98
PTCD3-209ENST00000472044 CCDC173Q0VFZ6 552 aa2.67□□□□□ -1.98
PTCD3-209ENST00000472044 C1orf61Q13536 156 aa2.67□□□□□ -1.98
PTCD3-209ENST00000472044 CCDC14Q49A88 953 aa2.67□□□□□ -1.98
PTCD3-209ENST00000472044 CCDC152Q4G0S7 254 aa2.67□□□□□ -1.98
PTCD3-209ENST00000472044 OTPQ5XKR4 325 aa2.67□□□□□ -1.98
PTCD3-209ENST00000472044 UNQ9370/PRO34162Q6UXP9 181 aa2.67□□□□□ -1.98
PTCD3-209ENST00000472044 NRMQ8IXM6 262 aa2.67□□□□□ -1.98
PTCD3-209ENST00000472044 OR4D9Q8NGE8 314 aa2.67□□□□□ -1.98
PTCD3-209ENST00000472044 OR52M1Q8NGK5 317 aa2.67□□□□□ -1.98
PTCD3-209ENST00000472044 C7orf33Q8WU49 177 aa2.67□□□□□ -1.98
PTCD3-209ENST00000472044 EDEM2Q9BV94 578 aa2.67□□□□□ -1.98
PTCD3-209ENST00000472044 SPATA16Q9BXB7 569 aa2.67□□□□□ -1.98
PTCD3-209ENST00000472044 ZDHHC11Q9H8X9 412 aa2.67□□□□□ -1.98
PTCD3-209ENST00000472044 UFSP2Q9NUQ7 469 aa2.67□□□□□ -1.98
PTCD3-209ENST00000472044 SMOXQ9NWM0 555 aa2.67□□□□□ -1.98
PTCD3-209ENST00000472044 C6orf203Q9P0P8 240 aaPredicted RBP2.67□□□□□ -1.98
PTCD3-209ENST00000472044 PHF11Q9UIL8 331 aa2.67□□□□□ -1.98
PTCD3-209ENST00000472044 SLCO1B1Q9Y6L6 691 aa2.67□□□□□ -1.98
PTCD3-209ENST00000472044 RLFQ13129 1914 aa2.67□□□□□ -1.98
PTCD3-209ENST00000472044 THSD7BQ9C0I4 1608 aa2.67□□□□□ -1.98
PTCD3-209ENST00000472044 CLSPNQ9HAW4 1339 aa2.67□□□□□ -1.98
PTCD3-209ENST00000472044 C15orf38-AP3S2A0A0A6YYH1 394 aa2.66□□□□□ -1.98
PTCD3-209ENST00000472044 LRP5LA4QPB2 252 aa2.66□□□□□ -1.98
PTCD3-209ENST00000472044 H0YCG3 227 aa2.66□□□□□ -1.98
PTCD3-209ENST00000472044 OR10H3O60404 316 aa2.66□□□□□ -1.98
PTCD3-209ENST00000472044 SNNO75324 88 aaPredicted RBP2.66□□□□□ -1.98
PTCD3-209ENST00000472044 BBOX1O75936 387 aa2.66□□□□□ -1.98
PTCD3-209ENST00000472044 DUX4L4P0CJ87 422 aa2.66□□□□□ -1.98
PTCD3-209ENST00000472044 PRG2P13727 222 aa2.66□□□□□ -1.98
PTCD3-209ENST00000472044 ZNF44P15621 663 aa2.66□□□□□ -1.98
PTCD3-209ENST00000472044 POLR2EP19388 210 aaKnown RBP2.66□□□□□ -1.98
PTCD3-209ENST00000472044 COX5AP20674 150 aa2.66□□□□□ -1.98
PTCD3-209ENST00000472044 IMPDH1P20839 514 aa2.66□□□□□ -1.98
PTCD3-209ENST00000472044 LEPP41159 167 aa2.66□□□□□ -1.98
PTCD3-209ENST00000472044 PTGDSP41222 190 aa2.66□□□□□ -1.98
PTCD3-209ENST00000472044 RPS14P62263 151 aaKnown RBP2.66□□□□□ -1.98
PTCD3-209ENST00000472044 KLF17Q5JT82 389 aaPredicted RBP2.66□□□□□ -1.98
PTCD3-209ENST00000472044 C10orf120Q5SQS8 335 aa2.66□□□□□ -1.98
PTCD3-209ENST00000472044 ATL3Q6DD88 541 aa2.66□□□□□ -1.98
PTCD3-209ENST00000472044 KRTAP5-1Q6L8H4 278 aa2.66□□□□□ -1.98
PTCD3-209ENST00000472044 ACOT7LQ6ZUV0 252 aa2.66□□□□□ -1.98
PTCD3-209ENST00000472044 GDPD3Q7L5L3 318 aa2.66□□□□□ -1.98
PTCD3-209ENST00000472044 NLRP9Q7RTR0 991 aa2.66□□□□□ -1.98
PTCD3-209ENST00000472044 ZNF100Q8IYN0 542 aa2.66□□□□□ -1.98
PTCD3-209ENST00000472044 CCDC71LQ8N9Z2 235 aa2.66□□□□□ -1.98
PTCD3-209ENST00000472044 OR2AP1Q8NGE2 309 aa2.66□□□□□ -1.98
PTCD3-209ENST00000472044 OR56B4Q8NH76 319 aa2.66□□□□□ -1.98
PTCD3-209ENST00000472044 SETD7Q8WTS6 366 aaKnown RBP2.66□□□□□ -1.98
PTCD3-209ENST00000472044 OR1E3Q8WZA6 343 aa2.66□□□□□ -1.98
PTCD3-209ENST00000472044 EFHD2Q96C19 240 aaPredicted RBP2.66□□□□□ -1.98
PTCD3-209ENST00000472044 COQ2Q96H96 371 aa2.66□□□□□ -1.98
PTCD3-209ENST00000472044 KLHDC3Q9BQ90 382 aa2.66□□□□□ -1.98
PTCD3-209ENST00000472044 NT5C3AQ9H0P0 336 aa2.66□□□□□ -1.98
PTCD3-209ENST00000472044 PDFQ9HBH1 243 aa2.66□□□□□ -1.98
PTCD3-209ENST00000472044 APMAPQ9HDC9 416 aa2.66□□□□□ -1.98
PTCD3-209ENST00000472044 PLSCR3Q9NRY6 295 aa2.66□□□□□ -1.98
PTCD3-209ENST00000472044 IL36GQ9NZH8 169 aa2.66□□□□□ -1.98
PTCD3-209ENST00000472044 CD274Q9NZQ7 290 aa2.66□□□□□ -1.98
PTCD3-209ENST00000472044 ADAM22Q9P0K1 906 aa2.66□□□□□ -1.98
PTCD3-209ENST00000472044 POLDIP2Q9Y2S7 368 aa2.66□□□□□ -1.98
PTCD3-209ENST00000472044 ATAD2BQ9ULI0 1458 aa2.65□□□□□ -1.98
PTCD3-209ENST00000472044 GTF3C1Q12789 2109 aa2.65□□□□□ -1.98
PTCD3-209ENST00000472044 FAM231BA6NCW3 169 aa2.65□□□□□ -1.99
PTCD3-209ENST00000472044 METTL21EPA6NDL7 271 aa2.65□□□□□ -1.99
PTCD3-209ENST00000472044 TRDCB7Z8K6 153 aa2.65□□□□□ -1.99
PTCD3-209ENST00000472044 F5H6K3 240 aa2.65□□□□□ -1.99
PTCD3-209ENST00000472044 KIF2AO00139 706 aaPredicted RBP2.65□□□□□ -1.99
PTCD3-209ENST00000472044 ZNF264O43296 627 aa2.65□□□□□ -1.99
PTCD3-209ENST00000472044 SNAPINO95295 136 aa2.65□□□□□ -1.99
PTCD3-209ENST00000472044 LGALS2P05162 132 aa2.65□□□□□ -1.99
PTCD3-209ENST00000472044 CAPN1P07384 714 aa2.65□□□□□ -1.99
PTCD3-209ENST00000472044 ELK1P19419 428 aa2.65□□□□□ -1.99
PTCD3-209ENST00000472044 GLRA2P23416 452 aa2.65□□□□□ -1.99
PTCD3-209ENST00000472044 GABRR1P24046 479 aa2.65□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 60.5 ms