RNA–Protein interactions for RNA: ENST00000471978.5

C9orf3-213, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 2

Gene C9orf3, Length 478 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-213ENST00000471978 E9PBE3 544 aa19.99■□□□□ 0.79
C9orf3-213ENST00000471978 BCAS1O75363 584 aaPredicted RBP19.99■□□□□ 0.79
C9orf3-213ENST00000471978 LY6G6DO95868 133 aa19.99■□□□□ 0.79
C9orf3-213ENST00000471978 PAX1P15863 534 aa19.99■□□□□ 0.79
C9orf3-213ENST00000471978 S100A3P33764 101 aa19.99■□□□□ 0.79
C9orf3-213ENST00000471978 DIO1P49895 249 aa19.99■□□□□ 0.79
C9orf3-213ENST00000471978 NME5P56597 212 aa19.99■□□□□ 0.79
C9orf3-213ENST00000471978 CSNK2A1P68400 391 aaPredicted RBP19.99■□□□□ 0.79
C9orf3-213ENST00000471978 BST1Q10588 318 aa19.99■□□□□ 0.79
C9orf3-213ENST00000471978 SYT14P1Q58G82 188 aa19.99■□□□□ 0.79
C9orf3-213ENST00000471978 FRRS1Q6ZNA5 592 aa19.99■□□□□ 0.79
C9orf3-213ENST00000471978 TMPPEQ6ZT21 453 aa19.99■□□□□ 0.79
C9orf3-213ENST00000471978 Q6ZT83 130 aa19.99■□□□□ 0.79
C9orf3-213ENST00000471978 ZNF563Q8TA94 476 aa19.99■□□□□ 0.79
C9orf3-213ENST00000471978 SLC25A43Q8WUT9 341 aaPredicted RBP19.99■□□□□ 0.79
C9orf3-213ENST00000471978 ZG16BQ96DA0 208 aa19.99■□□□□ 0.79
C9orf3-213ENST00000471978 ZNF300Q96RE9 604 aaPredicted RBP19.99■□□□□ 0.79
C9orf3-213ENST00000471978 USB1Q9BQ65 265 aaKnown RBP19.99■□□□□ 0.79
C9orf3-213ENST00000471978 SAP130Q9H0E3 1048 aa19.99■□□□□ 0.79
C9orf3-213ENST00000471978 ESRP2Q9H6T0 727 aaKnown RBP19.99■□□□□ 0.79
C9orf3-213ENST00000471978 PRSS50Q9UI38 385 aa19.99■□□□□ 0.79
C9orf3-213ENST00000471978 RNF115Q9Y4L5 304 aa19.99■□□□□ 0.79
C9orf3-213ENST00000471978 ZNF724A8MTY0 619 aa19.98■□□□□ 0.79
C9orf3-213ENST00000471978 SULT2B1O00204 365 aa19.98■□□□□ 0.79
C9orf3-213ENST00000471978 CLOCKO15516 846 aa19.98■□□□□ 0.79
C9orf3-213ENST00000471978 TMCC2O75069 709 aa19.98■□□□□ 0.79
C9orf3-213ENST00000471978 FESP07332 822 aa19.98■□□□□ 0.79
C9orf3-213ENST00000471978 CD3EP07766 207 aa19.98■□□□□ 0.79
C9orf3-213ENST00000471978 RYKP34925 604 aa19.98■□□□□ 0.79
C9orf3-213ENST00000471978 APOBEC1P41238 236 aaKnown RBP19.98■□□□□ 0.79
C9orf3-213ENST00000471978 HPCAP84074 193 aa19.98■□□□□ 0.79
C9orf3-213ENST00000471978 GPAT3Q53EU6 434 aa19.98■□□□□ 0.79
C9orf3-213ENST00000471978 NCMAPQ5T1S8 102 aa19.98■□□□□ 0.79
C9orf3-213ENST00000471978 AP1ARQ63HQ0 302 aa19.98■□□□□ 0.79
C9orf3-213ENST00000471978 OGFOD2Q6N063 350 aa19.98■□□□□ 0.79
C9orf3-213ENST00000471978 BHLHA15Q7RTS1 189 aaPredicted RBP19.98■□□□□ 0.79
C9orf3-213ENST00000471978 HMGN2P46Q86SG4 172 aa19.98■□□□□ 0.79
C9orf3-213ENST00000471978 TEX37Q96LM6 180 aa19.98■□□□□ 0.79
C9orf3-213ENST00000471978 CCDC115Q96NT0 180 aa19.98■□□□□ 0.79
C9orf3-213ENST00000471978 ZNF701Q9NV72 531 aaPredicted RBP19.98■□□□□ 0.79
C9orf3-213ENST00000471978 BTNL2Q9UIR0 455 aa19.98■□□□□ 0.79
C9orf3-213ENST00000471978 SPIN1Q9Y657 262 aaPredicted RBP19.98■□□□□ 0.79
C9orf3-213ENST00000471978 TLN2Q9Y4G6 2542 aa19.97■□□□□ 0.79
C9orf3-213ENST00000471978 LYZL6O75951 148 aa19.97■□□□□ 0.79
C9orf3-213ENST00000471978 CNOT4O95628 575 aaKnown RBP19.97■□□□□ 0.79
C9orf3-213ENST00000471978 ALDOCP09972 364 aaKnown RBP19.97■□□□□ 0.79
C9orf3-213ENST00000471978 TFPIP10646 304 aa19.97■□□□□ 0.79
C9orf3-213ENST00000471978 UFM1P61960 85 aa19.97■□□□□ 0.79
C9orf3-213ENST00000471978 KCNJ10P78508 379 aa19.97■□□□□ 0.79
C9orf3-213ENST00000471978 CHRNEQ04844 493 aa19.97■□□□□ 0.79
C9orf3-213ENST00000471978 HHATQ5VTY9 493 aa19.97■□□□□ 0.79
C9orf3-213ENST00000471978 ADAM5Q6NVV9 412 aa19.97■□□□□ 0.79
C9orf3-213ENST00000471978 ZC3HAV1Q7Z2W4 902 aaKnown RBP19.97■□□□□ 0.79
C9orf3-213ENST00000471978 GALNT5Q7Z7M9 940 aa19.97■□□□□ 0.79
C9orf3-213ENST00000471978 LILRB1Q8NHL6 650 aaPredicted RBP19.97■□□□□ 0.79
C9orf3-213ENST00000471978 ZNF75CPQ92670 426 aaPredicted RBP19.97■□□□□ 0.79
C9orf3-213ENST00000471978 CCDC106Q9BWC9 280 aa19.97■□□□□ 0.79
C9orf3-213ENST00000471978 POTEKPQ9BYX7 375 aa19.97■□□□□ 0.79
C9orf3-213ENST00000471978 CTPS2Q9NRF8 586 aa19.97■□□□□ 0.79
C9orf3-213ENST00000471978 ST6GALNAC1Q9NSC7 600 aaPredicted RBP19.97■□□□□ 0.79
C9orf3-213ENST00000471978 RAB21Q9UL25 225 aa19.97■□□□□ 0.79
C9orf3-213ENST00000471978 LAMP3Q9UQV4 416 aa19.97■□□□□ 0.79
C9orf3-213ENST00000471978 ABCA2Q9BZC7 2435 aa19.97■□□□□ 0.79
C9orf3-213ENST00000471978 USF3Q68DE3 2245 aa19.96■□□□□ 0.79
C9orf3-213ENST00000471978 PRAMEF27A3QJZ7 478 aa19.96■□□□□ 0.79
C9orf3-213ENST00000471978 HMGN4O00479 90 aa19.96■□□□□ 0.79
C9orf3-213ENST00000471978 SDHDO14521 159 aa19.96■□□□□ 0.79
C9orf3-213ENST00000471978 C1QCP02747 245 aa19.96■□□□□ 0.79
C9orf3-213ENST00000471978 EDNRAP25101 427 aa19.96■□□□□ 0.79
C9orf3-213ENST00000471978 ATP5J2P56134 94 aa19.96■□□□□ 0.79
C9orf3-213ENST00000471978 CROCCP2Q86T23 111 aa19.96■□□□□ 0.79
C9orf3-213ENST00000471978 MTDHQ86UE4 582 aaKnown RBP19.96■□□□□ 0.79
C9orf3-213ENST00000471978 RNF130Q86XS8 419 aa19.96■□□□□ 0.79
C9orf3-213ENST00000471978 ZNF100Q8IYN0 542 aa19.96■□□□□ 0.79
C9orf3-213ENST00000471978 ARFGAP2Q8N6H7 521 aa19.96■□□□□ 0.79
C9orf3-213ENST00000471978 ANKRD42Q8N9B4 389 aa19.96■□□□□ 0.79
C9orf3-213ENST00000471978 PIWIL2Q8TC59 973 aaKnown RBP19.96■□□□□ 0.79
C9orf3-213ENST00000471978 PANX1Q96RD7 426 aa19.96■□□□□ 0.79
C9orf3-213ENST00000471978 EXOSC3Q9NQT5 275 aaKnown RBP19.96■□□□□ 0.79
C9orf3-213ENST00000471978 AIG1Q9NVV5 245 aa19.96■□□□□ 0.79
C9orf3-213ENST00000471978 CHRNA9Q9UGM1 479 aa19.96■□□□□ 0.79
C9orf3-213ENST00000471978 CCDC154A6NI56 674 aa19.95■□□□□ 0.78
C9orf3-213ENST00000471978 CLDN24A6NM45 220 aa19.95■□□□□ 0.78
C9orf3-213ENST00000471978 STK11Q15831 433 aa19.95■□□□□ 0.78
C9orf3-213ENST00000471978 GRINAQ7Z429 371 aa19.95■□□□□ 0.78
C9orf3-213ENST00000471978 SPATA19Q7Z5L4 167 aa19.95■□□□□ 0.78
C9orf3-213ENST00000471978 ATG4DQ86TL0 474 aaPredicted RBP19.95■□□□□ 0.78
C9orf3-213ENST00000471978 TRIML2Q8N7C3 387 aa19.95■□□□□ 0.78
C9orf3-213ENST00000471978 ANKFN1Q8N957 763 aa19.95■□□□□ 0.78
C9orf3-213ENST00000471978 FBXW5Q969U6 566 aa19.95■□□□□ 0.78
C9orf3-213ENST00000471978 EMC3Q9P0I2 261 aa19.95■□□□□ 0.78
C9orf3-213ENST00000471978 FN1P02751 2386 aaKnown RBP19.95■□□□□ 0.78
C9orf3-213ENST00000471978 IL12AP29459 219 aa19.94■□□□□ 0.78
C9orf3-213ENST00000471978 RPS4XP62701 263 aaKnown RBP19.94■□□□□ 0.78
C9orf3-213ENST00000471978 PLAURQ03405 335 aa19.94■□□□□ 0.78
C9orf3-213ENST00000471978 BSPH1Q075Z2 132 aa19.94■□□□□ 0.78
C9orf3-213ENST00000471978 PDK3Q15120 406 aa19.94■□□□□ 0.78
C9orf3-213ENST00000471978 SYPL1Q16563 259 aa19.94■□□□□ 0.78
C9orf3-213ENST00000471978 ABLIM2Q6H8Q1 611 aa19.94■□□□□ 0.78
C9orf3-213ENST00000471978 SEZ6L2Q6UXD5 910 aa19.94■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms